Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP11_T7_J24
(808 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0491 + 4290881-4291228,4291298-4291393 33 0.20
05_06_0121 - 25762247-25762876,25762961-25763134,25763899-25764186 33 0.20
04_03_0468 + 16249716-16249822,16250080-16250233,16250788-16251138 32 0.47
03_05_0424 + 24107009-24107138,24107381-24107784 32 0.62
02_02_0366 + 9494205-9494810 32 0.62
04_04_0433 + 25163111-25163471,25163943-25164154,25164420-251647... 31 0.82
02_04_0520 - 23628183-23628195,23629354-23630036 31 1.1
06_03_0806 + 24788441-24789049 31 1.4
08_01_0501 + 4345522-4345720,4346598-4347167,4347294-4347366,435... 30 1.9
03_01_0615 + 4523202-4524518 30 1.9
07_01_0404 + 3093851-3094051,3094622-3094948,3096685-3096798,309... 30 2.5
07_01_0400 + 3048607-3048807,3049378-3049704,3051441-3051554,305... 30 2.5
07_01_0396 + 3016900-3017175,3017926-3018039,3018138-3018350,301... 30 2.5
11_03_0208 - 11682869-11683459 29 3.3
07_03_1155 - 24413270-24413728 29 3.3
04_04_1074 + 30628192-30628456,30628924-30629144 29 3.3
01_05_0606 - 23607170-23607568,23607738-23607941,23608035-236081... 29 3.3
07_03_1402 + 26302443-26302575,26302851-26302980,26303128-26303893 29 4.4
05_03_0392 - 13432385-13432622,13432734-13433104 29 4.4
05_01_0028 + 182528-183852,183967-184127,184872-185116,185330-18... 29 4.4
03_06_0519 - 34481751-34482722 29 5.8
02_02_0347 + 9222556-9222927 29 5.8
12_01_0346 + 2652181-2653566 28 7.6
10_06_0039 - 9966744-9967535,9968241-9968482,9969021-9969223,996... 28 7.6
09_04_0109 - 14674980-14675004,14675861-14676468 28 7.6
05_01_0395 + 3118480-3119097,3119699-3119989,3120063-3120114,312... 28 7.6
05_01_0201 - 1441063-1443836,1444658-1445758,1446367-1447179,144... 28 7.6
04_04_1019 + 30166514-30166585,30167207-30167841,30168505-301686... 28 7.6
03_01_0235 - 1842909-1843498,1844380-1844569 28 7.6
>08_01_0491 + 4290881-4291228,4291298-4291393
Length = 147
Score = 33.5 bits (73), Expect = 0.20
Identities = 17/37 (45%), Positives = 19/37 (51%)
Frame = -3
Query: 545 SRWPSSLATDCTASCRWTWCGAGTWSPASEPRPLRPR 435
SR P S+ A C CG G P S+P PLRPR
Sbjct: 44 SRQPQSILIRAFAGCLLALCGGGGGDP-SDPPPLRPR 79
>05_06_0121 - 25762247-25762876,25762961-25763134,25763899-25764186
Length = 363
Score = 33.5 bits (73), Expect = 0.20
Identities = 28/84 (33%), Positives = 35/84 (41%)
Frame = -1
Query: 367 RAPPGTVHLSVRRAVPVGAGHLFPGYNGSMREVPARSETDLAVEGRTAVSGGHCGSGGRH 188
RA P T H + R A + AG+ P R V R D A ++V+ C S R
Sbjct: 253 RAQPKTTHNTPRLAAALPAGYHGPASPAKGRVVSPRYMADTA----SSVARARCQSAPRQ 308
Query: 187 VHGSAGHLPLVPVDEPAPRLTTCG 116
HG+AG EP P L G
Sbjct: 309 RHGAAG--------EPRPSLARAG 324
