Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP11_T7_H22
         (1151 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_1121 + 27767707-27768065,27768612-27769034,27770013-277701...    30   3.0  
05_04_0132 + 18303925-18307164                                         29   6.9  

>06_03_1121 +
           27767707-27768065,27768612-27769034,27770013-27770175,
           27770271-27770381,27770895-27770963,27771117-27771203,
           27771967-27772752
          Length = 665

 Score = 30.3 bits (65), Expect = 3.0
 Identities = 14/31 (45%), Positives = 16/31 (51%)
 Frame = -3

Query: 174 GXPKXFGXXXGFPKGFPRAPGFFXK*FPLXG 82
           G P  FG   GFP   PR PG F +  P+ G
Sbjct: 504 GMPDPFGVPRGFPPFGPRFPGDFARGGPMPG 534


>05_04_0132 + 18303925-18307164
          Length = 1079

 Score = 29.1 bits (62), Expect = 6.9
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = +3

Query: 348 GGGPXXXPPPPXIXEKXRGFFF 413
           GGG    PPPP I E+  G FF
Sbjct: 205 GGGARVAPPPPLIDEEALGDFF 226


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,008,400
Number of Sequences: 37544
Number of extensions: 328728
Number of successful extensions: 1179
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 804
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1111
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3503158800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)