Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP11_T7_K06
(1116 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 32 1e-04
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 35 0.12
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 35 0.12
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 31 1.5
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 31 1.5
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 31 1.5
Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical pr... 31 1.9
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 31 1.9
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 31 1.9
AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like ... 31 1.9
AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like ... 31 1.9
U23147-1|AAC46692.2| 674|Caenorhabditis elegans Hypothetical pr... 30 3.4
AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like ... 30 3.4
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 30 3.4
Z81088-5|CAB03133.1| 215|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z77662-15|CAI79240.1| 255|Caenorhabditis elegans Hypothetical p... 29 4.5
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 4.5
X74838-1|CAA52832.1| 231|Caenorhabditis elegans cuticlin 2 prot... 29 4.5
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 4.5
AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical ... 29 4.5
Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical pr... 29 6.0
U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical pr... 29 6.0
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 6.0
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 6.0
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 6.0
Z81592-8|CAB04730.1| 365|Caenorhabditis elegans Hypothetical pr... 29 7.9
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 29 7.9
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 29 7.9
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 31.9 bits (69), Expect = 0.84
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = +3
Query: 714 GGGXGGGGXXXXXXXPPPPP 773
GGG GGGG PPPPP
Sbjct: 39 GGGCGGGGGCGGGCAPPPPP 58
Score = 31.9 bits (69), Expect(2) = 1e-04
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = +3
Query: 636 GGXXPPPPPXKXGXXXXXXXFFFXFXGGGXGGGG 737
GG PPPPP G GGG GGGG
Sbjct: 50 GGCAPPPPPPACGGGCGGGGGGCGGGGGGCGGGG 83
Score = 31.9 bits (69), Expect(2) = 1e-04
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = +3
Query: 714 GGGXGGGGXXXXXXXPPPPP 773
GGG GGGG PPPPP
Sbjct: 96 GGGCGGGGGCGGGCAPPPPP 115
Score = 30.3 bits (65), Expect = 2.6
Identities = 18/50 (36%), Positives = 18/50 (36%)
Frame = -3
Query: 769 GGGGXXXXXXXPPPPXPPPXKXKKXXXXXXXXPXXXGGGGGXXPPXXGGG 620
GGGG PPPP PP GGGGG GGG
Sbjct: 100 GGGGGCGGGCAPPPP-PPACGGGCGGGGGGCGGGCGGGGGGGCGGGGGGG 148
Score = 29.1 bits (62), Expect = 6.0
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = +3
Query: 636 GGXXPPPPPXKXGXXXXXXXFFFXFXGGGXGGGG 737
GG PPPPP G GGG GGGG
Sbjct: 107 GGCAPPPPPPACGGGCGGGG---GGCGGGCGGGG 137
Score = 28.7 bits (61), Expect = 7.9
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = +1
Query: 634 GGGXXPPPPXXKXGXXXXXXXFFXFXXGGGXGXGG 738
GGG PPPP G GGG G GG
Sbjct: 49 GGGCAPPPPPPACGGGCGGGGGGCGGGGGGCGGGG 83