>04_03_0468 + 16249716-16249822,16250080-16250233,16250788-16251138
Length = 203
Score = 32.3 bits (70), Expect = 0.47
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = -3
Query: 590 SIFLPGRWRLASS*CSRWPSSLATDCTASCRWT-WCGAGTWSPASE 456
++ LPG W +SS + S+ +T T + RW WCG G PA E
Sbjct: 118 AVILPGSWHPSSS-SGKGRSAAST--TGTRRWLGWCGGGDEEPAME 160
>03_05_0424 + 24107009-24107138,24107381-24107784
Length = 177
Score = 31.9 bits (69), Expect = 0.62
Identities = 13/34 (38%), Positives = 15/34 (44%)
Frame = +3
Query: 168 WPAEPCTCRPPDPQCPPETAVRPSTARSVSDRAG 269
WP P CR P PPET ++R S G
Sbjct: 118 WPTSPTQCRHRRPSRPPETTTATPSSRPASSPLG 151
>02_02_0366 + 9494205-9494810
Length = 201
Score = 31.9 bits (69), Expect = 0.62
Identities = 24/63 (38%), Positives = 28/63 (44%), Gaps = 6/63 (9%)
Frame = -1
Query: 382 RAGRERAPPGT------VHLSVRRAVPVGAGHLFPGYNGSMREVPARSETDLAVEGRTAV 221
R G PPGT V L+V +V VGA PG+ G + T V GR AV
Sbjct: 105 RVGGASGPPGTARARRTVRLNVTVSVAVGALLGDPGFLGDVAAGAVAVTTATTVRGRVAV 164
Query: 220 SGG 212
GG
Sbjct: 165 LGG 167
>04_04_0433 +
25163111-25163471,25163943-25164154,25164420-25164701,
25164794-25164916,25165511-25165664,25165754-25165965,
25166143-25166212,25166294-25166424
Length = 514
Score = 31.5 bits (68), Expect = 0.82
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = +3
Query: 195 PPDPQCPPETAVRPSTARSVSDRAGTSRMLPL*PGNRCPAP 317
PP P P TA S+ R S G R++ L CP+P
Sbjct: 15 PPPPASLPSTACTSSSRRRASPWGGAGRLIRLRLRGHCPSP 55
>02_04_0520 - 23628183-23628195,23629354-23630036
Length = 231
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +3
Query: 186 TCRPPDPQCPPETAVRPSTARSVSDRAGTSR 278
T PP P PP+TA P TARS R +++
Sbjct: 191 TLPPPPPPPPPDTAPPPQTARSRGGRRDSTK 221
>06_03_0806 + 24788441-24789049
Length = 202
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = +1
Query: 106 AVAGRTLLGVERARRLERAEDGLQSRVRAGHQTHNAHQKQQYVP 237
++ GR L GV+ A RA D L +R R HQ +K + +P
Sbjct: 95 SMLGRPLSGVDMAALAVRASDALVARARPRHQRGGGVKKVRIMP 138
>08_01_0501 +
4345522-4345720,4346598-4347167,4347294-4347366,
4351133-4353092,4353465-4353840,4353932-4354326,
4354597-4354765,4355444-4355518,4357699-4357826,
4357988-4358213,4358290-4358417,4358505-4358768
Length = 1520
Score = 30.3 bits (65), Expect = 1.9
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = -3
Query: 593 LSIFLPGRWRLASS*CSRWPSSLATDCTASCRWTWCGAGTWSPASEPRPLRPR-ASCSL 420
L +FLP R L+S C P LA+ C A + T G G ++ PR +R R A+C +
Sbjct: 4 LFLFLPRRSPLSSLDCGVVPRQLASACAAEVQRT--GGGD-EASTAPRQIRRRSAACGV 59
>03_01_0615 + 4523202-4524518
Length = 438
Score = 30.3 bits (65), Expect = 1.9
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = +3
Query: 198 PDPQCPPETAVRPSTARSVSDRAGTSRMLPL*PGNRCPAPTG 323
