Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP11_T7_I11
(831 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0240 - 21194597-21194743,21195579-21195680,21195797-211958... 35 0.069
05_06_0276 + 26878732-26879574,26879920-26880387,26880800-268810... 32 0.49
05_04_0303 - 20010761-20011756 32 0.64
05_01_0041 + 281427-281549,281671-281730,281822-281868,282013-28... 32 0.64
02_05_1229 - 35092135-35092252,35092662-35092764,35093014-350933... 32 0.64
08_02_0672 - 19904353-19904839,19905646-19905704,19906137-199063... 31 1.1
07_03_1507 - 27228032-27228742 31 1.1
06_02_0108 - 11917186-11917207,11917834-11917943,11918116-11918544 31 1.1
05_03_0482 - 14568108-14568284,14568912-14569970,14570532-145712... 31 1.1
04_03_0176 - 12273045-12273115,12273214-12273413,12273617-122737... 31 1.1
01_01_1064 + 8393519-8394475 31 1.5
09_04_0624 + 19041663-19043792 30 2.0
04_04_1630 - 34896021-34896143,34896329-34896403,34896500-348965... 30 2.6
04_03_0937 + 20923705-20923833,20924001-20924012,20924413-209244... 30 2.6
03_05_1007 - 29637911-29638333,29640095-29640282,29640688-296407... 30 2.6
11_06_0152 + 20669949-20670326,20670887-20670997,20671079-206712... 29 3.4
07_03_0820 - 21749477-21749866,21751192-21751590 29 3.4
04_04_1538 + 34239913-34241274,34241468-34241578 29 3.4
02_05_1154 + 34506915-34507467,34508334-34508388,34508933-34509038 29 3.4
01_07_0122 - 41196081-41196205,41197561-41198245,41198961-411993... 29 3.4
01_06_0624 - 30683249-30684631 29 3.4
12_01_0831 - 7688342-7688772,7690678-7692610,7693142-7693915,769... 29 4.5
11_02_0096 - 8261667-8262083 29 4.5
08_02_1403 + 26811020-26811146,26813351-26813609,26814932-26814983 29 4.5
08_02_0257 - 14963452-14963506,14963784-14964085 29 4.5
04_04_0811 - 28246801-28247049,28247161-28247384,28248236-282484... 29 4.5
04_03_0747 - 19251617-19251781,19252377-19252502,19252606-192527... 29 4.5
12_01_0176 - 1308813-1309640 29 6.0
09_06_0115 + 20944586-20945185 29 6.0
09_02_0202 + 5735613-5736170 29 6.0
06_03_1515 - 30707600-30707613,30708093-30708167,30708596-307086... 29 6.0
03_02_0133 + 5816393-5817877 29 6.0
02_03_0229 + 16617371-16617970 29 6.0
02_01_0367 + 2639024-2640247,2641399-2641536,2641754-2641810 29 6.0
01_06_0489 + 29754298-29754549,29754639-29754772,29755667-297557... 29 6.0
10_08_0868 - 21171425-21171826 28 7.9
09_06_0371 + 22615809-22617431,22618312-22618422,22619361-226194... 28 7.9
09_02_0080 - 4020020-4020047,4020160-4022044,4022079-4022817 28 7.9
08_01_0109 + 813688-813769,814157-814272 28 7.9
07_01_0633 - 4735298-4735485,4736083-4736114,4736203-4736297,473... 28 7.9
02_05_0092 + 25749070-25750638 28 7.9
02_04_0221 - 21021886-21022144,21022227-21022345,21022681-210229... 28 7.9
