Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP11_T7_K05
(823 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58735-1|AAC48148.1| 891|Caenorhabditis elegans Hypothetical pr... 58 1e-08
AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse trans... 56 2e-08
AF025462-7|AAB71003.1| 805|Caenorhabditis elegans Hypothetical ... 56 2e-08
AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical ... 53 2e-07
AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical ... 46 4e-05
AF016663-5|AAC70880.1| 864|Caenorhabditis elegans Hypothetical ... 45 8e-05
AL110477-8|CAB76739.1| 1042|Caenorhabditis elegans Hypothetical ... 36 0.046
U64857-15|AAC25858.1| 470|Caenorhabditis elegans Hypothetical p... 30 2.3
Z81097-14|CAB03171.2| 221|Caenorhabditis elegans Hypothetical p... 29 4.0
Z80221-1|CAB02309.1| 690|Caenorhabditis elegans Hypothetical pr... 29 4.0
AF003141-11|AAP68909.1| 1437|Caenorhabditis elegans Hypothetical... 28 7.0
AL032658-3|CAA21745.1| 152|Caenorhabditis elegans Hypothetical ... 28 9.3
>U58735-1|AAC48148.1| 891|Caenorhabditis elegans Hypothetical
protein F20B4.7 protein.
Length = 891
Score = 57.6 bits (133), Expect = 1e-08
Identities = 49/185 (26%), Positives = 86/185 (46%), Gaps = 3/185 (1%)
Frame = -3
Query: 569 KSEHVARVGERLKSYPSGSRAFWSLAKAAEGNFCRSSLPPLRKSDDSLAHSAKEKADLLV 390
+ +H A RL S + ++ +A+ + N +S +P L+ + +++ K + +
Sbjct: 290 QKDHEAFASTRLLSAANQKKSLKRVAR--DINEYKSVIPCLKSTSTGERITSRVKMEQEI 347
Query: 389 KLFASN---STVDDGGATPPNIPRCDSSLPEICFTQCAVRRELRLLDVHKSSGPDGIPAV 219
+ F + S V + A+ +IP + P F +R LR K++G D I A
Sbjct: 348 EKFYTEFFKSAVSNSQAS--SIPTTATPPP---FLPEKIRYALRSFPNGKAAGQDKISAD 402
Query: 218 VLKTCAPELTPALTRLYRLSYCANRVPSSWKTAHVHPIPKKGDRSDPSSYRPIAITSLLS 39
LK+C + +T + + VP WKT+ I KKGDR + +YRPI + +L
Sbjct: 403 FLKSCHDNVIDLITDRFNRYLHSRNVPKPWKTSKTTLIFKKGDRENLENYRPICLLPVLY 462
Query: 38 KVMER 24
KV +
Sbjct: 463 KVFTK 467
>AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse
transcriptase protein.
Length = 1066
Score = 56.4 bits (130), Expect = 2e-08
Identities = 48/185 (25%), Positives = 85/185 (45%), Gaps = 3/185 (1%)
Frame = -3
Query: 569 KSEHVARVGERLKSYPSGSRAFWSLAKAAEGNFCRSSLPPLRKSDDSLAHSAKEKADLLV 390
+ +H A RL S + ++ +A+ + N +S +P L+ + +++ K + +
Sbjct: 461 QKDHEAFASTRLLSAANQKKSLKRVAR--DINEYKSVIPCLKSTSTGERITSRVKMEQEI 518
Query: 389 KLFASN---STVDDGGATPPNIPRCDSSLPEICFTQCAVRRELRLLDVHKSSGPDGIPAV 219
+ F + S V + + +IP + P F +R LR K++G D I A
Sbjct: 519 EKFYTELFKSAVSNSQTS--SIPATATPPP---FLPEEIRHVLRSFPNGKAAGQDKISAD 573
Query: 218 VLKTCAPELTPALTRLYRLSYCANRVPSSWKTAHVHPIPKKGDRSDPSSYRPIAITSLLS 39
LK+C + +T + + VP WKT+ I KKGDR + +YRPI + +L
Sbjct: 574 FLKSCHDNVIDLITDRFNRYLHSRNVPKPWKTSKTTLIFKKGDRENLENYRPICLLPVLY 633
Query: 38 KVMER 24
KV +
Sbjct: 634 KVFTK 638
>AF025462-7|AAB71003.1| 805|Caenorhabditis elegans Hypothetical
protein K10F12.5 protein.