Score = 28.7 bits (61), Expect = 7.9
Identities = 17/51 (33%), Positives = 17/51 (33%)
Frame = -3
Query: 772 GGGGGXXXXXXXPPPPXPPPXKXKKXXXXXXXXPXXXGGGGGXXPPXXGGG 620
GG GG PP PPP GGGGG GGG
Sbjct: 97 GGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGCGGGGGGGCGGGGGG 147
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 34.7 bits (76), Expect = 0.12
Identities = 17/50 (34%), Positives = 17/50 (34%)
Frame = -3
Query: 769 GGGGXXXXXXXPPPPXPPPXKXKKXXXXXXXXPXXXGGGGGXXPPXXGGG 620
GGGG PPPP PPP GGG GGG
Sbjct: 291 GGGGYSAPAAAPPPPPPPPPPPAPAPVSSGGGYSEQSSGGGGGSSYSGGG 340
Score = 33.5 bits (73), Expect = 0.28
Identities = 17/50 (34%), Positives = 17/50 (34%)
Frame = -3
Query: 772 GGGGGXXXXXXXPPPPXPPPXKXKKXXXXXXXXPXXXGGGGGXXPPXXGG 623
GGGG PPPP PPP GGGG GG
Sbjct: 291 GGGGYSAPAAAPPPPPPPPPPPAPAPVSSGGGYSEQSSGGGGGSSYSGGG 340
Score = 27.1 bits (57), Expect(2) = 3.0
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +3
Query: 717 GGXGGGGXXXXXXXPPPPP 773
G GGGG PPPPP
Sbjct: 288 GSSGGGGYSAPAAAPPPPP 306
Score = 25.0 bits (52), Expect(2) = 2.3
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +3
Query: 714 GGGXGGGGXXXXXXXPPPPP 773
GGG GGG PPP P
Sbjct: 35 GGGCGGGCGGGGGCAPPPAP 54
Score = 23.8 bits (49), Expect(2) = 2.3
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +3
Query: 696 FFFXFXGGGXGGGG 737
F F GGG GGGG
Sbjct: 20 FLFPSAGGGGGGGG 33
Score = 21.4 bits (43), Expect(2) = 3.0
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +3
Query: 708 FXGGGXGGGG 737
+ GGG GGGG
Sbjct: 272 YAGGGGGGGG 281
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 34.7 bits (76), Expect = 0.12
Identities = 17/50 (34%), Positives = 17/50 (34%)
Frame = -3
Query: 769 GGGGXXXXXXXPPPPXPPPXKXKKXXXXXXXXPXXXGGGGGXXPPXXGGG 620
GGGG PPPP PPP GGG GGG
Sbjct: 291 GGGGYSAPAAAPPPPPPPPPPPAPAPVSSGGGYSEQSSGGGGGSSYSGGG 340
Score = 33.5 bits (73), Expect = 0.28
Identities = 17/50 (34%), Positives = 17/50 (34%)
Frame = -3
Query: 772 GGGGGXXXXXXXPPPPXPPPXKXKKXXXXXXXXPXXXGGGGGXXPPXXGG 623
GGGG PPPP PPP GGGG GG
Sbjct: 291 GGGGYSAPAAAPPPPPPPPPPPAPAPVSSGGGYSEQSSGGGGGSSYSGGG 340
Score = 27.1 bits (57), Expect(2) = 3.0
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +3
Query: 717 GGXGGGGXXXXXXXPPPPP 773
G GGGG PPPPP
Sbjct: 288 GSSGGGGYSAPAAAPPPPP 306
Score = 25.0 bits (52), Expect(2) = 2.3
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +3
Query: 714 GGGXGGGGXXXXXXXPPPPP 773
GGG GGG PPP P
Sbjct: 35 GGGCGGGCGGGGGCAPPPAP 54
Score = 23.8 bits (49), Expect(2) = 2.3
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +3
Query: 696 FFFXFXGGGXGGGG 737
F F GGG GGGG
Sbjct: 20 FLFPSAGGGGGGGG 33
Score = 21.4 bits (43), Expect(2) = 3.0
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +3
Query: 708 FXGGGXGGGG 737
+ GGG GGGG
Sbjct: 272 YAGGGGGGGG 281
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.1 bits (67), Expect = 1.5
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +3
Query: 621 PPPXXGGXXPPPPPXKXG 674
PPP GG PPPPP G
Sbjct: 761 PPPPPGGCPPPPPPPPPG 778
Score = 29.1 bits (62), Expect = 6.0
Identities = 17/50 (34%), Positives = 17/50 (34%)
Frame = -3
Query: 763 GGXXXXXXXPPPPXPPPXKXKKXXXXXXXXPXXXGGGGGXXPPXXGGGXK 614
GG PPPP PPP P GG PP GG K
Sbjct: 733 GGLPPITGGPPPP-PPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFK 781