02_02_0476 - 10751647-10753323 28 7.9
02_01_0742 + 5524149-5524214,5524609-5524641,5524750-5524880,552... 28 7.9
>02_04_0240 -
21194597-21194743,21195579-21195680,21195797-21195875,
21195921-21196043,21196135-21196193,21196453-21196974,
21197434-21198177,21198426-21198506
Length = 618
Score = 35.1 bits (77), Expect = 0.069
Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 4/68 (5%)
Frame = +1
Query: 145 LLKRRDRVDTEHITSIPPSHGRRTGGHQRHDHRFPRSAGREPALMAPRYTF-PQSG---R 312
LLK ++ V+ TS + GH H+H+ P + +P AP +F P +G
Sbjct: 93 LLKAQEEVNQTEATSEEGTDHYDANGHNIHEHKLPAVSSEDPVASAPSSSFEPSTGVSSS 152
Query: 313 GNAVCHHP 336
G C P
Sbjct: 153 GEKKCQDP 160
>05_06_0276 +
26878732-26879574,26879920-26880387,26880800-26881021,
26881153-26881278,26881309-26881573,26881719-26881936
Length = 713
Score = 32.3 bits (70), Expect = 0.49
Identities = 18/55 (32%), Positives = 25/55 (45%)
Frame = +1
Query: 94 AAHNRRPTSDRAGAQSGLLKRRDRVDTEHITSIPPSHGRRTGGHQRHDHRFPRSA 258
+A RR D + +SG RR R S+ P R G H+ H+ PRS+
Sbjct: 227 SARERRADRDESNGESGRSSRRGR-------SVSPEEHRHRGRHESQSHQSPRSS 274
>05_04_0303 - 20010761-20011756
Length = 331
Score = 31.9 bits (69), Expect = 0.64
Identities = 23/67 (34%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Frame = +3
Query: 81 TKNSCRSQPAPYLGPGRSPVGAIETAGQG*HRAHYIHPTVPRTPD-RWPPATRPPVPSFS 257
T++ + P P+L PGR+P G H+ HP P+ PA RP S
Sbjct: 199 TEHLFATGPVPFLPPGRAPAGGDPYPPFAPMGGHHHHP--PQIGHFHHHPAARPLGHYGS 256
Query: 258 GPRARFD 278
GP A FD
Sbjct: 257 GPGAGFD 263
>05_01_0041 +
281427-281549,281671-281730,281822-281868,282013-282089,
285368-285440,286193-286281,286665-286711,286805-286885,
287011-287179,287381-287600,287679-287744,288194-288310,
288591-288628,288935-289032
Length = 434
Score = 31.9 bits (69), Expect = 0.64
Identities = 20/46 (43%), Positives = 21/46 (45%)
Frame = +2
Query: 257 RAESPL*WRRVTPSPRAVGGTRSAITRLPIAGERASTPPHVWVSPR 394
R +SP RR PSP GGT S PI S PP SPR
Sbjct: 283 RPDSPPIRRRTAPSPIRHGGTPSRRPGSPIRRRSPSPPPRRLRSPR 328
>02_05_1229 -
35092135-35092252,35092662-35092764,35093014-35093315,
35093849-35094171
Length = 281
Score = 31.9 bits (69), Expect = 0.64
Identities = 16/33 (48%), Positives = 17/33 (51%)
Frame = -3
Query: 286 AAPSKRALGPLNEGTGGRVAGGHRSGVRGTVGW 188
AA KRA GP + G VA GH G VGW
Sbjct: 83 AAGGKRAEGPTATTSPGTVASGHPHSSFGVVGW 115
>08_02_0672 -
19904353-19904839,19905646-19905704,19906137-19906352,
19906845-19907422,19907506-19908180,19908263-19908653,
19909469-19909621,19909727-19909980,19911023-19911479
Length = 1089
Score = 31.1 bits (67), Expect = 1.1
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 7/64 (10%)
Frame = +3
Query: 192 PTVPRTPDRWPPATRPPVPSFSGPRARFDGAALHLPPERSGE-------RGLPSPGFLLR 350
PT+P P PP PP+ SF+ P R GA PP + + G+P+PG+ +
