Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP11_T7_H19
         (750 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U05596-1|AAA50748.1| 1232|Homo sapiens anion exchanger 3 brain i...    31   5.8  
L27213-1|AAB05850.1|  932|Homo sapiens anion exchange protein pr...    31   5.8  
BC146656-1|AAI46657.1| 1232|Homo sapiens solute carrier family 4...    31   5.8  
AY142112-1|AAN34939.1| 1259|Homo sapiens anion exchanger SLC4A3 ...    31   5.8  

>U05596-1|AAA50748.1| 1232|Homo sapiens anion exchanger 3 brain
           isoform protein.
          Length = 1232

 Score = 30.7 bits (66), Expect = 5.8
 Identities = 14/54 (25%), Positives = 29/54 (53%)
 Frame = -3

Query: 259 ATFQLLPSIPYCTTTSGRFLRTNKTALLSASIQASLPSSEIYRQLVDPRHVSSD 98
           AT  L+  +P+    +  F+R N+  LL + ++  +P   ++  ++ P H S+D
Sbjct: 515 ATVVLVGCVPFLEQPAAAFVRLNEAVLLESVLEVPVPVRFLF-VMLGPSHTSTD 567


>L27213-1|AAB05850.1|  932|Homo sapiens anion exchange protein
           protein.
          Length = 932

 Score = 30.7 bits (66), Expect = 5.8
 Identities = 14/54 (25%), Positives = 29/54 (53%)
 Frame = -3

Query: 259 ATFQLLPSIPYCTTTSGRFLRTNKTALLSASIQASLPSSEIYRQLVDPRHVSSD 98
           AT  L+  +P+    +  F+R N+  LL + ++  +P   ++  ++ P H S+D
Sbjct: 219 ATVVLVGCVPFLEQPAAAFVRLNEAVLLESVLEVPVPVRFLF-VMLGPSHTSTD 271


>BC146656-1|AAI46657.1| 1232|Homo sapiens solute carrier family 4,
           anion exchanger, member 3 protein.
          Length = 1232

 Score = 30.7 bits (66), Expect = 5.8
 Identities = 14/54 (25%), Positives = 29/54 (53%)
 Frame = -3

Query: 259 ATFQLLPSIPYCTTTSGRFLRTNKTALLSASIQASLPSSEIYRQLVDPRHVSSD 98
           AT  L+  +P+    +  F+R N+  LL + ++  +P   ++  ++ P H S+D
Sbjct: 515 ATVVLVGCVPFLEQPAAAFVRLNEAVLLESVLEVPVPVRFLF-VMLGPSHTSTD 567


>AY142112-1|AAN34939.1| 1259|Homo sapiens anion exchanger SLC4A3
           protein.
          Length = 1259

 Score = 30.7 bits (66), Expect = 5.8
 Identities = 14/54 (25%), Positives = 29/54 (53%)
 Frame = -3

Query: 259 ATFQLLPSIPYCTTTSGRFLRTNKTALLSASIQASLPSSEIYRQLVDPRHVSSD 98
           AT  L+  +P+    +  F+R N+  LL + ++  +P   ++  ++ P H S+D
Sbjct: 542 ATVVLVGCVPFLEQPAAAFVRLNEAVLLESVLEVPVPVRFLF-VMLGPSHTSTD 594


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 51,100,162
Number of Sequences: 237096
Number of extensions: 905026
Number of successful extensions: 1825
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1815
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1825
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9015132854
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)