P CP + P+ + S + +S PL G CPAP G
Sbjct: 109 PCGTCPSSSLFAPANSSSYASLPCSSSWCPLFQGQACPAPQG 150
>07_01_0404 + 3093851-3094051,3094622-3094948,3096685-3096798,
3096897-3097109,3097975-3098151,3098270-3100091,
3100107-3100927,3101070-3101390
Length = 1331
Score = 29.9 bits (64), Expect = 2.5
Identities = 16/68 (23%), Positives = 33/68 (48%)
Frame = +2
Query: 179 AVYVPATRPTMPTRNSSTSLNSQIGFRSCGNLTHASIIAGKQMPSADRHSAPNREMNSPR 358
+ ++ ++R M T+N ++L+ G + N+ ++ G Q+PS S+ N ++
Sbjct: 800 SAFLGSSRDLMSTKNEMSNLDLTYGLQMGNNIGSSAWSQGMQLPSTQLQSSSNSLLDQGA 859
Query: 359 RGTLTAST 382
R ST
Sbjct: 860 RLNSNFST 867
>07_01_0400 + 3048607-3048807,3049378-3049704,3051441-3051554,
3051653-3051865,3052731-3052907,3053026-3054847,
3054863-3055683,3055826-3056146
Length = 1331
Score = 29.9 bits (64), Expect = 2.5
Identities = 16/68 (23%), Positives = 33/68 (48%)
Frame = +2
Query: 179 AVYVPATRPTMPTRNSSTSLNSQIGFRSCGNLTHASIIAGKQMPSADRHSAPNREMNSPR 358
+ ++ ++R M T+N ++L+ G + N+ ++ G Q+PS S+ N ++
Sbjct: 800 SAFLGSSRDLMSTKNEMSNLDLTYGLQMGNNIGSSAWSQGMQLPSTQLQSSSNSLLDQGA 859
Query: 359 RGTLTAST 382
R ST
Sbjct: 860 RLNSNFST 867
>07_01_0396 +
3016900-3017175,3017926-3018039,3018138-3018350,
3019216-3019392,3019511-3021332,3021348-3022168,
3022311-3022631
Length = 1247
Score = 29.9 bits (64), Expect = 2.5
Identities = 16/68 (23%), Positives = 33/68 (48%)
Frame = +2
Query: 179 AVYVPATRPTMPTRNSSTSLNSQIGFRSCGNLTHASIIAGKQMPSADRHSAPNREMNSPR 358
+ ++ ++R M T+N ++L+ G + N+ ++ G Q+PS S+ N ++
Sbjct: 716 SAFLGSSRDLMSTKNEMSNLDLTYGLQMGNNIGSSAWSQGMQLPSTQLQSSSNSLLDQGA 775
Query: 359 RGTLTAST 382
R ST
Sbjct: 776 RLNSNFST 783
>11_03_0208 - 11682869-11683459
Length = 196
Score = 29.5 bits (63), Expect = 3.3
Identities = 15/30 (50%), Positives = 16/30 (53%), Gaps = 6/30 (20%)
Frame = +3
Query: 171 PAEPCTCR------PPDPQCPPETAVRPST 242
P E C CR PP PQ PP TAV +T
Sbjct: 39 PREGCQCRRVLHQVPPRPQAPPPTAVDDAT 68
>07_03_1155 - 24413270-24413728
Length = 152
Score = 29.5 bits (63), Expect = 3.3
Identities = 16/44 (36%), Positives = 20/44 (45%)
Frame = -1
Query: 259 SETDLAVEGRTAVSGGHCGSGGRHVHGSAGHLPLVPVDEPAPRL 128
S + L + +S G GS RH+ A H P VP P P L
Sbjct: 7 SSSALLLMAALLLSCGAMGSTARHLEEKAPHFPAVPELPPHPEL 50
>04_04_1074 + 30628192-30628456,30628924-30629144
Length = 161
Score = 29.5 bits (63), Expect = 3.3
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = -1
Query: 322 PVGAGHLFPGYNGSMREVPARSETDLAVEGR-TAVSGGHCGSGGRHVHGSAGHLPLVPVD 146
PV + PG+NGS + V R+ + + G A+ G +GG H G G + V
Sbjct: 92 PVPSLFFLPGFNGSGKSVLGRAFSRVTPAGEIEALRKGSSMAGGEHRGGRGGRVN-VKKT 150
Query: 145 EPAP 134
P P
Sbjct: 151 SPTP 154
>01_05_0606 -