Sbjct: 54 PTLPPPPMSTPPVVAPPMHSFA-PSFRPLGAPPPPPPPQQVQVQVPPQYGGVPNPGYPMA 112
Query: 351 VSVQ 362
+Q
Sbjct: 113 QQMQ 116
>07_03_1507 - 27228032-27228742
Length = 236
Score = 31.1 bits (67), Expect = 1.1
Identities = 24/73 (32%), Positives = 32/73 (43%)
Frame = +3
Query: 195 TVPRTPDRWPPATRPPVPSFSGPRARFDGAALHLPPERSGERGLPSPGFLLRVSVQARHP 374
TVP +PP +R P+ G R R G P R+GE +P L S R P
Sbjct: 130 TVPLASP-FPPLSRVPLRRAVGRRRRPSGRGCAAPVGRAGEAAFGAPSRL--PSGPGRQP 186
Query: 375 TSGSLPAQNGWDP 413
+ + A + WDP
Sbjct: 187 PAPA-GAADAWDP 198
>06_02_0108 - 11917186-11917207,11917834-11917943,11918116-11918544
Length = 186
Score = 31.1 bits (67), Expect = 1.1
Identities = 25/104 (24%), Positives = 39/104 (37%), Gaps = 1/104 (0%)
Frame = +3
Query: 66 WELNLTKNSCRSQ-PAPYLGPGRSPVGAIETAGQG*HRAHYIHPTVPRTPDRWPPATRPP 242
W+ + +SC++ P P + T G I P+ PRT P PP
Sbjct: 56 WQALHSADSCQTNTPPPQISLNTHTAAVENTRTTGWTDEARISPSPPRTARTRGPVPAPP 115
Query: 243 VPSFSGPRARFDGAALHLPPERSGERGLPSPGFLLRVSVQARHP 374
+P G + ER G P+ +++R S + HP
Sbjct: 116 LPLLGEGEDGGGGGGGGVGGEREVGAGQPAI-YMMRTSTPSIHP 158
>05_03_0482 -
14568108-14568284,14568912-14569970,14570532-14571236,
14571376-14571656,14571748-14571769
Length = 747
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +3
Query: 171 HRAHYIHPTVPRTP-DRWPPATRPPVPSFSGPRARFDGAALHLPPERS 311
HRA ++ + R+P D + ATRPP P S P D A L + RS
Sbjct: 49 HRAPFLAAAIKRSPRDIYRTATRPPEPLTSSPPGDPDLARLFVGLARS 96
>04_03_0176 -
12273045-12273115,12273214-12273413,12273617-12273714,
12274573-12274629,12274710-12274846,12275085-12275142,
12275620-12275718,12275827-12275885,12278554-12278624,
12280763-12281019
Length = 368
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/54 (35%), Positives = 21/54 (38%)
Frame = -2
Query: 341 EAG*WQTAFPRPLWGKV*RGAIKAGSRPAERGNRWSCRWWPPVRRPWDGGMDVM 180
+ G W+ A R G V GA E RWWPP R DGG M
Sbjct: 32 DGGGWEGARGRGAMGGVPAGAFGLWFSMEESSREG--RWWPPARADGDGGRKKM 83
>01_01_1064 + 8393519-8394475
Length = 318
Score = 30.7 bits (66), Expect = 1.5
Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Frame = +2
Query: 188 PSHRPTDAGPVATSDTTTGSLVQRAESPL*WRRVTPSPRAVGGT-RSAITRLPIAGERAS 364
PS + +TS +++ S A+S RR++ +G T S A ER+S
Sbjct: 176 PSDSFASSSSSSTSTSSSSSSSSSAKSTR--RRISLRDLLLGSTANSDSATAAAAAERSS 233
Query: 365 T--PPHVWVSPRTKRVGPLAL 421
PP +W S R+K+ LAL
Sbjct: 234 GFWPPSIWPSSRSKKTATLAL 254
>09_04_0624 + 19041663-19043792
Length = 709
Score = 30.3 bits (65), Expect = 2.0
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +2
Query: 266 SPL*WRRVTPSPRAVGGTRSAITRLPIAGERASTPPHVWVS 388
S L WRR+ RA G R+ I+ ++G + TP V V+
Sbjct: 490 SELQWRRMVDDLRAKGSLRNCISVCDVSGSMSGTPMDVCVA 530
>04_04_1630 -
34896021-34896143,34896329-34896403,34896500-34896556,
