Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP11_T7_I22
(881 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 38 0.007
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 38 0.007
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 38 0.007
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 36 0.038
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 36 0.051
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 36 0.051
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 36 0.051
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 32 0.62
Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical pr... 31 1.4
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 29 3.3
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 29 3.3
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 29 4.4
AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like ... 29 4.4
AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like ... 29 4.4
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 24 4.9
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 29 5.8
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 5.8
AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like ... 28 7.7
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 28 7.7
AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical ... 28 7.7
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 38.3 bits (85), Expect = 0.007
Identities = 25/94 (26%), Positives = 26/94 (27%), Gaps = 2/94 (2%)
Frame = +2
Query: 452 PPPPXXXXFFFXXX--PPPPXGGGGXKXKXFFFXXXGGGGXXXXXXXXXPPPXXXXXXXP 625
PPPP PPPP G + G PPP P
Sbjct: 240 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 299
Query: 626 PPPPXGXXKKKKKKXXXXXXXPPPXXXXXXXPPP 727
PPPP G PPP PPP
Sbjct: 300 PPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP 333
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 38.3 bits (85), Expect = 0.007
Identities = 25/94 (26%), Positives = 26/94 (27%), Gaps = 2/94 (2%)
Frame = +2
Query: 452 PPPPXXXXFFFXXX--PPPPXGGGGXKXKXFFFXXXGGGGXXXXXXXXXPPPXXXXXXXP 625
PPPP PPPP G + G PPP P
Sbjct: 261 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 320
Query: 626 PPPPXGXXKKKKKKXXXXXXXPPPXXXXXXXPPP 727
PPPP G PPP PPP
Sbjct: 321 PPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP 354
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 38.3 bits (85), Expect = 0.007
Identities = 25/94 (26%), Positives = 26/94 (27%), Gaps = 2/94 (2%)
Frame = +2
Query: 452 PPPPXXXXFFFXXX--PPPPXGGGGXKXKXFFFXXXGGGGXXXXXXXXXPPPXXXXXXXP 625
PPPP PPPP G + G PPP P
Sbjct: 246 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 305
Query: 626 PPPPXGXXKKKKKKXXXXXXXPPPXXXXXXXPPP 727
PPPP G PPP PPP
Sbjct: 306 PPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP 339
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 35.9 bits (79), Expect = 0.038
Identities = 22/78 (28%), Positives = 24/78 (30%)
Frame = +2
Query: 494 PPPPXGGGGXKXKXFFFXXXGGGGXXXXXXXXXPPPXXXXXXXPPPPPXGXXKKKKKKXX 673