Length = 805
Score = 56.4 bits (130), Expect = 2e-08
Identities = 48/185 (25%), Positives = 85/185 (45%), Gaps = 3/185 (1%)
Frame = -3
Query: 569 KSEHVARVGERLKSYPSGSRAFWSLAKAAEGNFCRSSLPPLRKSDDSLAHSAKEKADLLV 390
+ +H A RL S + ++ +A+ + N +S +P L+ + +++ K + +
Sbjct: 200 QKDHEAFASTRLLSAANQKKSLKRVAR--DINEYKSVIPCLKSTSTGERITSRVKMEQEI 257
Query: 389 KLFASN---STVDDGGATPPNIPRCDSSLPEICFTQCAVRRELRLLDVHKSSGPDGIPAV 219
+ F + S V + + +IP + P F +R LR K++G D I A
Sbjct: 258 EKFYTELFKSAVSNSQTS--SIPATATPPP---FLPEEIRHVLRSFPNGKAAGQDKISAD 312
Query: 218 VLKTCAPELTPALTRLYRLSYCANRVPSSWKTAHVHPIPKKGDRSDPSSYRPIAITSLLS 39
LK+C + +T + + VP WKT+ I KKGDR + +YRPI + +L
Sbjct: 313 FLKSCHDNVIDLITDRFNRYLHSRNVPKPWKTSKTTLIFKKGDRENLENYRPICLLPVLY 372
Query: 38 KVMER 24
KV +
Sbjct: 373 KVFTK 377
>AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical
protein R11E3.3 protein.
Length = 931
Score = 53.2 bits (122), Expect = 2e-07
Identities = 29/74 (39%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Frame = -3
Query: 242 GPDGIPAVVLKTCAPELTPALTRLYRLSYCANRVPSSWKTAHVHPIPK-KGDRSDPSSYR 66
GPDGI + ++ L LY +S N +P WK A+V IPK K D + SSYR
Sbjct: 347 GPDGIAQIHIRKLPMCGYSFLAYLYNVSLSTNIIPDKWKKANVIMIPKPKKDPAIASSYR 406
Query: 65 PIAITSLLSKVMER 24
PI++ S ++K++E+
Sbjct: 407 PISLLSPIAKLLEK 420
>AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical
protein F21E9.1 protein.
Length = 1170
Score = 45.6 bits (103), Expect = 4e-05
Identities = 37/134 (27%), Positives = 62/134 (46%), Gaps = 12/134 (8%)
Frame = -3
Query: 458 LPPLRKSDDSLAHSAKEKADLLVKLFASNSTVDDGGATPPNI----PRCDSSLPEICFTQ 291
+P + + S+ + + EK+++ K+FAS+ + DD + ++ P SSL T
Sbjct: 707 VPSIILDNKSIVNDS-EKSEIFAKIFASHYS-DDSSQSQNSLHSPSPTSHSSLQNQTSTS 764
Query: 290 C--------AVRRELRLLDVHKSSGPDGIPAVVLKTCAPELTPALTRLYRLSYCANRVPS 135
+ L L P +VLK CA L L+ +Y+ S+ +++P
Sbjct: 765 LHLDSFQPYMIESVLSKLPPKCGFSPHCANYLVLKKCATPLAFPLSIIYKQSFADSKIPD 824
Query: 134 SWKTAHVHPIPKKG 93
WK A + PIPKKG
Sbjct: 825 CWKKAIIIPIPKKG 838
>AF016663-5|AAC70880.1| 864|Caenorhabditis elegans Hypothetical
protein F21E9.5 protein.
Length = 864
Score = 44.8 bits (101), Expect = 8e-05
Identities = 34/137 (24%), Positives = 60/137 (43%), Gaps = 4/137 (2%)
Frame = -3
Query: 488 AAEGNFCRSSLPPLRKSDDSLAHSAKEKADLLVKLFASNSTVDDGGATPPNIPR----CD 321
A + N +S +P L+ S +++EK + +++F ++ PP +P
Sbjct: 331 ARDLNEYKSFIPSLKCSSTGERITSREKMEREIEMFYTSLFRSRKTPPPPQLPTPPPIMA 390
Query: 320 SSLPEICFTQCAVRRELRLLDVHKSSGPDGIPAVVLKTCAPELTPALTRLYRLSYCANRV 141
LP F + +R + K++G D I A LK+C + +T + + +
Sbjct: 391 EPLPPFLFGE--IRAAINSFPNGKAAGSDKITADFLKSCGDYVIRLITGRFNRYLESGNI 448
Query: 140 PSSWKTAHVHPIPKKGD 90
P WKT+ I KKGD
Sbjct: 449 PKDWKTSKTTLIFKKGD 465
>AL110477-8|CAB76739.1| 1042|Caenorhabditis elegans Hypothetical
protein Y113G7B.12 protein.