34897176-34897352,34897426-34897492,34898043-34898101,
34898188-34898241,34898455-34898604,34898709-34898918,
34898980-34899039,34899399-34899527,34899616-34899720,
34899935-34900024,34900630-34900695,34901047-34901115,
34901348-34901467,34901572-34901634,34901681-34901817,
34902070-34902160,34902298-34902463,34902700-34904172,
34905666-34905940,34906322-34906819,34906996-34907145,
34907840-34907911,34908006-34908266,34908478-34908558,
34908745-34908996,34909323-34909382,34909602-34909853,
34910385-34910549,34910589-34910849,34911267-34912307,
34913398-34913457,34914055-34914165,34914448-34914534,
34915227-34915300,34915397-34915490,34915644-34915689,
34916397-34916521
Length = 2501
Score = 29.9 bits (64), Expect = 2.6
Identities = 22/55 (40%), Positives = 27/55 (49%), Gaps = 7/55 (12%)
Frame = +3
Query: 192 PTVPRTPDRWPPATRPP-------VPSFSGPRARFDGAALHLPPERSGERGLPSP 335
P+ P T D PP RPP V SFS P R AL + P+ + +R PSP
Sbjct: 264 PSAPATADDPPPPPRPPAEPPVAAVVSFS-PAKR--ARALSVSPKTTAKRAKPSP 315
>04_03_0937 +
20923705-20923833,20924001-20924012,20924413-20924473,
20924523-20924749,20924859-20925104,20925645-20925657,
20927681-20928302,20928320-20928949,20928960-20929224
Length = 734
Score = 29.9 bits (64), Expect = 2.6
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +3
Query: 219 WPPATRPPVPSFSGPRARFDGAALH 293
W + PP P F G R R G ALH
Sbjct: 515 WGSTSSPPPPPFGGGRRRITGYALH 539
>03_05_1007 -
29637911-29638333,29640095-29640282,29640688-29640773,
29641108-29641173,29641289-29641331,29641398-29642328
Length = 578
Score = 29.9 bits (64), Expect = 2.6
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = +3
Query: 222 PPATRPPVPSFSGPRARFDGAALHLPPERSGER 320
PP P PS AR+ G PPE SG R
Sbjct: 85 PPGETSPSPSPPSAEARYGGGTAQTPPEISGIR 117
>11_06_0152 + 20669949-20670326,20670887-20670997,20671079-20671280,
20671393-20671675,20672145-20672234,20672366-20672473,
20672595-20672975,20673250-20673324,20673685-20673797,
20676233-20676742,20676807-20677300
Length = 914
Score = 29.5 bits (63), Expect = 3.4
Identities = 29/90 (32%), Positives = 34/90 (37%), Gaps = 7/90 (7%)
Frame = -1
Query: 357 RSPAIGSRVMADRVPPTALGEGVTRRHQSGLSAR*TREPVVVSLVATGPASV-----GRW 193
R + + P A R SGL AR +V SL+ G GR
Sbjct: 802 RRRVVAALAAGGAAPSVAASLARVMRSGSGLEARVDAARLVESLLRDGGEDDEVRRDGRR 861
Query: 192 DGCNVLCVNPVPPFQ*PRL--GSGPVRGRA 109
G V V VPP Q P G G V+GRA
Sbjct: 862 GGGGVRAVGGVPPVQGPARGGGGGGVQGRA 891
>07_03_0820 - 21749477-21749866,21751192-21751590
Length = 262
Score = 29.5 bits (63), Expect = 3.4
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = +3
Query: 189 HPTVPRTPDRWPPATRPPVPSFSGPRARFDG 281
H +PR P WPP PP RA DG
Sbjct: 35 HSLLPRPPALWPPPPPPPPHGCERRRAFHDG 65
>04_04_1538 + 34239913-34241274,34241468-34241578
