Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP11_T7_H16
         (720 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL035425-2|CAB90290.1| 1257|Homo sapiens insulin receptor substr...    33   0.78 
AF007567-1|AAC51738.1| 1257|Homo sapiens insulin receptor substr...    33   0.78 
BC003413-1|AAH03413.1|  217|Homo sapiens nucleolar protein famil...    30   9.6  
AJ276003-1|CAB76563.1|  217|Homo sapiens GAR1 protein protein.         30   9.6  

>AL035425-2|CAB90290.1| 1257|Homo sapiens insulin receptor substrate
           4 protein.
          Length = 1257

 Score = 33.5 bits (73), Expect = 0.78
 Identities = 14/29 (48%), Positives = 15/29 (51%)
 Frame = -2

Query: 404 KKXXXXXPPPXXKNPPPXGGXGGXKKXGG 318
           K+     PPP    PPP GG GG  K GG
Sbjct: 623 KQQQMPPPPPPPPPPPPAGGTGGKGKSGG 651



 Score = 30.3 bits (65), Expect = 7.3
 Identities = 12/22 (54%), Positives = 12/22 (54%)
 Frame = -1

Query: 381 PPPXKKPPPXGXXGGGKKKXGG 316
           PPP   PPP     GGK K GG
Sbjct: 630 PPPPPPPPPPAGGTGGKGKSGG 651



 Score = 29.9 bits (64), Expect = 9.6
 Identities = 12/23 (52%), Positives = 12/23 (52%)
 Frame = -1

Query: 381 PPPXKKPPPXGXXGGGKKKXGGF 313
           PPP   PPP G  GG  K  G F
Sbjct: 631 PPPPPPPPPAGGTGGKGKSGGRF 653


>AF007567-1|AAC51738.1| 1257|Homo sapiens insulin receptor substrate
           4 protein.
          Length = 1257

 Score = 33.5 bits (73), Expect = 0.78
 Identities = 14/29 (48%), Positives = 15/29 (51%)
 Frame = -2

Query: 404 KKXXXXXPPPXXKNPPPXGGXGGXKKXGG 318
           K+     PPP    PPP GG GG  K GG
Sbjct: 623 KQQQMPPPPPPPPPPPPAGGTGGKGKSGG 651



 Score = 30.3 bits (65), Expect = 7.3
 Identities = 12/22 (54%), Positives = 12/22 (54%)
 Frame = -1

Query: 381 PPPXKKPPPXGXXGGGKKKXGG 316
           PPP   PPP     GGK K GG
Sbjct: 630 PPPPPPPPPPAGGTGGKGKSGG 651



 Score = 29.9 bits (64), Expect = 9.6
 Identities = 12/23 (52%), Positives = 12/23 (52%)
 Frame = -1

Query: 381 PPPXKKPPPXGXXGGGKKKXGGF 313
           PPP   PPP G  GG  K  G F
Sbjct: 631 PPPPPPPPPAGGTGGKGKSGGRF 653


>BC003413-1|AAH03413.1|  217|Homo sapiens nucleolar protein family
           A, member 1 (H/ACA small nucleolar RNPs) protein.
          Length = 217

 Score = 29.9 bits (64), Expect = 9.6
 Identities = 15/35 (42%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
 Frame = -2

Query: 380 PPXXKNPPPXGGXG--GXKKXGGGXXKKKKGXFXG 282
           PP  K PP  GG G  G  + GGG    + G F G
Sbjct: 161 PPGEKGPPRGGGRGGRGGGRGGGGRGGGRGGGFRG 195


>AJ276003-1|CAB76563.1|  217|Homo sapiens GAR1 protein protein.
          Length = 217

 Score = 29.9 bits (64), Expect = 9.6
 Identities = 15/35 (42%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
 Frame = -2

Query: 380 PPXXKNPPPXGGXG--GXKKXGGGXXKKKKGXFXG 282
           PP  K PP  GG G  G  + GGG    + G F G
Sbjct: 161 PPGEKGPPRGGGRGGRGGGRGGGGRGGGRGGGFRG 195


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,370,190
Number of Sequences: 237096
Number of extensions: 1331183
Number of successful extensions: 9180
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3178
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7264
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8455186714
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)