Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP11_T7_I01
(793 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC29B12.02c |set2||histone lysine methyltransferase Set2 |Schi... 28 1.8
SPCC970.04c |mob2||protein kinase activator Mob2|Schizosaccharom... 27 2.3
SPCC70.05c |||serine/threonine protein kinase |Schizosaccharomyc... 27 3.1
SPAC26F1.01 |sec74|SPAPJ691.01c|guanyl-nucleotide exchange facto... 26 7.1
SPAC23H4.01c ||SPAP27G11.01|sterol binding ankyrin repeat protei... 26 7.1
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 26 7.1
SPAC328.06 |ubp2||ubiquitin C-terminal hydrolase Ubp2|Schizosacc... 25 9.4
SPBC23E6.09 |ssn6||transcriptional corepressor Ssn6|Schizosaccha... 25 9.4
SPAC521.04c |||calcium permease |Schizosaccharomyces pombe|chr 1... 25 9.4
>SPAC29B12.02c |set2||histone lysine methyltransferase Set2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 798
Score = 27.9 bits (59), Expect = 1.8
Identities = 16/65 (24%), Positives = 28/65 (43%)
Frame = -1
Query: 394 RSRWKLHTRPSRPNGKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLATKGSTSEL 215
+S W T + G +S + + S G + SPS+S+PS A+ S S+
Sbjct: 21 KSSWSKDTIAVQAVGSSPSSSSSHDFESKEDAEGMNKDESAPSPSTSSPSSASSRSQSKY 80
Query: 214 THRHS 200
+ +
Sbjct: 81 VRKEA 85
>SPCC970.04c |mob2||protein kinase activator
Mob2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 244
Score = 27.5 bits (58), Expect = 2.3
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = -1
Query: 298 NGAFRHHKHRSPSSSNPSLATKGSTSELTHRHSPLSFSPDLL 173
N + RH SSS+ S + K STS+L SP S P L
Sbjct: 14 NRSKRHQNLSDASSSSGSFSKKSSTSQLVRTGSP-SVEPTAL 54
>SPCC70.05c |||serine/threonine protein kinase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 781
Score = 27.1 bits (57), Expect = 3.1
Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 4/91 (4%)
Frame = -1
Query: 397 HRSRWKLHTRPSRPNGKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNPS--LATKGST 224
H+S+ H + S PN + + P R S+ G+ + + S + S L +K
Sbjct: 179 HKSQSYQHLKNSPPNSRTARKPVPRRANSASHNLGSTKSPNGNAKESLSRSAELPSKAKP 238
Query: 223 SELT--HRHSPLSFSPDLLSGSRFRPGGRFS 137
E+ +R P SP+ S R R GG S
Sbjct: 239 MEINNGYRKKPSPLSPN--SSIRNREGGNGS 267
>SPAC26F1.01 |sec74|SPAPJ691.01c|guanyl-nucleotide exchange factor
Sec74|Schizosaccharomyces pombe|chr 1|||Manual
Length = 928
Score = 25.8 bits (54), Expect = 7.1
Identities = 16/53 (30%), Positives = 25/53 (47%)
Frame = -1
Query: 349 KPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLATKGSTSELTHRHSPLS 191
KPS +R G S ++ A K S S P + T +++ +HSP+S
Sbjct: 24 KPSPPLPSRRKGKS-ALRSALE--KKNRKSKSKPKVTITSDTPKVSSQHSPVS 73
>SPAC23H4.01c ||SPAP27G11.01|sterol binding ankyrin repeat
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 945
Score = 25.8 bits (54), Expect = 7.1
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +3
Query: 210 WVSSLVEPFVASDGFDEDGDRCLWCLK 290
W P VA D DEDG +W LK
Sbjct: 898 WEPRWFVPSVAGDDEDEDGSGPIWQLK 924
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 25.8 bits (54), Expect = 7.1
Identities = 28/93 (30%), Positives = 37/93 (39%)
Frame = -1
Query: 415 TT*EPSHRSRWKLHTRPSRPNGKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLAT 236
TT PS S + S + S+S + SS S + + S SSS+ S+
Sbjct: 151 TTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSVPI 210
Query: 235 KGSTSELTHRHSPLSFSPDLLSGSRFRPGGRFS 137
STS +H S S S S S RP S
Sbjct: 211 TSSTSS-SHSSSSSSSSS---SSSSSRPSSSSS 239
>SPAC328.06 |ubp2||ubiquitin C-terminal hydrolase
Ubp2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1141
Score = 25.4 bits (53), Expect = 9.4
Identities = 14/58 (24%), Positives = 25/58 (43%)
Frame = -1
Query: 394 RSRWKLHTRPSRPNGKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLATKGSTS 221
++R LH + R GKP +YG I + + P ++P+ + +TS
Sbjct: 66 KTRKHLHVKVRRDRGKPLIEEPEENYGIKDRIPVYYEEEELPEPHVTSPTKSEFATTS 123
>SPBC23E6.09 |ssn6||transcriptional corepressor
Ssn6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1102
Score = 25.4 bits (53), Expect = 9.4
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -2
Query: 330 KHVITDPPDPLTVLLGTTSTGH 265
+H++ +PP PLTVL GH
Sbjct: 499 RHILDNPPKPLTVLDIYFQIGH 520
>SPAC521.04c |||calcium permease |Schizosaccharomyces pombe|chr
1|||Manual
Length = 881
Score = 25.4 bits (53), Expect = 9.4
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = -1
Query: 301 INGAFRHHKHRSPSSSNPSLATKGSTSELTHRHSPLSFSP 182
+NG +HH +R +SS L++ GS +E + H P + P
Sbjct: 664 VNGNSQHHHNRDDASS--GLSSNGSENE-SLEHEPTNELP 700
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,578,125
Number of Sequences: 5004
Number of extensions: 47470
Number of successful extensions: 138
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 126
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 134
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 385381248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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