Length = 490
Score = 29.5 bits (63), Expect = 3.4
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Frame = +1
Query: 79 SLKTPAAHNRRPTSDRAGAQSGLLKRRDRVDTE----HITSIPPSHGRRTGGHQRHD 237
+LK AHN R +R G + G+ + D + E ++ + P GRR G RHD
Sbjct: 95 NLKFVDAHNAR-ADERGGFRLGMNRFADLTNGEFRATYLGTTPAGRGRRVGEAYRHD 150
>02_05_1154 + 34506915-34507467,34508334-34508388,34508933-34509038
Length = 237
Score = 29.5 bits (63), Expect = 3.4
Identities = 27/78 (34%), Positives = 33/78 (42%), Gaps = 6/78 (7%)
Frame = +3
Query: 198 VPRTPDR--WPPATRPPVPSFS---GPRARFD-GAALHLPPERSGERGLPSPGFLLRVSV 359
VP P R +P PP PSFS P + G LP + R LP P L V
Sbjct: 69 VPAQPQRRRFPRCFTPPAPSFSAGVAPEPAYSRGKLYRLPHDPLHPRLLPRPS-LAHECV 127
Query: 360 QARHPTSGSLPAQNGWDP 413
G+ PAQ+G+ P
Sbjct: 128 ----GKGGAAPAQDGFQP 141
>01_07_0122 -
41196081-41196205,41197561-41198245,41198961-41199329,
41199405-41199514,41200539-41200833
Length = 527
Score = 29.5 bits (63), Expect = 3.4
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = -3
Query: 247 GTGGRVAGGHRSGVRGTVGWM*CALC 170
G GGR GG R G G +GW C C
Sbjct: 26 GRGGRGGGGGRGG-SGRLGWWWCCCC 50
>01_06_0624 - 30683249-30684631
Length = 460
Score = 29.5 bits (63), Expect = 3.4
Identities = 25/69 (36%), Positives = 34/69 (49%), Gaps = 8/69 (11%)
Frame = +3
Query: 228 ATRPPVPSFSGPRARFDG---AALH-LPPE----RSGERGLPSPGFLLRVSVQARHPTSG 383
A R PV + + R +G AAL L PE R+ RGL P + +V V RHP +G
Sbjct: 285 AVRAPVAADADSTKRLEGRGEAALESLLPEGFLDRTWGRGLVLPSWAPQVEV-LRHPATG 343
Query: 384 SLPAQNGWD 410
+ GW+
Sbjct: 344 AFVTHCGWN 352
>12_01_0831 -
7688342-7688772,7690678-7692610,7693142-7693915,
7694019-7694142,7696084-7696189,7696346-7696532
Length = 1184
Score = 29.1 bits (62), Expect = 4.5
Identities = 23/67 (34%), Positives = 30/67 (44%)
Frame = +3
Query: 201 PRTPDRWPPATRPPVPSFSGPRARFDGAALHLPPERSGERGLPSPGFLLRVSVQARHPTS 380
P TP W P+T P + + PR A+ PP RS PSP +R ++
Sbjct: 183 PPTPS-WRPSTPPSAKTLTPPRRSPSPASTLTPPRRS-----PSPA--------SRRMST 228
Query: 381 GSLPAQN 401
GS PA N
Sbjct: 229 GSTPALN 235
>11_02_0096 - 8261667-8262083
Length = 138
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +1
Query: 106 RRPTSDRAGAQSGLLKRRDRVDTEHITSIPPSHGRRTGG 222
RRP +GA SG +RR+ D T + P GR GG
Sbjct: 23 RRPRPVESGASSGATRRRESSD----TGLGPRRGRPPGG 57
>08_02_1403 + 26811020-26811146,26813351-26813609,26814932-26814983
Length = 145
Score = 29.1 bits (62), Expect = 4.5
Identities = 25/77 (32%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Frame = +3
Query: 33 PDPHPRGRWGMWE-LNLTKNSCRSQPAPYLGPGRSPVGAIETAGQG*HRAHYIHPTVPRT 209
P P R G + L +T Q PY P P GA+ QG +H ++P P+
Sbjct: 22 PVPSDRDDEGFSQPLIITARVGYPQSGPY--PYPPPSGAVYPP-QGYPSSHGVYPP-PQG 77
Query: 210 PDRWPPATRPPVPSFSG 260
P +PP +PP P + G
Sbjct: 78 P--YPPPHQPPPPGYQG 92
