Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP11_T7_K05
(823 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 79 7e-15
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 79 7e-15
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 54 2e-07
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 51 2e-06
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 51 2e-06
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 51 2e-06
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 51 2e-06
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 51 2e-06
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 50 4e-06
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 50 4e-06
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 50 5e-06
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 49 9e-06
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 46 5e-05
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 46 5e-05
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 44 2e-04
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 44 3e-04
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 42 0.001
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 41 0.002
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 41 0.002
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 41 0.002
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 41 0.002
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 41 0.002
X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein ( Dros... 39 0.007
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 37 0.038
AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p pro... 35 0.12
X51967-1|CAA36225.1| 1057|Drosophila melanogaster protein ( Dros... 33 0.62
AY060997-1|AAL28545.1| 619|Drosophila melanogaster HL01392p pro... 30 3.3
AE014297-1191|AAF54549.3| 619|Drosophila melanogaster CG6544-PA... 30 3.3
L77907-1|AAC37264.1| 1883|Drosophila melanogaster chromodomain-h... 30 4.4
BT011071-1|AAR82736.1| 1645|Drosophila melanogaster SD21488p pro... 30 4.4
AY095039-1|AAM11367.1| 1710|Drosophila melanogaster LD28380p pro... 29 5.8
AE014134-2294|AAF53256.2| 1710|Drosophila melanogaster CG16972-P... 29 5.8
AY095050-1|AAM11378.1| 1101|Drosophila melanogaster LD39323p pro... 29 7.7
AE014297-4548|AAF57014.2| 539|Drosophila melanogaster CG11498-P... 29 7.7
AE014134-528|AAF51170.1| 1883|Drosophila melanogaster CG3733-PA ... 29 7.7
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 79.0 bits (186), Expect = 7e-15
Identities = 58/189 (30%), Positives = 92/189 (48%), Gaps = 12/189 (6%)
Frame = -3
Query: 554 ARVGERLKSYPSGSRAFWSLAKAAEGNFCRSSLPPLRKSDDSLAHSAKEKADLLVKLF-- 381
A+ +L+ S+ FW++ KA + + +P L K+D+ A S KEKA++L +F
Sbjct: 368 AKWNNKLQKLDKCSKPFWNITKAIKKR--KQIVPCLSKADEIYA-SGKEKANILADVFQL 424
Query: 380 --------ASNSTVDDGGATPPNIPRCDSSLPEIC-FTQCAVRRELRLLDVHKSSGPDGI 228
++ +T+D + +I +++ EIC T V ++ L KS G DGI
Sbjct: 425 KHNLTHSYSNQNTIDQVKISLQSIAETPNNIAEICRVTYPEVFSIVKALHTRKSPGIDGI 484
Query: 227 PAVVLKTCAPELTPALTRLYRLSYCANRVPSSWKTAHVHPIPKKGDRSD-PSSYRPIAIT 51
P + LK + + A P WK A + PI K G D P SYRPI++
Sbjct: 485 PNISLKNLPTSAINHIVNIANHCLQAGYFPRDWKIAKIVPILKPGKPPDNPESYRPISLL 544
Query: 50 SLLSKVMER 24
S LSK++E+
Sbjct: 545 SGLSKILEK 553
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 79.0 bits (186), Expect = 7e-15
Identities = 58/189 (30%), Positives = 92/189 (48%), Gaps = 12/189 (6%)
Frame = -3
Query: 554 ARVGERLKSYPSGSRAFWSLAKAAEGNFCRSSLPPLRKSDDSLAHSAKEKADLLVKLF-- 381
A+ +L+ S+ FW++ KA + + +P L K+D+ A S KEKA++L +F
Sbjct: 316 AKWNNKLQKLDKCSKPFWNITKAIKKR--KQIVPCLSKADEIYA-SGKEKANILADVFQL 372
Query: 380 --------ASNSTVDDGGATPPNIPRCDSSLPEIC-FTQCAVRRELRLLDVHKSSGPDGI 228
++ +T+D + +I +++ EIC T V ++ L KS G DGI
Sbjct: 373 KHNLTHSYSNQNTIDQVKISLQSIAETPNNIAEICRVTYPEVFSIVKALHTRKSPGIDGI 432
Query: 227 PAVVLKTCAPELTPALTRLYRLSYCANRVPSSWKTAHVHPIPKKGDRSD-PSSYRPIAIT 51
P + LK + + A P WK A + PI K G D P SYRPI++
Sbjct: 433 PNISLKNLPTSAINHIVNIANHCLQAGYFPRDWKIAKIVPILKPGKPPDNPESYRPISLL 492
Query: 50 SLLSKVMER 24
S LSK++E+
Sbjct: 493 SGLSKILEK 501
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 54.4 bits (125), Expect = 2e-07
Identities = 36/128 (28%), Positives = 57/128 (44%), Gaps = 1/128 (0%)
Frame = -3
Query: 404 ADLLVKLFASNSTVDDGGATPPNIPRCDSSLPEICFTQCAVRRELRLLDVHKSSGPDGIP 225
A+++ +LF S T+ PP S P C T C V + + +K+ G DGIP
Sbjct: 374 ANIVSELFPSQHTLWQPAVDPPA-----SDFP--CITSCEVVEAAKRIRPNKAPGIDGIP 426
Query: 224 AVVLKTCAPELTPALTRLYRLSYCANRVPSSWKTAHVHPIPK-KGDRSDPSSYRPIAITS 48
V++K A ++ P WK + + K KG + P SYRP+ +
Sbjct: 427 GVIVKAAATARPEVFRDTFQQCLLDGVFPKRWKKMKLVLLLKGKGPANVPRSYRPLCLLD 486
Query: 47 LLSKVMER 24
++ K+ ER
Sbjct: 487 IVGKLFER 494
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial
cds. ).