Length = 1042
Score = 35.5 bits (78), Expect = 0.046
Identities = 34/125 (27%), Positives = 46/125 (36%), Gaps = 2/125 (1%)
Frame = -3
Query: 437 DDSLAHSAKEKADLLVKLFASNSTVDDGGATPPNIPRCDSSLPEICFTQCAVRRELRLLD 258
DD L KA +F+S + P N + +I F Q V++ L
Sbjct: 715 DDKLISRNSGKASCFASIFSSKFKDQNSTQIPENTDNKTINASQI-FEQSMVKQALE--H 771
Query: 257 VHKSSGPDGIPAVVLKTCAPELTPALTRLYRLSYCANRVPSSWKTAHVHPIPKKGDR--S 84
V D +VL CA L L+R+ R + P SW V P P K
Sbjct: 772 VTPRFHFDKTNILVLNNCANSLAAPLSRILRNIFETEDYPESWNHCIVIPDPPKIRELIR 831
Query: 83 DPSSY 69
DP +Y
Sbjct: 832 DPKNY 836
>U64857-15|AAC25858.1| 470|Caenorhabditis elegans Hypothetical
protein C37C3.1 protein.
Length = 470
Score = 29.9 bits (64), Expect = 2.3
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = -3
Query: 656 RRRQDPNISEERRKY-NAASRSYKKVIAKAKSEHVARVGERLKSYPSGSRAFWSLAKAAE 480
R+ + S +R+Y + SRS K A+ +S H++R G R + SR S ++
Sbjct: 285 RKSTSHSTSLSKRRYLRSRSRSLSKSPARRRSRHLSRSGSRTPA-QRHSRRSESTSRRRS 343
Query: 479 GNFCRS-SLPPLRK 441
G RS S P RK
Sbjct: 344 GRHSRSRSRSPPRK 357
>Z81097-14|CAB03171.2| 221|Caenorhabditis elegans Hypothetical
protein K07A1.10 protein.
Length = 221
Score = 29.1 bits (62), Expect = 4.0
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Frame = -3
Query: 620 RKYNAASRSYKKVIAKAKSEHVARVGE---RLKSYPS 519
R++N A + YK++ K + +AR+ E LK YP+
Sbjct: 106 REFNNAKKEYKELQKKKRESELARIAELEKNLKKYPA 142
>Z80221-1|CAB02309.1| 690|Caenorhabditis elegans Hypothetical
protein ZC247.2 protein.
Length = 690
Score = 29.1 bits (62), Expect = 4.0
Identities = 25/113 (22%), Positives = 48/113 (42%)
Frame = -3
Query: 650 RQDPNISEERRKYNAASRSYKKVIAKAKSEHVARVGERLKSYPSGSRAFWSLAKAAEGNF 471
R++ S + +AS KK+ K + GE+ +G+ + L ++
Sbjct: 287 REEAGPSNDSSDGGSASELRKKLTEKIMEQKFMVNGEQRAL--NGNASSRGLGRSIS--- 341
Query: 470 CRSSLPPLRKSDDSLAHSAKEKADLLVKLFASNSTVDDGGATPPNIPRCDSSL 312
RSS+ P R+ D L +K++ + + + ++ ATPP P +L
Sbjct: 342 -RSSMTPDRRLDPILEDGSKQRQAIASAISVNRPSITRNSATPPMTPHSKLAL 393
>AF003141-11|AAP68909.1| 1437|Caenorhabditis elegans Hypothetical
protein W02D3.10a protein.
Length = 1437
Score = 28.3 bits (60), Expect = 7.0
Identities = 16/61 (26%), Positives = 30/61 (49%)
Frame = -3
Query: 665 DNARRRQDPNISEERRKYNAASRSYKKVIAKAKSEHVARVGERLKSYPSGSRAFWSLAKA 486
+ R+RQ+PNI R+ + + R ++++I ++E + + Y RA A A
Sbjct: 1010 ETKRKRQEPNIVALRQAHFLSCRLFRQII-DVENEEIEEEKKPKAQYEMQGRAILKAASA 1068
Query: 485 A 483
A
Sbjct: 1069 A 1069
>AL032658-3|CAA21745.1| 152|Caenorhabditis elegans Hypothetical
protein Y76A2B.4 protein.
Length = 152
Score = 27.9 bits (59), Expect = 9.3
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +1
Query: 544 PTLATCSDFALAITFL*DLEAALYFRLS 627
PTLA C A+A ++ L ++Y RLS
Sbjct: 91 PTLAVCITSAIATAYILQLTQSIYLRLS 118
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,167,902
Number of Sequences: 27780
Number of extensions: 404818
Number of successful extensions: 1006
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 946
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1003
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2029935014
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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