>08_02_0257 - 14963452-14963506,14963784-14964085
Length = 118
Score = 29.1 bits (62), Expect = 4.5
Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = +3
Query: 141 GAIETAGQG*HRAHYIHPTVPRTPDRWPPATRPPVPSFSGPRAR-FDGAALHL 296
G +E G+G RA + P P +W RP +P G A F G AL L
Sbjct: 64 GHVEGGGRGRGRAPAVAEETPCAPSKWDELVRPILP--DGEMALFFQGKALPL 114
>04_04_0811 -
28246801-28247049,28247161-28247384,28248236-28248435,
28248612-28248888,28249035-28249104
Length = 339
Score = 29.1 bits (62), Expect = 4.5
Identities = 17/39 (43%), Positives = 17/39 (43%), Gaps = 3/39 (7%)
Frame = +3
Query: 18 HGRKSPDPHPRGRWGMW---ELNLTKNSCRSQPAPYLGP 125
HG K R RW W E LT SCR PAP P
Sbjct: 30 HGYKVYGRGGRRRWERWVEREFVLTPASCREVPAPVAPP 68
>04_03_0747 -
19251617-19251781,19252377-19252502,19252606-19252716,
19252931-19253679,19254034-19254167,19254595-19254740,
19255166-19255336,19255977-19256828
Length = 817
Score = 29.1 bits (62), Expect = 4.5
Identities = 19/51 (37%), Positives = 22/51 (43%), Gaps = 3/51 (5%)
Frame = +3
Query: 192 PTVPRTPDRWPPATRPPVPSFSGP-RARFDGAALHLPPERS--GERGLPSP 335
P TP P TRPPVP ++ P AR PP + G PSP
Sbjct: 139 PMPTPTPTPTPTPTRPPVPVWAAPLPARTPTPTPSAPPRAAAPSPAGTPSP 189
>12_01_0176 - 1308813-1309640
Length = 275
Score = 28.7 bits (61), Expect = 6.0
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = +3
Query: 213 DRWPPATRPPVPSFSGPRARFDGAALHLPPERSGERGLPSP 335
DR P PP PS S P AA P RG P P
Sbjct: 3 DRVHPMPAPPPPSSSPPPGHDAAAATETTPLHPSFRGAPPP 43
>09_06_0115 + 20944586-20945185
Length = 199
Score = 28.7 bits (61), Expect = 6.0
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -2
Query: 230 RWWPPVRRPWDGGMDVM 180
RWWPP R DGG M
Sbjct: 180 RWWPPARADGDGGRKKM 196
>09_02_0202 + 5735613-5736170
Length = 185
Score = 28.7 bits (61), Expect = 6.0
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +3
Query: 345 LRVSVQARHPTSGSL--PAQNGWDP*LLGGQVTDTTPVPTPCSAAAGFCVV 491
+R + A HP+S + P P +GG+ D++ P P AAG VV
Sbjct: 72 MRANAAAYHPSSPAAAPPPPAQAQPVGVGGRAIDSSAAPAPAHTAAGAGVV 122
>06_03_1515 -
30707600-30707613,30708093-30708167,30708596-30708647,
30708751-30708831,30709145-30709219,30709870-30709977,
30710026-30710032,30710133-30710268,30710361-30710685
Length = 290
Score = 28.7 bits (61), Expect = 6.0
Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +2
Query: 281 RRVTPSPR-AVGGTRSAITRLPIAGERASTPPHVWVSPRTKRV 406
R V+PSP AV TR + R P+A R PP W P R+
Sbjct: 12 RFVSPSPSPAVAATRRRL-RFPLAPPRPRPPPLRWSPPSPFRL 53
>03_02_0133 + 5816393-5817877
Length = 494
Score = 28.7 bits (61), Expect = 6.0
Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Frame = -1
Query: 393 RGETQTWGGVLARSPAIGSRVMADRVPPTALGEGVTRRHQSG--LSAR*TREPVVVSLVA 220
R GG +AR+ A GSR+ + A G+T H+S L +R P V++