Length = 964
Score = 50.8 bits (116), Expect = 2e-06
Identities = 32/85 (37%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Frame = -3
Query: 275 ELRLLDVHKSSGPDGIPAVVLKTCAPELTPALTRLYRLSYCANRVPSSWKTAHVHPIPKK 96
E++ L K+ G D I ++KT + T L +Y P +WK A V I K
Sbjct: 373 EIKNLKNSKAPGKDLITNQLIKTLPTKATLYLILIYNSILRIGYYPDAWKHAQVKMILKP 432
Query: 95 GDR-SDPSSYRPIAITSLLSKVMER 24
G +DP SYRPI++ S LSK+ ER
Sbjct: 433 GKSVNDPKSYRPISLLSGLSKMFER 457
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 50.8 bits (116), Expect = 2e-06
Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Frame = -3
Query: 284 VRRELRLLDVHKSSGPDGIPAVVLKTCAPELTPALTRLYRLSYCANRVPSSWKTAHVHPI 105
+ E++ L K+ G D I ++KT + T L +Y P +WK A V I
Sbjct: 498 LNEEIKNLKNSKAPGKDLITNQLIKTLPTKATLYLILIYNSILRLGYYPEAWKHAQVKMI 557
Query: 104 PKKGDRS-DPSSYRPIAITSLLSKVMER 24
K G S +P SYRPI++ S LSK+ ER
Sbjct: 558 LKPGKSSNEPKSYRPISLLSGLSKMFER 585
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 50.8 bits (116), Expect = 2e-06
Identities = 32/85 (37%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Frame = -3
Query: 275 ELRLLDVHKSSGPDGIPAVVLKTCAPELTPALTRLYRLSYCANRVPSSWKTAHVHPIPKK 96
E++ L K+ G D I ++KT + T L +Y P +WK A V I K
Sbjct: 489 EIKNLKNSKAPGKDLITNQLIKTLPTKATLYLILIYNSILRIGYYPDAWKHAQVKMILKP 548
Query: 95 GDR-SDPSSYRPIAITSLLSKVMER 24
G +DP SYRPI++ S LSK+ ER
Sbjct: 549 GKSVNDPKSYRPISLLSGLSKMFER 573
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 50.8 bits (116), Expect = 2e-06
Identities = 32/85 (37%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Frame = -3
Query: 275 ELRLLDVHKSSGPDGIPAVVLKTCAPELTPALTRLYRLSYCANRVPSSWKTAHVHPIPKK 96
E++ L K+ G D I ++KT + T L +Y P +WK A V I K
Sbjct: 451 EIKNLKNSKAPGKDLITNQLIKTLPTKATLYLILIYNSILRIGYYPDAWKHAQVKMILKP 510
Query: 95 GDR-SDPSSYRPIAITSLLSKVMER 24
G +DP SYRPI++ S LSK+ ER
Sbjct: 511 GKSVNDPKSYRPISLLSGLSKMFER 535
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 50.8 bits (116), Expect = 2e-06
Identities = 32/85 (37%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Frame = -3
Query: 275 ELRLLDVHKSSGPDGIPAVVLKTCAPELTPALTRLYRLSYCANRVPSSWKTAHVHPIPKK 96
E++ L K+ G D I ++KT + T L +Y P +WK A V I K
Sbjct: 489 EIKNLKNSKAPGKDLITNQLIKTLPTKATLYLILIYNSILRIGYYPDAWKHAQVKMILKP 548
Query: 95 GDR-SDPSSYRPIAITSLLSKVMER 24
G +DP SYRPI++ S LSK+ ER
Sbjct: 549 GKSVNDPKSYRPISLLSGLSKMFER 573
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 50.0 bits (114), Expect = 4e-06
Identities = 31/85 (36%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Frame = -3
Query: 275 ELRLLDVHKSSGPDGIPAVVLKTCAPELTPALTRLYRLSYCANRVPSSWKTAHVHPIPKK 96
E++ L K+ G D I ++KT + T L +Y P +WK A V I K
Sbjct: 489 EIKNLKNSKAPGKDLITNQLIKTLPTKATLYLILIYNSILRLGYYPEAWKHAQVKMILKP 548