Score = 28.7 bits (61), Expect = 7.9
Identities = 15/43 (34%), Positives = 15/43 (34%)
Frame = +1
Query: 547 PPXXXXFXXPPXXXXXPFFXFFFXXPPPXGGGXXPPPPXXKXG 675
PP PP P PPP GG PPPP G
Sbjct: 736 PPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPG 778
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.1 bits (67), Expect = 1.5
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +3
Query: 621 PPPXXGGXXPPPPPXKXG 674
PPP GG PPPPP G
Sbjct: 761 PPPPPGGCPPPPPPPPPG 778
Score = 29.1 bits (62), Expect = 6.0
Identities = 17/50 (34%), Positives = 17/50 (34%)
Frame = -3
Query: 763 GGXXXXXXXPPPPXPPPXKXKKXXXXXXXXPXXXGGGGGXXPPXXGGGXK 614
GG PPPP PPP P GG PP GG K
Sbjct: 733 GGLPPITGGPPPP-PPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFK 781
Score = 28.7 bits (61), Expect = 7.9
Identities = 15/43 (34%), Positives = 15/43 (34%)
Frame = +1
Query: 547 PPXXXXFXXPPXXXXXPFFXFFFXXPPPXGGGXXPPPPXXKXG 675
PP PP P PPP GG PPPP G
Sbjct: 736 PPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPG 778
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.1 bits (67), Expect = 1.5
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +3
Query: 621 PPPXXGGXXPPPPPXKXG 674
PPP GG PPPPP G
Sbjct: 344 PPPPPGGCPPPPPPPPPG 361
Score = 29.1 bits (62), Expect = 6.0
Identities = 17/50 (34%), Positives = 17/50 (34%)
Frame = -3
Query: 763 GGXXXXXXXPPPPXPPPXKXKKXXXXXXXXPXXXGGGGGXXPPXXGGGXK 614
GG PPPP PPP P GG PP GG K
Sbjct: 316 GGLPPITGGPPPP-PPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFK 364
Score = 28.7 bits (61), Expect = 7.9
Identities = 15/43 (34%), Positives = 15/43 (34%)
Frame = +1
Query: 547 PPXXXXFXXPPXXXXXPFFXFFFXXPPPXGGGXXPPPPXXKXG 675
PP PP P PPP GG PPPP G
Sbjct: 319 PPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPG 361
>Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical
protein F53F1.4 protein.
Length = 105
Score = 30.7 bits (66), Expect = 1.9
Identities = 18/55 (32%), Positives = 20/55 (36%), Gaps = 6/55 (10%)
Frame = -3
Query: 772 GGGGGXXXXXXXPPPPXP------PPXKXKKXXXXXXXXPXXXGGGGGXXPPXXG 626
GGGGG PPPP PP + + P GGG G P G
Sbjct: 22 GGGGGCGCAPPPPPPPCGCGGPSLPPLQLPRFELPRLSLPSFGGGGCGGPAPCGG 76
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 30.7 bits (66), Expect = 1.9
Identities = 18/54 (33%), Positives = 18/54 (33%)
Frame = +3
Query: 612 FFXPPPXXGGXXPPPPPXKXGXXXXXXXFFFXFXGGGXGGGGXXXXXXXPPPPP 773
F PPP GG PPPP G GG PPPPP
Sbjct: 73 FIPPPPGPGGIPPPPPMFAGGIPPPPPMM------GGIPPPPPMFGAPPPPPPP 120
Score = 29.5 bits (63), Expect = 4.5
Identities = 16/43 (37%), Positives = 16/43 (37%), Gaps = 5/43 (11%)
Frame = +1
Query: 547 PPXXXXFXXPPXXXXX-----PFFXFFFXXPPPXGGGXXPPPP 660
PP F PP P F PPP GG PPPP
Sbjct: 67 PPVPNGFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPP 109
Score = 29.1 bits (62), Expect = 6.0
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +3
Query: 612 FFXPPPXXGGXXPPPP 659
FF PPP G PPPP
Sbjct: 63 FFIPPPVPNGFIPPPP 78
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 30.7 bits (66), Expect = 1.9
Identities = 14/28 (50%), Positives = 14/28 (50%), Gaps = 2/28 (7%)
Frame = +3
Query: 696 FFFXFXGGGXGGGG--XXXXXXXPPPPP 773
F F GGG GGGG PPPPP
Sbjct: 18 FLFPMAGGGGGGGGCAPAAPACAPPPPP 45
>AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform b protein.