PPPP G G G PPP PPPPP G + +
Sbjct: 128 PPPPKGTGSPPPPPTGEPQDLSG---EGNASRRPPPPPKGTGSPPPPPTGEPQDLSTEGN 184
Query: 674 XXXXXPPPXXXXXXXPPP 727
PPP PPP
Sbjct: 185 ASRRPPPPPKGTGTPPPP 202
Score = 35.5 bits (78), Expect = 0.051
Identities = 15/45 (33%), Positives = 17/45 (37%)
Frame = +2
Query: 593 PPPXXXXXXXPPPPPXGXXKKKKKKXXXXXXXPPPXXXXXXXPPP 727
PPP PPPPP G + + PPP PPP
Sbjct: 64 PPPPPKGTGTPPPPPTGEPQDLSAEEGNASRRPPPPPKGTGTPPP 108
Score = 35.5 bits (78), Expect = 0.051
Identities = 22/78 (28%), Positives = 24/78 (30%)
Frame = +2
Query: 494 PPPPXGGGGXKXKXFFFXXXGGGGXXXXXXXXXPPPXXXXXXXPPPPPXGXXKKKKKKXX 673
PPPP G G G PPP PPPPP G + +
Sbjct: 221 PPPPKGTGSPTPPPTGEPQDLSG---EGNASRRPPPPPKGTGSPPPPPTGEPQDLSGEGN 277
Query: 674 XXXXXPPPXXXXXXXPPP 727
PPP PPP
Sbjct: 278 ASRRPPPPPKGTGTPPPP 295
Score = 35.1 bits (77), Expect = 0.067
Identities = 15/45 (33%), Positives = 17/45 (37%)
Frame = +2
Query: 593 PPPXXXXXXXPPPPPXGXXKKKKKKXXXXXXXPPPXXXXXXXPPP 727
PPP PPPPP G + + PPP PPP
Sbjct: 33 PPPPPKGTGTPPPPPTGEPQDLSGEGNASRRPPPPPKGTGTPPPP 77
Score = 35.1 bits (77), Expect = 0.067
Identities = 15/45 (33%), Positives = 17/45 (37%)
Frame = +2
Query: 593 PPPXXXXXXXPPPPPXGXXKKKKKKXXXXXXXPPPXXXXXXXPPP 727
PPP PPPPP G + + PPP PPP
Sbjct: 96 PPPPPKGTGTPPPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPP 140
Score = 35.1 bits (77), Expect = 0.067
Identities = 15/45 (33%), Positives = 17/45 (37%)
Frame = +2
Query: 593 PPPXXXXXXXPPPPPXGXXKKKKKKXXXXXXXPPPXXXXXXXPPP 727
PPP PPPPP G + + PPP PPP
Sbjct: 127 PPPPPKGTGSPPPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPP 171
Score = 32.3 bits (70), Expect = 0.47
Identities = 14/45 (31%), Positives = 16/45 (35%)
Frame = +2
Query: 593 PPPXXXXXXXPPPPPXGXXKKKKKKXXXXXXXPPPXXXXXXXPPP 727
PPP PPPPP G + + PPP PP
Sbjct: 189 PPPPPKGTGTPPPPPTGEPQDLSAEGYASRRPPPPPKGTGSPTPP 233
Score = 31.9 bits (69), Expect = 0.62
Identities = 14/45 (31%), Positives = 16/45 (35%)
Frame = +2
Query: 593 PPPXXXXXXXPPPPPXGXXKKKKKKXXXXXXXPPPXXXXXXXPPP 727
PPP P PPP G + + PPP PPP
Sbjct: 220 PPPPPKGTGSPTPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPP 264
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 35.5 bits (78), Expect = 0.051
Identities = 24/72 (33%), Positives = 24/72 (33%), Gaps = 5/72 (6%)
Frame = +2
Query: 452 PPPPXXXXFFFXXXPPPPXGG-----GGXKXKXFFFXXXGGGGXXXXXXXXXPPPXXXXX 616
PPPP PPPP GG GG GG PPP
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPP----PPGGLPPISGGPPPPPPPPGGCP 769
Query: 617 XXPPPPPXGXXK 652
PPPPP G K
Sbjct: 770 PPPPPPPPGGFK 781
Score = 35.1 bits (77), Expect = 0.067
Identities = 20/62 (32%), Positives = 20/62 (32%)
Frame = +2
Query: 452 PPPPXXXXFFFXXXPPPPXGGGGXKXKXFFFXXXGGGGXXXXXXXXXPPPXXXXXXXPPP 631
PPPP PPPP GG GG PPP PPP
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
Query: 632 PP 637
PP
Sbjct: 773 PP 774
Score = 30.3 bits (65), Expect = 1.9
Identities = 20/64 (31%), Positives = 20/64 (31%)
Frame = +2