Query: 95 G-DRSDPSSYRPIAITSLLSKVMER 24
G ++P SYRPI++ S LSK+ ER
Sbjct: 549 GKSANEPRSYRPISLLSGLSKIFER 573
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 50.0 bits (114), Expect = 4e-06
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Frame = -3
Query: 251 KSSGPDGIPAVVLKTCAPELTPALTRLYRLSYCANRVPSSWKTAHVHPIPKKGDR-SDPS 75
KS G D + +LK +P L L ++ + P +W++A + PI K SD +
Sbjct: 452 KSPGADRVSYPMLKNLSPHLKTKLLDIFNQILTTGKYPHTWRSAIIIPISKPNKPPSDIN 511
Query: 74 SYRPIAITSLLSKVMER 24
SYRPI++ S L K +E+
Sbjct: 512 SYRPISLLSCLGKTLEK 528
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p
protein.
Length = 906
Score = 49.6 bits (113), Expect = 5e-06
Identities = 54/220 (24%), Positives = 84/220 (38%), Gaps = 8/220 (3%)
Frame = -3
Query: 659 ARRRQDPNISEERRKYNAASRSYKKVIAKAKSEHVARVGERLKSYPSGSRAFWSLAKAAE 480
A R QDP +R +N A++ + V+ + +S + + + W K+ +
Sbjct: 315 AIRSQDP---WDRLLWNRAAKQLRNVLRELRSNFFEQKLASMDYTVDAGYSLWKCTKSLK 371
Query: 479 GNFCRSSLPPLRKSDDSLAHSAKEKADLLVKLFASNSTVDDGGATPPNIPRCDS------ 318
R P+R LA + +E+A+ + T T DS
Sbjct: 372 RQPFRQV--PIRCPGGELAKNEEEQANCFANHLETRFTHFQFATTEQYQETLDSLETPLQ 429
Query: 317 -SLPEICFTQCAVRRELRLLDVHKSSGPDGIPAVVLKTCAPELTPALTRLYRLSYCANRV 141
SLP + ++ L + KS G D + LK L +Y
Sbjct: 430 MSLPIKPIRVEEIVEAIKSLPLKKSPGIDNVCNATLKALPVRAILYLALIYNAILRVQFF 489
Query: 140 PSSWKTAHVHPIPKKGDRSD-PSSYRPIAITSLLSKVMER 24
P WK A + I K G + P SYRPI++ S LSK+ ER
Sbjct: 490 PKQWKMAAILMIHKPGKPEESPESYRPISLLSSLSKLWER 529
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 48.8 bits (111), Expect = 9e-06
Identities = 31/85 (36%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Frame = -3
Query: 275 ELRLLDVHKSSGPDGIPAVVLKTCAPELTPALTRLYRLSYCANRVPSSWKTAHVHPIPKK 96
E++ L K+ G D I ++K + T L +Y P +WK A V I K
Sbjct: 489 EIKNLKNSKAPGKDLITNQLIKALPTKATLYLILIYNSILRIGYYPDAWKHAQVKMILKP 548
Query: 95 GDR-SDPSSYRPIAITSLLSKVMER 24
G +DP SYRPI++ S LSK+ ER
Sbjct: 549 GKSVNDPKSYRPISLLSGLSKMFER 573
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 46.4 bits (105), Expect = 5e-05
Identities = 42/149 (28%), Positives = 65/149 (43%), Gaps = 6/149 (4%)
Frame = -3
Query: 452 PLRKSDDSLAHSAKEKA----DLLVKLFASNSTVDDGGATPPNIPRCDSSLPEICFTQCA 285
PLR + S +E+A D L +F N + + P D P F C
Sbjct: 377 PLRSPSGTWFRSDEERASAFADHLQNVFRPNPSTNTFILPPLIAANLDPQEP-FEFRPCE 435
Query: 284 VRRELR-LLDVHKSSGPDGIPAVVLKTCAPELTPALTRLYRLSYCANRVPSSWKTAHVHP 108
+ + ++ L+ KS G D I +L + L+ P WK + +
Sbjct: 436 LAKVIKEQLNPRKSPGYDLITPRMLIELPKCAILHICLLFNAIAKLGYFPQKWKKSTIVM 495
Query: 107 IPKKG-DRSDPSSYRPIAITSLLSKVMER 24
IPK G D++ PSSYRPI++ + LSK+ E+
Sbjct: 496 IPKPGKDKTQPSSYRPISLLTCLSKLFEK 524
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p
protein.