Length = 453
Score = 30.7 bits (66), Expect = 1.9
Identities = 19/51 (37%), Positives = 19/51 (37%)
Frame = -3
Query: 772 GGGGGXXXXXXXPPPPXPPPXKXKKXXXXXXXXPXXXGGGGGXXPPXXGGG 620
GGGGG PPP PPP P GGG G P G G
Sbjct: 50 GGGGGSYAAAPALPPPPPPP-------------PAPIGGGAGYAAPFGGPG 87
>AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform a protein.
Length = 393
Score = 30.7 bits (66), Expect = 1.9
Identities = 19/51 (37%), Positives = 19/51 (37%)
Frame = -3
Query: 772 GGGGGXXXXXXXPPPPXPPPXKXKKXXXXXXXXPXXXGGGGGXXPPXXGGG 620
GGGGG PPP PPP P GGG G P G G
Sbjct: 50 GGGGGSYAAAPALPPPPPPP-------------PAPIGGGAGYAAPFGGPG 87
>U23147-1|AAC46692.2| 674|Caenorhabditis elegans Hypothetical
protein C18H9.8 protein.
Length = 674
Score = 29.9 bits (64), Expect = 3.4
Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = -3
Query: 97 IPPXQXGGPP-KXPLXRXGTPPRXFXNFG 14
+PP + GGPP P+ R G PPR + G
Sbjct: 115 VPPSRSGGPPAPMPVSRAGGPPRAPTSMG 143
>AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like
(grd related) protein29 protein.
Length = 172
Score = 29.9 bits (64), Expect = 3.4
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +1
Query: 706 FXXGGGXGXGGXXXXXXPPPPP 771
+ GGG G GG PPPPP
Sbjct: 49 YGGGGGCGYGGGYGCGIPPPPP 70
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 29.9 bits (64), Expect = 3.4
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +3
Query: 621 PPPXXGGXXPPPPP 662
PPP GG PPPPP
Sbjct: 582 PPPMLGGPPPPPPP 595
>Z81088-5|CAB03133.1| 215|Caenorhabditis elegans Hypothetical
protein F53F1.5 protein.
Length = 215
Score = 29.5 bits (63), Expect = 4.5
Identities = 17/51 (33%), Positives = 19/51 (37%), Gaps = 6/51 (11%)
Frame = -3
Query: 772 GGGGGXXXXXXXPPPPXP------PPXKXKKXXXXXXXXPXXXGGGGGXXP 638
GGGGG PPPP PP + + P GG GG P
Sbjct: 22 GGGGGCGCAPPPPPPPCGCGAPALPPLQLPRFELPRLSLPSLGGGCGGPAP 72
>Z77662-15|CAI79240.1| 255|Caenorhabditis elegans Hypothetical
protein F47B8.14 protein.
Length = 255
Score = 29.5 bits (63), Expect = 4.5
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +3
Query: 714 GGGXGGGGXXXXXXXPPPPP 773
GGG GGG PPPPP
Sbjct: 26 GGGYSGGGGGGGDAAPPPPP 45
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.5 bits (63), Expect = 4.5
Identities = 16/51 (31%), Positives = 16/51 (31%)
Frame = +3
Query: 621 PPPXXGGXXPPPPPXKXGXXXXXXXFFFXFXGGGXGGGGXXXXXXXPPPPP 773
PPP G PPPPP G G PPPPP
Sbjct: 288 PPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPP 338
>X74838-1|CAA52832.1| 231|Caenorhabditis elegans cuticlin 2
protein.
Length = 231
Score = 29.5 bits (63), Expect = 4.5
Identities = 17/51 (33%), Positives = 19/51 (37%), Gaps = 6/51 (11%)
Frame = -3
Query: 772 GGGGGXXXXXXXPPPPXP------PPXKXKKXXXXXXXXPXXXGGGGGXXP 638
GGGGG PPPP PP + + P GG GG P
Sbjct: 22 GGGGGCGCAPPPPPPPCGCGAPALPPLQLPRFELPRLSLPSLGGGCGGPAP 72
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.5 bits (63), Expect = 4.5
Identities = 16/51 (31%), Positives = 16/51 (31%)
Frame = +3
Query: 621 PPPXXGGXXPPPPPXKXGXXXXXXXFFFXFXGGGXGGGGXXXXXXXPPPPP 773
PPP G PPPPP G G PPPPP
Sbjct: 298 PPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPP 348
>AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical
protein Y53G8AR.9 protein.
