Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP11_T7_K06
(1116 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_03_0801 - 19828175-19828770,19828913-19828994 36 0.058
09_02_0495 + 9880714-9881196 36 0.077
07_03_1691 - 28726307-28726323,28726588-28726953,28727483-287275... 34 0.23
02_05_0962 + 33114226-33114684,33114806-33114853,33115166-331152... 32 0.94
01_03_0005 + 11568545-11569119,11569179-11569191 32 0.94
01_01_0553 - 4067921-4068180,4068437-4068455,4069101-4070225 32 0.94
07_03_1136 + 24218601-24218734,24218769-24219906 31 1.2
07_01_0080 + 587674-588510 25 2.2
04_04_1182 + 31531426-31531702,31533741-31533997,31534672-315348... 30 3.8
03_02_0455 - 8630543-8630893,8630994-8631068,8631149-8631223,863... 30 3.8
03_02_0178 + 6195402-6199158,6199438-6200003 30 3.8
10_08_0451 + 18033065-18033253,18033746-18033805,18034256-180343... 29 5.0
08_02_1049 + 23944526-23945473 29 5.0
06_03_1381 - 29754405-29754525,29754617-29754671,29755383-297554... 29 5.0
01_01_0796 + 6190931-6192745 24 5.7
12_02_1122 - 26244667-26245299 29 6.7
04_03_0977 + 21381857-21383757,21384299-21384458,21384669-213847... 29 6.7
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 29 6.7
01_01_0446 + 3321832-3322232,3322398-3322455,3322810-3323748,332... 29 6.7
12_02_0299 - 17051570-17052474,17053542-17053755 29 8.8
12_01_0667 + 5674322-5674393,5674455-5675159,5676051-5676087,567... 29 8.8
02_05_0686 - 30900748-30902167,30903442-30904742 29 8.8
01_01_0083 + 631196-631675 29 8.8
08_01_0207 - 1647168-1647251,1647583-1647726,1648176-1648287,164... 25 9.4
>04_03_0801 - 19828175-19828770,19828913-19828994
Length = 225
Score = 35.9 bits (79), Expect = 0.058
Identities = 20/52 (38%), Positives = 20/52 (38%), Gaps = 1/52 (1%)
Frame = +3
Query: 621 PPPXXGGXXPPPPPXKXGXXXXXXXFFFXFXGG-GXGGGGXXXXXXXPPPPP 773
P P GG PPPP K G G G GGGG PPP P
Sbjct: 147 PKPCCGGCVPPPPRCKCGVDGCGGGCSGGHGGECGGGGGGCKKPCCSPPPCP 198
>09_02_0495 + 9880714-9881196
Length = 160
Score = 35.5 bits (78), Expect = 0.077
Identities = 21/54 (38%), Positives = 21/54 (38%), Gaps = 3/54 (5%)
Frame = +3
Query: 621 PPPXXGGXX---PPPPPXKXGXXXXXXXFFFXFXGGGXGGGGXXXXXXXPPPPP 773
PPP GG PPPPP GGG GG G PPPPP
Sbjct: 39 PPPIAGGAVNSYPPPPPAGSSSSSSS--------GGGDGGAGGLFGGTYPPPPP 84
>07_03_1691 -
28726307-28726323,28726588-28726953,28727483-28727567,
28728255-28728387,28729793-28730328
Length = 378
Score = 33.9 bits (74), Expect = 0.23
Identities = 17/42 (40%), Positives = 18/42 (42%)
Frame = -3
Query: 772 GGGGGXXXXXXXPPPPXPPPXKXKKXXXXXXXXPXXXGGGGG 647
GGGGG PPPP PPP + P G GGG
Sbjct: 34 GGGGGGAGPT--PPPPPPPPHHRRARSEVAFRFPDDLGLGGG 73
>02_05_0962 +
33114226-33114684,33114806-33114853,33115166-33115286,
33115760-33116008,33116149-33116302,33116493-33116985,
33117524-33117596,33118285-33118343
Length = 551
Score = 31.9 bits (69), Expect = 0.94
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = +3
Query: 714 GGGXGGGGXXXXXXXPPPPP 773
GGG GGGG PPPPP
Sbjct: 53 GGGGGGGGFLRLRSAPPPPP 72
>01_03_0005 + 11568545-11569119,11569179-11569191
Length = 195