Length = 888
Score = 46.4 bits (105), Expect = 5e-05
Identities = 42/149 (28%), Positives = 65/149 (43%), Gaps = 6/149 (4%)
Frame = -3
Query: 452 PLRKSDDSLAHSAKEKA----DLLVKLFASNSTVDDGGATPPNIPRCDSSLPEICFTQCA 285
PLR + S +E+A D L +F N + + P D P F C
Sbjct: 377 PLRSPSGTWFRSDEERACAFADHLQNVFRPNPSTNTFILPPLIAANLDPQEP-FEFRPCE 435
Query: 284 VRRELR-LLDVHKSSGPDGIPAVVLKTCAPELTPALTRLYRLSYCANRVPSSWKTAHVHP 108
+ + ++ L+ KS G D I +L + L+ P WK + +
Sbjct: 436 LAKVIKEQLNPRKSPGYDLITPRMLIELPKCAILHICLLFNAIAKLGYFPQKWKKSTIVM 495
Query: 107 IPKKG-DRSDPSSYRPIAITSLLSKVMER 24
IPK G D++ PSSYRPI++ + LSK+ E+
Sbjct: 496 IPKPGKDKTQPSSYRPISLLTCLSKLFEK 524
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 858
Score = 44.4 bits (100), Expect = 2e-04
Identities = 46/217 (21%), Positives = 84/217 (38%), Gaps = 6/217 (2%)
Frame = -3
Query: 656 RRRQDPNISEERRKYNAASRSYKKVIAKAKSEHVARVGERLKSYPSGSRAFWSLAKAAEG 477
R Q ++K A+R + + + + R E+L + ++ W
Sbjct: 313 REWQSSRSPTAKQKLKVATRKLANALKQEEDDDQRRYIEQLTPTGTKQKSLWRAHSTLRP 372
Query: 476 NFCRSSLPPLRKSDDSLAHSAKEKADL----LVKLFASNSTVDDGGATPPNIPRCDSSLP 309
++ P++ S A S +++A+ L +F N + R P
Sbjct: 373 P--TETVLPIKNSSGGWARSDEDRANTFAAHLQNVFTPNQATSTFALPSYPVNRHQQHTP 430
Query: 308 EICFTQCAVRRELR-LLDVHKSSGPDGIPAVVLKTCAPELTPALTRLYRLSYCANRVPSS 132
I F + + ++ L KS G D I ++ +T+L+ P
Sbjct: 431 -IVFRPKEITKIIKDNLSPKKSPGYDLITPEMIIQLPHSAVRYITKLFNAITKLGYFPQR 489
Query: 131 WKTAHVHPIPKKG-DRSDPSSYRPIAITSLLSKVMER 24
WK + IPK G + + SSYRPI++ S +SK+ E+
Sbjct: 490 WKMMKIIMIPKPGKNHTVASSYRPISLLSCISKLFEK 526
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 43.6 bits (98), Expect = 3e-04
Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 1/99 (1%)
Frame = -3
Query: 317 SLPEICFTQCAVRRELRLLDVHKSSGPDGIPAVVLKTCAPELTPALTRLYRLSYCANRVP 138
SLP T V+ + L + K+ G D + ++ + L ++ P
Sbjct: 234 SLPPSAVTLEEVKNLIAKLPLKKAPGEDLLDNRTIRLLPDQALQFLVLIFNSVLDVGYFP 293
Query: 137 SSWKTAHVHPIPKKGDR-SDPSSYRPIAITSLLSKVMER 24
+WK+A + I K G +D SYRPI++ L K+MER
Sbjct: 294 KAWKSASIIMIHKTGKTPTDVDSYRPISLLPSLGKIMER 332
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown
protein.