Length = 315
Score = 29.5 bits (63), Expect = 4.5
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +3
Query: 714 GGGXGGGGXXXXXXXPPPPP 773
GGG GG G PPPPP
Sbjct: 198 GGGSGGSGGGSGRFPPPPPP 217
>Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical
protein T04F8.8 protein.
Length = 165
Score = 29.1 bits (62), Expect = 6.0
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +3
Query: 708 FXGGGXGGGGXXXXXXXPPPPP 773
+ GGG GG G PPPPP
Sbjct: 81 YGGGGGGGYGRPQGYVPPPPPP 102
Score = 29.1 bits (62), Expect = 6.0
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -3
Query: 772 GGGGGXXXXXXXPPPPXPPP 713
GGGGG PPP PPP
Sbjct: 84 GGGGGYGRPQGYVPPPPPPP 103
>U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical
protein F41F3.3 protein.
Length = 156
Score = 29.1 bits (62), Expect = 6.0
Identities = 20/56 (35%), Positives = 20/56 (35%), Gaps = 6/56 (10%)
Frame = -3
Query: 769 GGGGXXXXXXXPPPPXPPPXKXKKXXXXXXXXP---XXXGGGGGXXP---PXXGGG 620
GGGG PPPP P P GGGGG P P GGG
Sbjct: 22 GGGGGCGCAPPPPPPSPCGCGGGGGLALPQLPPLSLPSLGGGGGCCPPPAPACGGG 77
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.1 bits (62), Expect = 6.0
Identities = 16/51 (31%), Positives = 17/51 (33%)
Frame = +3
Query: 621 PPPXXGGXXPPPPPXKXGXXXXXXXFFFXFXGGGXGGGGXXXXXXXPPPPP 773
PPP G PPPPP + GG PPPPP
Sbjct: 289 PPPPRAGSPPPPPPPRGSPPTG------SLPPPQAGGSPPPAGTGSPPPPP 333
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.1 bits (62), Expect = 6.0
Identities = 16/51 (31%), Positives = 17/51 (33%)
Frame = +3
Query: 621 PPPXXGGXXPPPPPXKXGXXXXXXXFFFXFXGGGXGGGGXXXXXXXPPPPP 773
PPP G PPPPP + GG PPPPP
Sbjct: 310 PPPPRAGSPPPPPPPRGSPPTG------SLPPPQAGGSPPPAGTGSPPPPP 354
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.1 bits (62), Expect = 6.0
Identities = 16/51 (31%), Positives = 17/51 (33%)
Frame = +3
Query: 621 PPPXXGGXXPPPPPXKXGXXXXXXXFFFXFXGGGXGGGGXXXXXXXPPPPP 773
PPP G PPPPP + GG PPPPP
Sbjct: 295 PPPPRAGSPPPPPPPRGSPPTG------SLPPPQAGGSPPPAGTGSPPPPP 339
>Z81592-8|CAB04730.1| 365|Caenorhabditis elegans Hypothetical
protein T16G1.8 protein.
Length = 365
Score = 28.7 bits (61), Expect = 7.9
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +3
Query: 702 FXFXGGGXGGGGXXXXXXXPPPPP 773
F F GG GGGG PPP P
Sbjct: 16 FQFMFGGSGGGGCGCPCPVPPPVP 39
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 28.7 bits (61), Expect = 7.9
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = +3
Query: 606 FFFFXPPPXXGGXXPPPPPXKXG 674
F FF PPP G PPPPP G
Sbjct: 293 FGFFPPPPR--GHFPPPPPHFMG 313
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 28.7 bits (61), Expect = 7.9
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = +3
Query: 606 FFFFXPPPXXGGXXPPPPPXKXG 674
F FF PPP G PPPPP G
Sbjct: 293 FGFFPPPPR--GHFPPPPPHFMG 313
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,358,857
Number of Sequences: 27780
Number of extensions: 386397
Number of successful extensions: 3449
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 691
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2039
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3005123904
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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