Query: 452 PPPPXXXXFFFXXXPPPPXGGGGXKXKXFFFXXXGGGGXXXXXXXXXPPPXXXXXXXPPP 631
PPPP PPPP GG G PPP PPP
Sbjct: 729 PPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPP-PPPGGFKGGPPPP 787
Query: 632 PPXG 643
PP G
Sbjct: 788 PPPG 791
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 35.5 bits (78), Expect = 0.051
Identities = 24/72 (33%), Positives = 24/72 (33%), Gaps = 5/72 (6%)
Frame = +2
Query: 452 PPPPXXXXFFFXXXPPPPXGG-----GGXKXKXFFFXXXGGGGXXXXXXXXXPPPXXXXX 616
PPPP PPPP GG GG GG PPP
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPP----PPGGLPPISGGPPPPPPPPGGCP 769
Query: 617 XXPPPPPXGXXK 652
PPPPP G K
Sbjct: 770 PPPPPPPPGGFK 781
Score = 35.1 bits (77), Expect = 0.067
Identities = 20/62 (32%), Positives = 20/62 (32%)
Frame = +2
Query: 452 PPPPXXXXFFFXXXPPPPXGGGGXKXKXFFFXXXGGGGXXXXXXXXXPPPXXXXXXXPPP 631
PPPP PPPP GG GG PPP PPP
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
Query: 632 PP 637
PP
Sbjct: 773 PP 774
Score = 30.3 bits (65), Expect = 1.9
Identities = 20/64 (31%), Positives = 20/64 (31%)
Frame = +2
Query: 452 PPPPXXXXFFFXXXPPPPXGGGGXKXKXFFFXXXGGGGXXXXXXXXXPPPXXXXXXXPPP 631
PPPP PPPP GG G PPP PPP
Sbjct: 729 PPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPP-PPPGGFKGGPPPP 787
Query: 632 PPXG 643
PP G
Sbjct: 788 PPPG 791
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 35.5 bits (78), Expect = 0.051
Identities = 24/72 (33%), Positives = 24/72 (33%), Gaps = 5/72 (6%)
Frame = +2
Query: 452 PPPPXXXXFFFXXXPPPPXGG-----GGXKXKXFFFXXXGGGGXXXXXXXXXPPPXXXXX 616
PPPP PPPP GG GG GG PPP
Sbjct: 297 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPP----PPGGLPPISGGPPPPPPPPGGCP 352
Query: 617 XXPPPPPXGXXK 652
PPPPP G K
Sbjct: 353 PPPPPPPPGGFK 364
Score = 35.1 bits (77), Expect = 0.067
Identities = 20/62 (32%), Positives = 20/62 (32%)
Frame = +2
Query: 452 PPPPXXXXFFFXXXPPPPXGGGGXKXKXFFFXXXGGGGXXXXXXXXXPPPXXXXXXXPPP 631
PPPP PPPP GG GG PPP PPP
Sbjct: 296 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 355
Query: 632 PP 637
PP
Sbjct: 356 PP 357
Score = 30.3 bits (65), Expect = 1.9
Identities = 20/64 (31%), Positives = 20/64 (31%)
Frame = +2
Query: 452 PPPPXXXXFFFXXXPPPPXGGGGXKXKXFFFXXXGGGGXXXXXXXXXPPPXXXXXXXPPP 631
PPPP PPPP GG G PPP PPP
Sbjct: 312 PPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPP-PPPGGFKGGPPPP 370
Query: 632 PPXG 643
PP G
Sbjct: 371 PPPG 374
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 31.9 bits (69), Expect = 0.62
Identities = 21/61 (34%), Positives = 23/61 (37%)
Frame = -3
Query: 657 FFFXXPXGGGGGXXXXXXXGGGXXXXXXXXXPPPPXXXKKKXFXFXPPPPXGGGGXXKKK 478
F F GGGGG GG PPPP PPPP G G +KK
Sbjct: 18 FLFPMAGGGGGG-------GGCAPAAPACAPPPPPMCGCAPPPPPPPPPPMCGCGCGRKK 70
Query: 477 K 475
+
Sbjct: 71 R 71
Score = 29.9 bits (64), Expect = 2.5
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +2
Query: 554 GGGGXXXXXXXXXPPPXXXXXXXPPPPP 637
GGGG PPP PPPPP
Sbjct: 28 GGGGCAPAAPACAPPPPPMCGCAPPPPP 55
>Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical
protein T04F8.8 protein.
