Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP11_T7_K07
         (814 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81082-3|CAB03095.2|  603|Caenorhabditis elegans Hypothetical pr...    31   0.98 
AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ...    28   6.9  
Z68220-10|CAA92491.2| 1843|Caenorhabditis elegans Hypothetical p...    28   9.1  

>Z81082-3|CAB03095.2|  603|Caenorhabditis elegans Hypothetical
           protein F42G4.3a protein.
          Length = 603

 Score = 31.1 bits (67), Expect = 0.98
 Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 7/87 (8%)
 Frame = -1

Query: 667 IKSPIPYTNHPRLNIHFHQSPDAV--LEGVRAGL---KXPXSSEAPSAYLTPSSLGM--X 509
           I SP  Y+N PR    FH+ P+A+   +  R  L     P S+ +P    + S+L     
Sbjct: 111 IPSPPTYSNQPRPLGDFHRDPNALSQFQQSREALLSSTSPTSNYSPINKFSSSTLTQYAN 170

Query: 508 KGVSPPYFQVNDESQASRLISRHSTHT 428
           K  SPP F  N  S+A+ +    S H+
Sbjct: 171 KSPSPPSFG-NSNSEATYVSPYSSKHS 196


>AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical
           protein Y53C10A.10 protein.
          Length = 1582

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 16/55 (29%), Positives = 24/55 (43%)
 Frame = -1

Query: 592 EGVRAGLKXPXSSEAPSAYLTPSSLGMXKGVSPPYFQVNDESQASRLISRHSTHT 428
           EG    ++   SS +PS + TP  +G    VS    Q +  S +S   +   T T
Sbjct: 734 EGTTLSIESTESSASPSDFTTPDFIGFTSSVSRTSEQYSSSSPSSDTTTMDVTST 788


>Z68220-10|CAA92491.2| 1843|Caenorhabditis elegans Hypothetical
           protein T20D3.11 protein.
          Length = 1843

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = -3

Query: 719 PYXSSHPPLRXRXHQPDHQIPDS 651
           P  S HPPL    H  +H  PD+
Sbjct: 66  PTSSHHPPLNSSSHHSNHNYPDT 88


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,902,135
Number of Sequences: 27780
Number of extensions: 297793
Number of successful extensions: 852
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 815
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 848
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1998381620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)