Length = 908
Score = 41.9 bits (94), Expect = 0.001
Identities = 28/98 (28%), Positives = 42/98 (42%), Gaps = 1/98 (1%)
Frame = -3
Query: 314 LPEICFTQCAVRRELRLLDVHKSSGPDGIPAVVLKTCAPELTPALTRLYRLSYCANRVPS 135
+P F C V + +K+ G D I LK + +T ++ P
Sbjct: 431 MPITPFEPCEVAEVIVRQSNNKAPGHDVICNATLKALPRQAILYITLVFNAIVRLQYFPY 490
Query: 134 SWKTAHVHPIPKKGD-RSDPSSYRPIAITSLLSKVMER 24
WK + I K G +P+SYRPI++ +SKV ER
Sbjct: 491 QWKLGIISMIHKPGKPEREPASYRPISLLPSISKVFER 528
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 41.1 bits (92), Expect = 0.002
Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = -3
Query: 263 LDVHKSSGPDGIPAVVLKTCAPELTPALTRLYRLSYCANRVPSSWKTAHVHPIPKKGDRS 84
L++ K+ G D + + + L +Y P+ WK A + IPK G
Sbjct: 49 LELKKAPGTDNLNNKTIINLPTKARIYLILIYNNILRTGHFPNKWKHASISMIPKPGKSP 108
Query: 83 DP-SSYRPIAITSLLSKVMER 24
+SYRPI++ S LSK++ER
Sbjct: 109 FALNSYRPISLLSGLSKLLER 129
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 41.1 bits (92), Expect = 0.002
Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = -3
Query: 263 LDVHKSSGPDGIPAVVLKTCAPELTPALTRLYRLSYCANRVPSSWKTAHVHPIPKKGDRS 84
L++ K+ G D + + + L +Y P+ WK A + IPK G
Sbjct: 496 LELKKAPGTDNLNNKTIINLPTKARIYLILIYNNILRTGHFPNKWKHASISMIPKPGKSP 555
Query: 83 DP-SSYRPIAITSLLSKVMER 24
+SYRPI++ S LSK++ER
Sbjct: 556 FALNSYRPISLLSGLSKLLER 576
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 41.1 bits (92), Expect = 0.002
Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = -3
Query: 263 LDVHKSSGPDGIPAVVLKTCAPELTPALTRLYRLSYCANRVPSSWKTAHVHPIPKKGDRS 84
L++ K+ G D + + + L +Y P+ WK A + IPK G
Sbjct: 496 LELKKAPGTDNLNNKTIINLPTKARIYLILIYNNILRTGHFPNKWKHASISMIPKPGKSP 555
Query: 83 DP-SSYRPIAITSLLSKVMER 24
+SYRPI++ S LSK++ER
Sbjct: 556 FALNSYRPISLLSGLSKLLER 576
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 41.1 bits (92), Expect = 0.002
Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = -3
Query: 263 LDVHKSSGPDGIPAVVLKTCAPELTPALTRLYRLSYCANRVPSSWKTAHVHPIPKKGDRS 84
L++ K+ G D + + + L +Y P+ WK A + IPK G
Sbjct: 496 LELKKAPGTDNLNNKTIINLPTKARIYLILIYNNILRTGHFPNKWKHASISMIPKPGKSP 555
Query: 83 DP-SSYRPIAITSLLSKVMER 24
+SYRPI++ S LSK++ER
Sbjct: 556 FALNSYRPISLLSGLSKLLER 576
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 40.7 bits (91), Expect = 0.002
Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 1/99 (1%)
Frame = -3
Query: 317 SLPEICFTQCAVRRELRLLDVHKSSGPDGIPAVVLKTCAPELTPALTRLYRLSYCANRVP 138
SLP T V+ + L + K+ G D + ++ + L ++ P
Sbjct: 432 SLPLSAVTLEEVKNLIAKLPLKKAPGEDLLDNRTIRLLPDQALQFLALIFNSVLDVGYFP 491
Query: 137 SSWKTAHVHPIPKKGDR-SDPSSYRPIAITSLLSKVMER 24
+WK+A + I K G +D SYRP ++ L K+MER
Sbjct: 492 KAWKSASIIMIHKTGKTPTDVDSYRPTSLLPSLGKIMER 530
>X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type I retrotransposable
element R1Dm. ).