Length = 165
Score = 30.7 bits (66), Expect = 1.4
Identities = 19/77 (24%), Positives = 24/77 (31%)
Frame = +2
Query: 497 PPPXGGGGXKXKXFFFXXXGGGGXXXXXXXXXPPPXXXXXXXPPPPPXGXXKKKKKKXXX 676
PPP GG + + GGGG PPP P P P + + +
Sbjct: 70 PPPFDGGYNRP----YGGGGGGGYGRPQGYVPPPPPPPTQPEPEPEPRPEPQPEPQPEPQ 125
Query: 677 XXXXPPPXXXXXXXPPP 727
P P P P
Sbjct: 126 PEPQPEPQPEPHPEPAP 142
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 29.5 bits (63), Expect = 3.3
Identities = 18/67 (26%), Positives = 20/67 (29%)
Frame = +2
Query: 497 PPPXGGGGXKXKXFFFXXXGGGGXXXXXXXXXPPPXXXXXXXPPPPPXGXXKKKKKKXXX 676
P GG G K ++ GG PPP PPPPP
Sbjct: 636 PGARGGAGAKANKGWYGSGGGSSMPMPV----PPPGGLGGFMPPPPPPPPMPGDLSSLLA 691
Query: 677 XXXXPPP 697
PPP
Sbjct: 692 AAPPPPP 698
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 29.5 bits (63), Expect = 3.3
Identities = 18/67 (26%), Positives = 20/67 (29%)
Frame = +2
Query: 497 PPPXGGGGXKXKXFFFXXXGGGGXXXXXXXXXPPPXXXXXXXPPPPPXGXXKKKKKKXXX 676
P GG G K ++ GG PPP PPPPP
Sbjct: 636 PGARGGAGAKANKGWYGSGGGSSMPMPV----PPPGGLGGFMPPPPPPPPMPGDLSSLLA 691
Query: 677 XXXXPPP 697
PPP
Sbjct: 692 AAPPPPP 698
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.1 bits (62), Expect = 4.4
Identities = 23/77 (29%), Positives = 23/77 (29%), Gaps = 8/77 (10%)
Frame = -3
Query: 657 FFFXXPXGGGGGXXXXXXXGGGXXXXXXXXXPPPPXXXK--------KKXFXFXPPPPXG 502
F F GGGGG GGG PP P PPP
Sbjct: 20 FLFPSAGGGGGGGGCGGGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPC 79
Query: 501 GGGXXKKKKXXXXGGGG 451
GGG GGGG
Sbjct: 80 GGGCGGGGGGCGGGGGG 96
Score = 29.1 bits (62), Expect = 4.4
Identities = 19/63 (30%), Positives = 22/63 (34%)
Frame = -3
Query: 636 GGGGGXXXXXXXGGGXXXXXXXXXPPPPXXXKKKXFXFXPPPPXGGGGXXKKKKXXXXGG 457
GGGG GG PPPP P P GGG ++ GG
Sbjct: 278 GGGGSSGGYAGSSGGGGYSAPAAAPPPPPPPPPPP---APAPVSSGGGYSEQSS---GGG 331
Query: 456 GGA 448
GG+
Sbjct: 332 GGS 334
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.1 bits (62), Expect = 4.4
Identities = 23/77 (29%), Positives = 23/77 (29%), Gaps = 8/77 (10%)
Frame = -3
Query: 657 FFFXXPXGGGGGXXXXXXXGGGXXXXXXXXXPPPPXXXK--------KKXFXFXPPPPXG 502
F F GGGGG GGG PP P PPP
Sbjct: 20 FLFPSAGGGGGGGGCGGGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPC 79
Query: 501 GGGXXKKKKXXXXGGGG 451
GGG GGGG
Sbjct: 80 GGGCGGGGGGCGGGGGG 96
Score = 29.1 bits (62), Expect = 4.4
Identities = 19/63 (30%), Positives = 22/63 (34%)
Frame = -3
Query: 636 GGGGGXXXXXXXGGGXXXXXXXXXPPPPXXXKKKXFXFXPPPPXGGGGXXKKKKXXXXGG 457
GGGG GG PPPP P P GGG ++ GG
Sbjct: 278 GGGGSSGGYAGSSGGGGYSAPAAAPPPPPPPPPPP---APAPVSSGGGYSEQSS---GGG 331
Query: 456 GGA 448
GG+
Sbjct: 332 GGS 334
>AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform b protein.