Score = 31.9 bits (69), Expect = 0.94
Identities = 17/48 (35%), Positives = 17/48 (35%)
Frame = +3
Query: 627 PXXGGXXPPPPPXKXGXXXXXXXFFFXFXGGGXGGGGXXXXXXXPPPP 770
P PPPPP GGG GGGG PPPP
Sbjct: 49 PCNPSYYPPPPPPVVTPTPQCPPPPSYPSGGGGGGGGGTVMYTSPPPP 96
Score = 31.9 bits (69), Expect = 0.94
Identities = 17/51 (33%), Positives = 17/51 (33%)
Frame = -3
Query: 772 GGGGGXXXXXXXPPPPXPPPXKXKKXXXXXXXXPXXXGGGGGXXPPXXGGG 620
GGGGG PPPP P GGGGG GG
Sbjct: 81 GGGGGGTVMYTSPPPPYSGGGGGSSTGGGGIYYPPPTGGGGGGGGGWQQGG 131
Score = 28.7 bits (61), Expect = 8.8
Identities = 15/42 (35%), Positives = 16/42 (38%)
Frame = +3
Query: 648 PPPPPXKXGXXXXXXXFFFXFXGGGXGGGGXXXXXXXPPPPP 773
PPPPP + GG GGGG PPPP
Sbjct: 57 PPPPPVVTPTPQCPPPP--SYPSGGGGGGGGGTVMYTSPPPP 96
>01_01_0553 - 4067921-4068180,4068437-4068455,4069101-4070225
Length = 467
Score = 31.9 bits (69), Expect = 0.94
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = +3
Query: 714 GGGXGGGGXXXXXXXPPPPP 773
GGG GGGG PPPPP
Sbjct: 21 GGGGGGGGFSPTAAKPPPPP 40
Score = 28.7 bits (61), Expect = 8.8
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +3
Query: 714 GGGXGGGGXXXXXXXPPPPP 773
GGG GGGG PPPP
Sbjct: 20 GGGGGGGGGFSPTAAKPPPP 39
Score = 26.6 bits (56), Expect(2) = 7.6
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -3
Query: 772 GGGGGXXXXXXXPPPPXPP 716
GGGGG PPPP P
Sbjct: 24 GGGGGFSPTAAKPPPPPSP 42
Score = 20.6 bits (41), Expect(2) = 7.6
Identities = 6/7 (85%), Positives = 6/7 (85%)
Frame = -3
Query: 733 PPPXPPP 713
PPP PPP
Sbjct: 57 PPPPPPP 63
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 31.5 bits (68), Expect = 1.2
Identities = 15/43 (34%), Positives = 17/43 (39%)
Frame = -3
Query: 673 PXXXGGGGGXXPPXXGGGXKKKKXKKXXXXXXGGXKXXXXXGG 545
P GGGGG PP GGG ++ GG GG
Sbjct: 121 PPGAGGGGGARPPAPGGGGGGGAPRRVLGGGGGGGALARPPGG 163
Score = 29.1 bits (62), Expect = 6.7
Identities = 30/121 (24%), Positives = 33/121 (27%), Gaps = 1/121 (0%)
Frame = -3
Query: 727 PXPPPXKXKKXXXXXXXXPXXXGGGGGXXPPXXGGGXKKKKXKKXXXXXXGGXKXXXXXG 548
P P P K P GGGG PP GGG G G
Sbjct: 80 PRPLPIKLLGLPPGGGGAPGPLGGGGA-RPPGGGGGGGPPSLPPGAGGGGGARPPAPGGG 138
Query: 547 GXXXXXKK-XGGXKXXXXXXXPPXKKKKXXGGXXPFXWGGXXXXXXFPPXXFFXKGGGXX 371
G ++ GG PP + G P GG P GGG
Sbjct: 139 GGGGAPRRVLGGGGGGGALARPPGGGRGGALGRPPGGGGGGGGPGRAPGGG----GGGGG 194
Query: 370 P 368
P
Sbjct: 195 P 195
>07_01_0080 + 587674-588510
Length = 278
Score = 25.4 bits (53), Expect(2) = 2.2
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = -3
Query: 763 GGXXXXXXXPPPPXPPP 713
GG PPPP PPP
Sbjct: 83 GGDGMFRRPPPPPPPPP 99
Score = 23.8 bits (49), Expect(2) = 2.2
Identities = 10/30 (33%), Positives = 10/30 (33%)
Frame = -3
Query: 736 PPPPXPPPXKXKKXXXXXXXXPXXXGGGGG 647
PPPP PPP P G G
Sbjct: 109 PPPPPPPPPPPPPLFTRRSHAPQDNSSGTG 138
>04_04_1182 +
31531426-31531702,31533741-31533997,31534672-31534818,
31535974-31536111
Length = 272
Score = 29.9 bits (64), Expect = 3.8
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -2
Query: 770 GGGGGXXXXXXPPXPXPPPXKXKKK 696
GGGGG PP P PP K + K
Sbjct: 52 GGGGGGGGMGIPPRPPPPEIKVRVK 76
Score = 29.1 bits (62), Expect = 6.7