Length = 1021
Score = 39.1 bits (87), Expect = 0.007
Identities = 54/216 (25%), Positives = 86/216 (39%), Gaps = 3/216 (1%)
Frame = -3
Query: 665 DNARRRQDPNISEERRKYNAASRSYKKVIAKAKSEHVAR-VGERLKSYPSGSRAFWSLAK 489
D RR D + + AS YKK+I +AK + R VG+ P G R + K
Sbjct: 326 DGRRRDDDAAVELVVVELRRASAYYKKLIGRAKMDDWKRFVGDHADD-PWG-RVY----K 379
Query: 488 AAEGNFCRSSLPPLRKSDDSLAHSAKEKADLLVKLFASNSTVDDGGATPPNIPRCDSSLP 309
G + + LR + + + + A +L++ F + + A +P +L
Sbjct: 380 ICRGRRKCTEIGCLRVNGELITDWG-DCARVLLRNFFPVAESEAPTAIAEEVP---PALE 435
Query: 308 EICFTQCAVRRELRLLDVHKSSGPDGIPAVVLKTCAPELTPALTRLYRLSYCANRVPSSW 129
C R + R +S G DGI + K + L L+ P+ W
Sbjct: 436 VFEVDTCVARLKSR-----RSPGLDGINGTICKAVWRAIPEHLASLFSRCIRLGYFPAEW 490
Query: 128 KTAHVHPIPKKGDRS--DPSSYRPIAITSLLSKVME 27
K V + K D+ +PSSYR I + + KV+E
Sbjct: 491 KCPRVVSLLKGPDKDKCEPSSYRGICLLPVFGKVLE 526
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 36.7 bits (81), Expect = 0.038
Identities = 19/74 (25%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Frame = -3
Query: 242 GPDGIPAVVLKTCAPELTPALTRLYRLSYCANRVPSSWKTAHVHPIPKKG-DRSDPSSYR 66
G + I ++K + +T+L+ + ++ +P ++KT+ + PI K D++ SSYR
Sbjct: 451 GLNRISYQMIKNSSHTTKNRITKLFNEIFNSH-IPQAYKTSLIIPILKPNTDKTKTSSYR 509
Query: 65 PIAITSLLSKVMER 24
PI++ ++K++++
Sbjct: 510 PISLNCCIAKILDK 523
>AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p
protein.
Length = 241
Score = 35.1 bits (77), Expect = 0.12
Identities = 17/40 (42%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Frame = -3
Query: 140 PSSWKTAHVHPIPK-KGDRSDPSSYRPIAITSLLSKVMER 24
P WK + + IPK + D++ PS YRPI++ + LSK+ E+
Sbjct: 27 PQKWKKSIIIMIPKPEKDKTQPS-YRPISLLTCLSKLFEK 65
>X51967-1|CAA36225.1| 1057|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type II retrotransposable
element R2Dm. ).
Length = 1057
Score = 32.7 bits (71), Expect = 0.62
Identities = 21/74 (28%), Positives = 33/74 (44%)
Frame = -3
Query: 263 LDVHKSSGPDGIPAVVLKTCAPELTPALTRLYRLSYCANRVPSSWKTAHVHPIPKKGDRS 84
+ + S GPDGI K+ + + R+ L +P S + A IPK
Sbjct: 354 VSLSSSPGPDGITP---KSAREVPSGIMLRIMNLILWCGNLPHSIRLARTVFIPKTVTAK 410
Query: 83 DPSSYRPIAITSLL 42
P +RPI++ S+L
Sbjct: 411 RPQDFRPISVPSVL 424
>AY060997-1|AAL28545.1| 619|Drosophila melanogaster HL01392p
protein.
Length = 619
Score = 30.3 bits (65), Expect = 3.3
Identities = 26/110 (23%), Positives = 48/110 (43%), Gaps = 4/110 (3%)
Frame = -3
Query: 719 NNASRDXAHLXRSAYGAWDNARRRQDPNISEERRKYNAASRSYKKVIAKAKSEHVARVG- 543
N + D L + D A+RR++ + EER + A + AK +E A++
Sbjct: 321 NEEALDEVDLEKKRAQKADEAKRREERALKEERDRLTAEAEKQAAAKAKKAAEEAAKIAA 380
Query: 542 -ERLKSYPSGSRAF--WSLAKAAEGNFCRSSLPPLRKSDDSLAHSAKEKA 402
E L + + +A KAAE + + + R ++++ A E+A
Sbjct: 381 EEALLAEAAAQKAAEEAKALKAAE-DAAQKAAEEARLAEEAAAQKVAEEA 429
>AE014297-1191|AAF54549.3| 619|Drosophila melanogaster CG6544-PA,
isoform A protein.