Sbjct: 45 RANAARLGGAVARAAAAGSRIRVHALALPAEAAGLTGGHESADDLPSRELAGPFAVAVDL 104
Query: 219 TGP 211
P
Sbjct: 105 LAP 107
>02_03_0229 + 16617371-16617970
Length = 199
Score = 28.7 bits (61), Expect = 6.0
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -2
Query: 230 RWWPPVRRPWDGGMDVM 180
RWWPP R DGG M
Sbjct: 180 RWWPPARADGDGGRKKM 196
>02_01_0367 + 2639024-2640247,2641399-2641536,2641754-2641810
Length = 472
Score = 28.7 bits (61), Expect = 6.0
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +3
Query: 186 IHPTVPRTPDRWPPATRPPVPSFSGPRARFDGAALHLPP 302
IHP+V A+RPP SG A FD ++ LPP
Sbjct: 81 IHPSVFPVKKSPKTASRPPTRQLSGLSAVFDPSSDLLPP 119
>01_06_0489 +
29754298-29754549,29754639-29754772,29755667-29755721,
29755888-29756007,29756048-29756140,29756360-29756474,
29756728-29757077,29757264-29757332,29757902-29758509,
29758577-29758646
Length = 621
Score = 28.7 bits (61), Expect = 6.0
Identities = 19/52 (36%), Positives = 23/52 (44%), Gaps = 4/52 (7%)
Frame = +2
Query: 209 AGPVATSDTTTGSLVQRAESPL*WRRVTPSPRAV--GG--TRSAITRLPIAG 352
AGP A G+ V A P+ WR PR V GG R+ P+AG
Sbjct: 14 AGPTARGVLLGGAFVTAARPPVAWRCRATLPRRVRLGGVVARAGAAETPVAG 65
>10_08_0868 - 21171425-21171826
Length = 133
Score = 28.3 bits (60), Expect = 7.9
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = +3
Query: 201 PRTPDRWPPATRPPVPSFSGPRARFDGAALHL 296
P TP PPA RPP P D LH+
Sbjct: 28 PPTPKPKPPAPRPPTPGGGAGSCPRDALKLHV 59
>09_06_0371 +
22615809-22617431,22618312-22618422,22619361-22619453,
22619562-22619661,22619754-22619834,22620774-22621047,
22621254-22622069,22622921-22623029,22623509-22623602,
22623881-22623939,22624150-22624197
Length = 1135
Score = 28.3 bits (60), Expect = 7.9
Identities = 19/49 (38%), Positives = 24/49 (48%)
Frame = +3
Query: 249 SFSGPRARFDGAALHLPPERSGERGLPSPGFLLRVSVQARHPTSGSLPA 395
S S A G ALH R RGL SP +R S+ + + +G LPA
Sbjct: 107 SSSAAAAAAAGVALHASLFR---RGLESPDRFIRASLLSLYAAAGDLPA 152
>09_02_0080 - 4020020-4020047,4020160-4022044,4022079-4022817
Length = 883
Score = 28.3 bits (60), Expect = 7.9
Identities = 13/45 (28%), Positives = 20/45 (44%)
Frame = +3
Query: 198 VPRTPDRWPPATRPPVPSFSGPRARFDGAALHLPPERSGERGLPS 332
+P P PPA PP+P+ S P + +PP + P+
Sbjct: 523 MPAPPIPMPPAPAPPIPTPSMPFPTVPAPPVTVPPATAPSMAAPA 567
>08_01_0109 + 813688-813769,814157-814272
Length = 65
Score = 28.3 bits (60), Expect = 7.9
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = -3
Query: 637 VAKIEPXLSCLASWHRCLAAMSHGRL 560
VA++ P L+CL S+ R LAAM R+
Sbjct: 4 VAELLPELACLGSFFRVLAAMEAPRI 29
>07_01_0633 -
4735298-4735485,4736083-4736114,4736203-4736297,
4736414-4736487,4736682-4736817,4736902-4736965,
4737101-4737166,4737265-4737446,4737824-4737948,
4738031-4738169,4738250-4738369,4738675-4738746,