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +3
Query: 714 GGGXGGGGXXXXXXXPPPP 770
GGG GGGG PPPP
Sbjct: 51 GGGGGGGGGMGIPPRPPPP 69
>03_02_0455 -
8630543-8630893,8630994-8631068,8631149-8631223,
8631332-8631397,8631891-8631967,8632659-8633070
Length = 351
Score = 29.9 bits (64), Expect = 3.8
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +3
Query: 621 PPPXXGGXXPPPPP 662
PPP GG PPPPP
Sbjct: 296 PPPPVGGTQPPPPP 309
>03_02_0178 + 6195402-6199158,6199438-6200003
Length = 1440
Score = 29.9 bits (64), Expect = 3.8
Identities = 17/48 (35%), Positives = 18/48 (37%), Gaps = 3/48 (6%)
Frame = +3
Query: 639 GXXPPPPPXKXGXXXXXXXFF---FXFXGGGXGGGGXXXXXXXPPPPP 773
G PPPPP + F F GGG GGGG P P
Sbjct: 22 GPPPPPPPPRRRPGDYDGDGFDRRKGFGGGGGGGGGFYDHRYRESPSP 69
>10_08_0451 +
18033065-18033253,18033746-18033805,18034256-18034324,
18034751-18034786,18035081-18035146,18035345-18035443,
18035543-18035620,18035724-18035802,18035999-18036093,
18036251-18036335,18036505-18036698,18036804-18036922,
18037015-18037057
Length = 403
Score = 29.5 bits (63), Expect = 5.0
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +3
Query: 717 GGXGGGGXXXXXXXPPPPP 773
GG GGGG PPPPP
Sbjct: 22 GGGGGGGMGSPPLGPPPPP 40
>08_02_1049 + 23944526-23945473
Length = 315
Score = 29.5 bits (63), Expect = 5.0
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -3
Query: 772 GGGGGXXXXXXXPPPPXPPP 713
GGGGG PPP PPP
Sbjct: 177 GGGGGFSGFAPRPPPQQPPP 196
>06_03_1381 -
29754405-29754525,29754617-29754671,29755383-29755440,
29755819-29755988,29756576-29756780
Length = 202
Score = 29.5 bits (63), Expect = 5.0
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +3
Query: 714 GGGXGGGGXXXXXXXPPPPP 773
GGG GG G PPPPP
Sbjct: 6 GGGGGGAGEARGADAPPPPP 25
>01_01_0796 + 6190931-6192745
Length = 604
Score = 23.8 bits (49), Expect(2) = 5.7
Identities = 9/19 (47%), Positives = 9/19 (47%)
Frame = -3
Query: 769 GGGGXXXXXXXPPPPXPPP 713
GG PPPP PPP
Sbjct: 182 GGKRPIQGSSVPPPPPPPP 200
Score = 23.8 bits (49), Expect(2) = 5.7
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -3
Query: 736 PPPPXPPPXKXKK 698
PPPP PPP + ++
Sbjct: 195 PPPPPPPPPQPEQ 207
>12_02_1122 - 26244667-26245299
Length = 210
Score = 29.1 bits (62), Expect = 6.7
Identities = 16/40 (40%), Positives = 17/40 (42%), Gaps = 1/40 (2%)
Frame = +3
Query: 621 PPPXXGGXXPPPPPXK-XGXXXXXXXFFFXFXGGGXGGGG 737
PPP GG P PP + G GGG GGGG
Sbjct: 28 PPPSPGGASPSIPPGRGGGGGTSGGDNNRGSRGGGNGGGG 67
>04_03_0977 +
21381857-21383757,21384299-21384458,21384669-21384717,
21385117-21385169
Length = 720
Score = 29.1 bits (62), Expect = 6.7
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -3
Query: 772 GGGGGXXXXXXXPPPPXPPP 713
G GGG PPPP PPP
Sbjct: 91 GVGGGGWVQLPPPPPPPPPP 110
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 29.1 bits (62), Expect = 6.7
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = +2
Query: 575 PPXXXXXLFXFFFFXXPPXXGGGXPPPPP 661
PP L + PP G G PPPPP
Sbjct: 1085 PPPLPPTLGDYGVAPPPPSIGAGAPPPPP 1113
Score = 29.1 bits (62), Expect = 6.7