Length = 619
Score = 30.3 bits (65), Expect = 3.3
Identities = 26/110 (23%), Positives = 48/110 (43%), Gaps = 4/110 (3%)
Frame = -3
Query: 719 NNASRDXAHLXRSAYGAWDNARRRQDPNISEERRKYNAASRSYKKVIAKAKSEHVARVG- 543
N + D L + D A+RR++ + EER + A + AK +E A++
Sbjct: 321 NEEALDEVDLEKKRAQKADEAKRREERALKEERDRLTAEAEKQAAAKAKKAAEEAAKIAA 380
Query: 542 -ERLKSYPSGSRAF--WSLAKAAEGNFCRSSLPPLRKSDDSLAHSAKEKA 402
E L + + +A KAAE + + + R ++++ A E+A
Sbjct: 381 EEALLAEAAAQKAAEEAKALKAAE-DAAQKAAEEARLAEEAAAQKVAEEA 429
>L77907-1|AAC37264.1| 1883|Drosophila melanogaster
chromodomain-helicase-DNA-bindingprotein protein.
Length = 1883
Score = 29.9 bits (64), Expect = 4.4
Identities = 22/116 (18%), Positives = 51/116 (43%), Gaps = 1/116 (0%)
Frame = -3
Query: 674 GAWDNARRRQDPNISEERRKYNAASRSYKKVIAKAKSEHVARVGERLKSYPSGSRAFWSL 495
G+W+ + + DP + + +R + + ++E++ ++ ++ G +
Sbjct: 1342 GSWE--QMKLDPTLKLTDKILLNDTRKPQAKQLQTRAEYLLKIIKKNVELTKGGQRRQRR 1399
Query: 494 AKAAEGNFCRSSLPPLRKSDDSLAHSAKEKA-DLLVKLFASNSTVDDGGATPPNIP 330
+A+ N +++ + D+ H ++ A D +SNS VD A+P N P
Sbjct: 1400 PRASRANDAKAASQSASSTIDAKPHDGEDAAGDARTVAESSNSQVDPSNASPHNAP 1455
>BT011071-1|AAR82736.1| 1645|Drosophila melanogaster SD21488p protein.
Length = 1645
Score = 29.9 bits (64), Expect = 4.4
Identities = 22/116 (18%), Positives = 51/116 (43%), Gaps = 1/116 (0%)
Frame = -3
Query: 674 GAWDNARRRQDPNISEERRKYNAASRSYKKVIAKAKSEHVARVGERLKSYPSGSRAFWSL 495
G+W+ + + DP + + +R + + ++E++ ++ ++ G +
Sbjct: 1342 GSWE--QMKLDPTLKLTDKILLNDTRKPQAKQLQTRAEYLLKIIKKNVELTKGGQRRQRR 1399
Query: 494 AKAAEGNFCRSSLPPLRKSDDSLAHSAKEKA-DLLVKLFASNSTVDDGGATPPNIP 330
+A+ N +++ + D+ H ++ A D +SNS VD A+P N P
Sbjct: 1400 PRASRANDAKAASQSASSTIDAKPHDGEDAAGDARTVAESSNSQVDPSNASPHNAP 1455
>AY095039-1|AAM11367.1| 1710|Drosophila melanogaster LD28380p protein.
Length = 1710
Score = 29.5 bits (63), Expect = 5.8
Identities = 31/143 (21%), Positives = 54/143 (37%), Gaps = 1/143 (0%)
Frame = -3
Query: 536 LKSYPSGSRAFWSLAKAAEGNFCRSSLP-PLRKSDDSLAHSAKEKADLLVKLFASNSTVD 360
LKSY +K G +++ P+ K+ + S K+ AD K ++
Sbjct: 1094 LKSYALSDEMAQGRSKRMAGGAAQTTKKAPMPKAART---SLKKPAD---KSLPEQHRLE 1147
Query: 359 DGGATPPNIPRCDSSLPEICFTQCAVRRELRLLDVHKSSGPDGIPAVVLKTCAPELTPAL 180
PPN PR + E + + RL K + +P+ + + P
Sbjct: 1148 QQQLAPPNSPRKMKGVKETETDTTSAMKSSRLTKRTKRARAKSLPSNIERVTEPVAAVPN 1207
Query: 179 TRLYRLSYCANRVPSSWKTAHVH 111
+ RL+ A VP+++ H H
Sbjct: 1208 ANVLRLADLAPEVPNTFAPTHSH 1230
>AE014134-2294|AAF53256.2| 1710|Drosophila melanogaster CG16972-PA
protein.