4738900-4738935,4739633-4739749,4739821-4739953,
4740053-4740156,4740243-4740370,4740880-4741010,
4741561-4741757,4743906-4744583
Length = 938
Score = 28.3 bits (60), Expect = 7.9
Identities = 20/54 (37%), Positives = 24/54 (44%)
Frame = -3
Query: 280 PSKRALGPLNEGTGGRVAGGHRSGVRGTVGWM*CALCQPCPAVSIAPTGLRPGP 119
P+ A G + GTGG GG G RG G PA++ AP PGP
Sbjct: 60 PAPAAGGVVGRGTGGGGGGGRGDGGRGR-GRGGGGGDGVRPAMAAAPAASTPGP 112
>02_05_0092 + 25749070-25750638
Length = 522
Score = 28.3 bits (60), Expect = 7.9
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = -1
Query: 375 WGGVLARSPAIGSRVMADRVPPTALGEGV 289
+GGVLA +PA +AD PP AL +GV
Sbjct: 43 FGGVLAAAPAPAP--VADVAPPAALDDGV 69
>02_04_0221 -
21021886-21022144,21022227-21022345,21022681-21022920,
21023064-21023171,21023272-21023331,21023991-21024066,
21024155-21024360,21024722-21024784,21024925-21025012,
21025515-21026015,21027206-21027603
Length = 705
Score = 28.3 bits (60), Expect = 7.9
Identities = 20/70 (28%), Positives = 28/70 (40%), Gaps = 2/70 (2%)
Frame = +3
Query: 132 SPVGAIETAGQG*HRAHYIHP--TVPRTPDRWPPATRPPVPSFSGPRARFDGAALHLPPE 305
SP +++ G + + P T P TP RW P GP+ + G L P
Sbjct: 30 SPRDSVDLGGTSAYPSACASPSSTTP-TPTRWGAGASAVPPRCPGPQDQHHGLPLPRPVS 88
Query: 306 RSGERGLPSP 335
+S L SP
Sbjct: 89 KSAPMPLASP 98
>02_02_0476 - 10751647-10753323
Length = 558
Score = 28.3 bits (60), Expect = 7.9
Identities = 22/83 (26%), Positives = 31/83 (37%)
Frame = +3
Query: 225 PATRPPVPSFSGPRARFDGAALHLPPERSGERGLPSPGFLLRVSVQARHPTSGSLPAQNG 404
PA +PP +SGP D L ++ E + L R+ + + PA
Sbjct: 423 PAAQPPARYYSGPVPAVDSVFL----DKMREYLMADAKGLCRIDAPINNGEHAAAPAPAA 478
Query: 405 WDP*LLGGQVTDTTPVPTPCSAA 473
DP D P+P P AA
Sbjct: 479 DDPLAAQHGHGDAPPLPVPPDAA 501
>02_01_0742 +
5524149-5524214,5524609-5524641,5524750-5524880,
5525174-5525282,5525406-5525522,5525896-5525961,
5526314-5526376,5526459-5526503,5526690-5526751,
5526974-5527067,5527375-5527467,5527561-5527630,
5527816-5527892,5527976-5528033,5528135-5528166,
5528245-5528376
Length = 415
Score = 28.3 bits (60), Expect = 7.9
Identities = 15/59 (25%), Positives = 28/59 (47%)
Frame = -1
Query: 396 VRGETQTWGGVLARSPAIGSRVMADRVPPTALGEGVTRRHQSGLSAR*TREPVVVSLVA 220
+RG++Q G +L PA+ ++ D + L + RHQ L + +E + + A
Sbjct: 101 IRGDSQLMGQLLQNDPALAQAILGDDI--NELQNTLRSRHQQRLELKRKQEEELALMYA 157
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,959,637
Number of Sequences: 37544
Number of extensions: 679900
Number of successful extensions: 2753
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 2444
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2743
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2291695380
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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