23607170-23607568,23607738-23607941,23608035-23608113,
23608371-23608430,23608514-23608611,23608703-23608891,
23610670-23611368
Length = 575
Score = 29.5 bits (63), Expect = 3.3
Identities = 25/77 (32%), Positives = 35/77 (45%)
Frame = -1
Query: 346 HLSVRRAVPVGAGHLFPGYNGSMREVPARSETDLAVEGRTAVSGGHCGSGGRHVHGSAGH 167
HL V V G LF S+ + PAR E D+ + R A + HV GSA +
Sbjct: 229 HLLYEVPVRVAGGLLFELLGQSVGD-PARDEEDIPIVLR-AWQAQNFLITALHVKGSAPN 286
Query: 166 LPLVPVDEPAPRLTTCG 116
+ ++ V E L+ CG
Sbjct: 287 VNVIGVTEVQELLSACG 303
>07_03_1402 + 26302443-26302575,26302851-26302980,26303128-26303893
Length = 342
Score = 29.1 bits (62), Expect = 4.4
Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 2/82 (2%)
Frame = -1
Query: 361 PPGTVHLSVRRAVPVGAGHLFPGYNGSMREVPARSET--DLAVEGRTAVSGGHCGSGGRH 188
PP + R + GA + G +GS+ + S+ + AV+G +A + HCG GG
Sbjct: 159 PPPESYDGSRYSTECGAASV--GGDGSLSSLSGYSQATAEFAVDGASASALLHCGGGG-- 214
Query: 187 VHGSAGHLPLVPVDEPAPRLTT 122
S G P P P +++
Sbjct: 215 PTSSGGGAPPAPTAAVIPSVSS 236
>05_03_0392 - 13432385-13432622,13432734-13433104
Length = 202
Score = 29.1 bits (62), Expect = 4.4
Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = -1
Query: 298 PGYNGSMREVPARSET-DLAVEGRTAVSGGHCGSGGRHVHGSAGHL 164
P N S P RS+ D+ V+ V GG G +V G AGHL
Sbjct: 3 PPRNPSRHRRPRRSDLRDVVVDRGEVVGGGGKVEGREYVGGLAGHL 48
>05_01_0028 +
182528-183852,183967-184127,184872-185116,185330-186073
Length = 824
Score = 29.1 bits (62), Expect = 4.4
Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Frame = +1
Query: 487 HHVHRHEAVQSVANEDGHREHH--DDASRQRPGRKIE 591
HH H H +S ++ G HH DD GR+++
Sbjct: 229 HHSHSHPNARSPSSRSGATNHHHDDDGDGDEEGRRLK 265
>03_06_0519 - 34481751-34482722
Length = 323
Score = 28.7 bits (61), Expect = 5.8
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = +3
Query: 195 PPDPQCPPETAVRPSTARSVSDRAGTSRMLPL*PGNRCPAPTGTARRTER 344
PPDP TAR AG + P+ G P+ T TAR+++R
Sbjct: 164 PPDPPAAATAGPTSKTARRSKRLAGEAPETPVEAGQTSPSST-TARQSKR 212
>02_02_0347 + 9222556-9222927
Length = 123
Score = 28.7 bits (61), Expect = 5.8
Identities = 26/74 (35%), Positives = 28/74 (37%), Gaps = 3/74 (4%)
Frame = -1
Query: 382 RAGRE---RAPPGTVHLSVRRAVPVGAGHLFPGYNGSMREVPARSETDLAVEGRTAVSGG 212
RAGRE R PP S AV VG GH G R P R+ V+ G
Sbjct: 51 RAGREPQRRRPPPPWTRSAAEAVAVGKGHC-QGEQRRWRRRPWRTRVATTVDEGDG-DAG 108
Query: 211 HCGSGGRHVHGSAG 170
H GG V G
Sbjct: 109 HGARGGGPVERDDG 122
>12_01_0346 + 2652181-2653566
Length = 461
Score = 28.3 bits (60), Expect = 7.6
Identities = 24/102 (23%), Positives = 34/102 (33%)
Frame = -1
Query: 394 SPHIRAGRERAPPGTVHLSVRRAVPVGAGHLFPGYNGSMREVPARSETDLAVEGRTAVSG 215
SP +R E P V + V AG G+ R V A + + A +