Length = 1710
Score = 29.5 bits (63), Expect = 5.8
Identities = 31/143 (21%), Positives = 54/143 (37%), Gaps = 1/143 (0%)
Frame = -3
Query: 536 LKSYPSGSRAFWSLAKAAEGNFCRSSLP-PLRKSDDSLAHSAKEKADLLVKLFASNSTVD 360
LKSY +K G +++ P+ K+ + S K+ AD K ++
Sbjct: 1094 LKSYALSDEMAQGRSKRMAGGAAQTTKKAPMPKAART---SLKKPAD---KSLPEQHRLE 1147
Query: 359 DGGATPPNIPRCDSSLPEICFTQCAVRRELRLLDVHKSSGPDGIPAVVLKTCAPELTPAL 180
PPN PR + E + + RL K + +P+ + + P
Sbjct: 1148 QQQLAPPNSPRKMKGVKETETDTTSAMKSSRLTKRTKRARAKSLPSNIERVTEPVAAVPN 1207
Query: 179 TRLYRLSYCANRVPSSWKTAHVH 111
+ RL+ A VP+++ H H
Sbjct: 1208 ANVLRLADLAPEVPNTFAPTHSH 1230
>AY095050-1|AAM11378.1| 1101|Drosophila melanogaster LD39323p protein.
Length = 1101
Score = 29.1 bits (62), Expect = 7.7
Identities = 22/116 (18%), Positives = 51/116 (43%), Gaps = 1/116 (0%)
Frame = -3
Query: 674 GAWDNARRRQDPNISEERRKYNAASRSYKKVIAKAKSEHVARVGERLKSYPSGSRAFWSL 495
G+W+ + + DP + + +R + + ++E++ ++ ++ G +
Sbjct: 810 GSWE--QMKLDPTLKLTDKILLNDTRKPQAKQLQTRAEYLLKIIKKNVELTKGGQRRQRR 867
Query: 494 AKAAEGNFCRSSLPPLRKSDDSLAHSAKEKA-DLLVKLFASNSTVDDGGATPPNIP 330
+A+ N +++ + D+ H ++ A D +SNS VD A+P N P
Sbjct: 868 PRASRANDAKAASQSASSTIDAKPHDGEDAAGDARTVAESSNSQVDPSTASPHNAP 923
>AE014297-4548|AAF57014.2| 539|Drosophila melanogaster CG11498-PA
protein.
Length = 539
Score = 29.1 bits (62), Expect = 7.7
Identities = 18/65 (27%), Positives = 25/65 (38%)
Frame = +2
Query: 158 KRGDTDALAQASAQGRTFSEPLRGCRLAHSTYGRPGVGVPA*LHTV*SRSPAGNYHTGGC 337
+R D AL + RGC + G G G P H++ +P G T C
Sbjct: 264 RRLDAQALVEKRPAAGLLMNFSRGCEVVLHMMGPEG-GPPGSSHSIGKTTPPGGASTSSC 322
Query: 338 SVVWH 352
S +H
Sbjct: 323 SDGYH 327
>AE014134-528|AAF51170.1| 1883|Drosophila melanogaster CG3733-PA
protein.
Length = 1883
Score = 29.1 bits (62), Expect = 7.7
Identities = 22/116 (18%), Positives = 51/116 (43%), Gaps = 1/116 (0%)
Frame = -3
Query: 674 GAWDNARRRQDPNISEERRKYNAASRSYKKVIAKAKSEHVARVGERLKSYPSGSRAFWSL 495
G+W+ + + DP + + +R + + ++E++ ++ ++ G +
Sbjct: 1342 GSWE--QMKLDPTLKLTDKILLNDTRKPQAKQLQTRAEYLLKIIKKNVELTKGGQRRQRR 1399
Query: 494 AKAAEGNFCRSSLPPLRKSDDSLAHSAKEKA-DLLVKLFASNSTVDDGGATPPNIP 330
+A+ N +++ + D+ H ++ A D +SNS VD A+P N P
Sbjct: 1400 PRASRANDAKAASQSASSTIDAKPHDGEDAAGDARTVAESSNSQVDPSTASPHNAP 1455
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,198,224
Number of Sequences: 53049
Number of extensions: 856977
Number of successful extensions: 2256
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 2123
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2242
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3880595628
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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