Length = 453
Score = 29.1 bits (62), Expect = 4.4
Identities = 18/52 (34%), Positives = 19/52 (36%), Gaps = 2/52 (3%)
Frame = +2
Query: 494 PP--PPXGGGGXKXKXFFFXXXGGGGXXXXXXXXXPPPXXXXXXXPPPPPXG 643
PP P GGG + GGGG PPP PPP P G
Sbjct: 29 PPSQPSCGGGAPPCSSSSYATGGGGGSYAAAPALPPPP------PPPPAPIG 74
>AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform a protein.
Length = 393
Score = 29.1 bits (62), Expect = 4.4
Identities = 18/52 (34%), Positives = 19/52 (36%), Gaps = 2/52 (3%)
Frame = +2
Query: 494 PP--PPXGGGGXKXKXFFFXXXGGGGXXXXXXXXXPPPXXXXXXXPPPPPXG 643
PP P GGG + GGGG PPP PPP P G
Sbjct: 29 PPSQPSCGGGAPPCSSSSYATGGGGGSYAAAPALPPPP------PPPPAPIG 74
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 24.2 bits (50), Expect(2) = 4.9
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = +2
Query: 593 PPPXXXXXXXPPPPPXGXXKKKKK 664
PPP PPPPP K K
Sbjct: 88 PPPPPPTLKAPPPPPILGLKTPSK 111
Score = 23.0 bits (47), Expect(2) = 4.9
Identities = 8/18 (44%), Positives = 8/18 (44%)
Frame = +2
Query: 452 PPPPXXXXFFFXXXPPPP 505
PPPP PPPP
Sbjct: 70 PPPPPPLISILQQAPPPP 87
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 28.7 bits (61), Expect = 5.8
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = +2
Query: 452 PPPPXXXXFFFXXXPPPPXGGGGXKXKXFFFXXXGG 559
PPPP F PPPP G G F GG
Sbjct: 742 PPPPMFQQGFNAGAPPPPFGRGAGPMSSFPPPPRGG 777
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 28.7 bits (61), Expect = 5.8
Identities = 11/35 (31%), Positives = 15/35 (42%)
Frame = +2
Query: 623 PPPPPXGXXKKKKKKXXXXXXXPPPXXXXXXXPPP 727
PPPP G K++++ P P PPP
Sbjct: 511 PPPPAPGPHKEQRRSTSKDPPRPAPPPVSSIPPPP 545
>AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like
(grd related) protein29 protein.
Length = 172
Score = 28.3 bits (60), Expect = 7.7
Identities = 17/51 (33%), Positives = 20/51 (39%)
Frame = +2
Query: 509 GGGGXKXKXFFFXXXGGGGXXXXXXXXXPPPXXXXXXXPPPPPXGXXKKKK 661
GGGG + GG G PPP PPPP G +KK+
Sbjct: 38 GGGGGCGGGCGYGGGGGCGYGGGYGCGIPPPP------PPPPQCGCGRKKR 82
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 28.3 bits (60), Expect = 7.7
Identities = 15/47 (31%), Positives = 15/47 (31%), Gaps = 2/47 (4%)
Frame = +2
Query: 593 PPPXXXXXXXPPPPPXGXXKKKKKKXXXXXXXPPP--XXXXXXXPPP 727
PPP PPPPP K PPP PPP
Sbjct: 1346 PPPSDDLTPVPPPPPPPPTMSKAPTGVPLPVPPPPPLFSPSMILPPP 1392
>AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical
protein Y53G8AR.9 protein.
Length = 315
Score = 28.3 bits (60), Expect = 7.7
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = -3
Query: 642 PXGGGGGXXXXXXXGGGXXXXXXXXXPPPP 553
P GGGGG GG PPPP
Sbjct: 188 PGGGGGGMGGGGGSGGSGGGSGRFPPPPPP 217
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,980,719
Number of Sequences: 27780
Number of extensions: 368855
Number of successful extensions: 1700
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 403
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1092
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2223883816
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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