Identities = 22/78 (28%), Positives = 22/78 (28%), Gaps = 2/78 (2%)
Frame = +2
Query: 542 PXPPXXXXFXXPPXXXXXLFXFFFFXXPPXXGG--GXPPPPPXXXXXXXXXXXXFFXFXG 715
P PP PP L PP G G PPPPP F G
Sbjct: 1112 PPPPGGITGVPPPPPIGGLGGHQAPPAPPLPEGIGGVPPPPPVGGLGGPPAPPPPAGFRG 1171
Query: 716 GGXXGXGGXXXXXXPPPP 769
G PPPP
Sbjct: 1172 GTPPPNAHGGVAPPPPPP 1189
Score = 28.7 bits (61), Expect = 8.8
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +3
Query: 621 PPPXXGGXXPPPPPXKXG 674
PPP G PPPPP G
Sbjct: 1100 PPPSIGAGAPPPPPPPGG 1117
>01_01_0446 +
3321832-3322232,3322398-3322455,3322810-3323748,
3324504-3324654,3324740-3324818,3325826-3325934
Length = 578
Score = 29.1 bits (62), Expect = 6.7
Identities = 17/50 (34%), Positives = 17/50 (34%)
Frame = -3
Query: 772 GGGGGXXXXXXXPPPPXPPPXKXKKXXXXXXXXPXXXGGGGGXXPPXXGG 623
GGG G PPP PP P GG GG P GG
Sbjct: 344 GGGPGSYPPSYGAPPPNPP-YSGGAPGGQGSLPPSYDGGYGGRPMPGGGG 392
>12_02_0299 - 17051570-17052474,17053542-17053755
Length = 372
Score = 28.7 bits (61), Expect = 8.8
Identities = 16/48 (33%), Positives = 16/48 (33%)
Frame = +2
Query: 518 PXFFXXXXPXPPXXXXFXXPPXXXXXLFXFFFFXXPPXXGGGXPPPPP 661
P F PP F PP F F PP PPPPP
Sbjct: 246 PIPFLTPPSPPPPAFPFPLPPWPWAPPPAFPFPHLPPIFSPPSPPPPP 293
>12_01_0667 +
5674322-5674393,5674455-5675159,5676051-5676087,
5676238-5676335,5676452-5676475
Length = 311
Score = 28.7 bits (61), Expect = 8.8
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +3
Query: 714 GGGXGGGGXXXXXXXPPPPP 773
GGG GGGG PP PP
Sbjct: 50 GGGGGGGGMNGRHMSPPTPP 69
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 28.7 bits (61), Expect = 8.8
Identities = 15/43 (34%), Positives = 16/43 (37%), Gaps = 2/43 (4%)
Frame = -3
Query: 736 PPPPX--PPPXKXKKXXXXXXXXPXXXGGGGGXXPPXXGGGXK 614
PPPP PPP K P GG PP GG +
Sbjct: 346 PPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPPPPKGGASR 388
>01_01_0083 + 631196-631675
Length = 159
Score = 28.7 bits (61), Expect = 8.8
Identities = 16/50 (32%), Positives = 18/50 (36%)
Frame = +1
Query: 622 PPPXGGGXXPPPPXXKXGXXXXXXXFFXFXXGGGXGXGGXXXXXXPPPPP 771
PP PPP G ++ GGG G GG PPP P
Sbjct: 68 PPSSSSYWNYPPPQ---GGGGGYIPYYQPPAGGGGGGGGFNYPAPPPPNP 114
>08_01_0207 -
1647168-1647251,1647583-1647726,1648176-1648287,
1648392-1648573,1648649-1648780,1648900-1649856,
1649949-1650734
Length = 798
Score = 24.6 bits (51), Expect(2) = 9.4
Identities = 9/20 (45%), Positives = 9/20 (45%)
Frame = -3
Query: 772 GGGGGXXXXXXXPPPPXPPP 713
G G PPPP PPP
Sbjct: 499 GPSNGSAANPPKPPPPPPPP 518
Score = 22.2 bits (45), Expect(2) = 9.4
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -3
Query: 733 PPPXPPPXK 707
PPP PPP K
Sbjct: 511 PPPPPPPPK 519
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,311,420
Number of Sequences: 37544
Number of extensions: 729376
Number of successful extensions: 8949
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 2436
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6759
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3363032448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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