Sbjct: 113 SPEVRRAAEHLPYKIVDWCTMAHIEVNAGA-----GGAARSVYASDVASMVIAELKARAE 167
Query: 214 GHCGSGGRHVHGSAGHLPLVPVDEPAPRLTTCGPQLRLVSVR 89
GG+ VH + +P D P L +VR
Sbjct: 168 ARLAGGGKKVHNAVVTVPYYFSDGPREAAMNAARMAGLTTVR 209
>10_06_0039 -
9966744-9967535,9968241-9968482,9969021-9969223,
9969333-9970645
Length = 849
Score = 28.3 bits (60), Expect = 7.6
Identities = 15/49 (30%), Positives = 18/49 (36%)
Frame = +3
Query: 171 PAEPCTCRPPDPQCPPETAVRPSTARSVSDRAGTSRMLPL*PGNRCPAP 317
PA PP P P P T S A ++ + P N PAP
Sbjct: 283 PAPAAAAPPPAPPAPRSRRTPPRTRFSAGSGAEMNKQMASPPSNPPPAP 331
>09_04_0109 - 14674980-14675004,14675861-14676468
Length = 210
Score = 28.3 bits (60), Expect = 7.6
Identities = 22/54 (40%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Frame = +3
Query: 192 RPPDPQCPPETAVRPSTARSVSDRAGTSRMLPL*PGNRC---PAPTGTARRTER 344
RPP P+ A+RP A +VS +LP PG RC P PT A T R
Sbjct: 29 RPP-PKVAASFALRPMVAAAVSPPPRHRLLLPPPPG-RCLLHPPPTVAASFTHR 80
>05_01_0395 +
3118480-3119097,3119699-3119989,3120063-3120114,
3120395-3120546
Length = 370
Score = 28.3 bits (60), Expect = 7.6
Identities = 19/50 (38%), Positives = 22/50 (44%)
Frame = -1
Query: 292 YNGSMREVPARSETDLAVEGRTAVSGGHCGSGGRHVHGSAGHLPLVPVDE 143
Y G E A E D A EGR G GR HG A L L+P+ +
Sbjct: 319 YRGEKEERRAE-EDDAAGEGRVVTDGAARDGPGRR-HGHAHDLQLLPLTD 366
>05_01_0201 - 1441063-1443836,1444658-1445758,1446367-1447179,
1447386-1447440
Length = 1580
Score = 28.3 bits (60), Expect = 7.6
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = -1
Query: 202 SGGRHVHGSAGHLPLVPVDEPAPRLTTCGPQLRLV 98
S G VHGS P VD+PA P+ RLV
Sbjct: 1401 SSGSSVHGSKSKPPSPKVDKPASSRLLSNPRERLV 1435
>04_04_1019 +
30166514-30166585,30167207-30167841,30168505-30168645,
30169604-30170300
Length = 514
Score = 28.3 bits (60), Expect = 7.6
Identities = 14/22 (63%), Positives = 14/22 (63%)
Frame = -1
Query: 229 TAVSGGHCGSGGRHVHGSAGHL 164
TAV GG CG GG GS GHL
Sbjct: 134 TAVGGG-CGGGGGGGGGSGGHL 154
>03_01_0235 - 1842909-1843498,1844380-1844569
Length = 259
Score = 28.3 bits (60), Expect = 7.6
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = -1
Query: 232 RTAVSGGHCGSGGRHVHGSAGHLPLVPVDEPAPRLTTCGPQL 107
R G G RH HG G P P EPA G L
Sbjct: 151 RWRTKGSQEGRSRRHGHGGVGDEPTAPGGEPAAEPAASGDGL 192
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,502,159
Number of Sequences: 37544
Number of extensions: 419615
Number of successful extensions: 2144
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1976
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2133
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2197677108
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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