Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP11_T7_H12
(990 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 34 0.18
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 34 0.18
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 34 0.18
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 32 0.73
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 32 0.73
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 32 0.73
AL008868-1|CAA15515.2| 213|Caenorhabditis elegans Hypothetical ... 25 1.7
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 30 2.9
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 30 2.9
U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homolog... 29 3.9
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro... 29 3.9
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 5.1
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 25 7.3
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 25 7.5
U58748-9|AAB52969.3| 542|Caenorhabditis elegans Hypothetical pr... 24 7.6
U58748-8|AAM97986.1| 497|Caenorhabditis elegans Hypothetical pr... 24 7.6
U58748-7|AAM97987.1| 399|Caenorhabditis elegans Hypothetical pr... 24 7.8
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 33.9 bits (74), Expect = 0.18
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = -2
Query: 989 PPPPPPPXXXXXXXXXXXXXGGGXXXXXXXXXPPPPP 879
PPPPPPP GG PPPPP
Sbjct: 297 PPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP 333
Score = 30.7 bits (66), Expect = 1.7
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = -1
Query: 987 PPPPPPXXXXXXXXXXXXXXGGGXXXXXXXXXPPPPP 877
PPPPPP GG PPPPP
Sbjct: 297 PPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP 333
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 33.9 bits (74), Expect = 0.18
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = -2
Query: 989 PPPPPPPXXXXXXXXXXXXXGGGXXXXXXXXXPPPPP 879
PPPPPPP GG PPPPP
Sbjct: 318 PPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP 354
Score = 30.7 bits (66), Expect = 1.7
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = -1
Query: 987 PPPPPPXXXXXXXXXXXXXXGGGXXXXXXXXXPPPPP 877
PPPPPP GG PPPPP
Sbjct: 318 PPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP 354
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 33.9 bits (74), Expect = 0.18
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = -2
Query: 989 PPPPPPPXXXXXXXXXXXXXGGGXXXXXXXXXPPPPP 879
PPPPPPP GG PPPPP
Sbjct: 303 PPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP 339
Score = 30.7 bits (66), Expect = 1.7
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = -1
Query: 987 PPPPPPXXXXXXXXXXXXXXGGGXXXXXXXXXPPPPP 877
PPPPPP GG PPPPP
Sbjct: 303 PPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP 339
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.9 bits (69), Expect = 0.73
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = -1
Query: 990 PPPPPPPXXXXXXXXXXXXXXGGGXXXXXXXXXPPPPPP 874
PPPPPP GG PPPPPP
Sbjct: 727 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPP 765
Score = 29.5 bits (63), Expect = 3.9
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = -1
Query: 987 PPPPPPXXXXXXXXXXXXXXGGGXXXXXXXXXPPPPPPXFF 865
PPPPPP GG PPPPPP F
Sbjct: 758 PPPPPPPPGGCPPPPPPPPPGG-----FKGGPPPPPPPGMF 793
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.9 bits (69), Expect = 0.73
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = -1
Query: 990 PPPPPPPXXXXXXXXXXXXXXGGGXXXXXXXXXPPPPPP 874
PPPPPP GG PPPPPP
Sbjct: 727 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPP 765
Score = 29.5 bits (63), Expect = 3.9
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = -1
Query: 987 PPPPPPXXXXXXXXXXXXXXGGGXXXXXXXXXPPPPPPXFF 865
PPPPPP GG PPPPPP F
Sbjct: 758 PPPPPPPPGGCPPPPPPPPPGG-----FKGGPPPPPPPGMF 793
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.9 bits (69), Expect = 0.73
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = -1
Query: 990 PPPPPPPXXXXXXXXXXXXXXGGGXXXXXXXXXPPPPPP 874
PPPPPP GG PPPPPP
Sbjct: 310 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPP 348
Score = 29.5 bits (63), Expect = 3.9
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = -1
Query: 987 PPPPPPXXXXXXXXXXXXXXGGGXXXXXXXXXPPPPPPXFF 865
PPPPPP GG PPPPPP F
Sbjct: 341 PPPPPPPPGGCPPPPPPPPPGG-----FKGGPPPPPPPGMF 376
>AL008868-1|CAA15515.2| 213|Caenorhabditis elegans Hypothetical
protein C53C7.3 protein.
Length = 213
Score = 25.4 bits (53), Expect(2) = 1.7
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -1
Query: 891 PPPPPPXFF 865
PPPPPP FF
Sbjct: 177 PPPPPPAFF 185
Score = 23.8 bits (49), Expect(2) = 1.7
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -1
Query: 990 PPPPPPP 970
PPPPPPP
Sbjct: 176 PPPPPPP 182
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 30.3 bits (65), Expect = 2.2
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = +3
Query: 879 GGGGGXXXXXXXXXPPPXXXXXXXXXXXXXGGGGGG 986
GGGGG PPP GGGGGG
Sbjct: 43 GGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGGGG 78
Score = 30.3 bits (65), Expect = 2.2
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = +1
Query: 880 GGGGGXXXXXXXXXPPPXXXXXXXXXXXXXGGGGGG 987
GGGGG PPP GGGGGG
Sbjct: 43 GGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGGGG 78
Score = 29.1 bits (62), Expect = 5.1
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +3
Query: 879 GGGGGXXXXXXXXXPPPXXXXXXXXXXXXXGGGGGGG 989
GGGGG PPP GGG GGG
Sbjct: 100 GGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGCGGG 136
Score = 29.1 bits (62), Expect = 5.1
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +1
Query: 880 GGGGGXXXXXXXXXPPPXXXXXXXXXXXXXGGGGGGG 990
GGGGG PPP GGG GGG
Sbjct: 100 GGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGCGGG 136
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.9 bits (64), Expect = 2.9
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +2
Query: 878 GGGGGXXXXXXXXXPPPXXXXXXXXXXXXXXGGGGGG 988
GGGGG PPP GGGGGG
Sbjct: 60 GGGGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGG 96
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.9 bits (64), Expect = 2.9
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +2
Query: 878 GGGGGXXXXXXXXXPPPXXXXXXXXXXXXXXGGGGGG 988
GGGGG PPP GGGGGG
Sbjct: 60 GGGGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGG 96
>U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homology
domain protein 1 protein.
Length = 1346
Score = 29.5 bits (63), Expect = 3.9
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = -1
Query: 990 PPPPPPPXXXXXXXXXXXXXXGGGXXXXXXXXXPPPPPP 874
PPPPPPP GG PPPPPP
Sbjct: 770 PPPPPPPSAIPLPPRLQ----GGIPPPPPLGIIPPPPPP 804
>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
protein.
Length = 1346
Score = 29.5 bits (63), Expect = 3.9
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = -1
Query: 990 PPPPPPPXXXXXXXXXXXXXXGGGXXXXXXXXXPPPPPP 874
PPPPPPP GG PPPPPP
Sbjct: 770 PPPPPPPSAIPLPPRLQ----GGIPPPPPLGIIPPPPPP 804
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 29.1 bits (62), Expect = 5.1
Identities = 13/39 (33%), Positives = 13/39 (33%)
Frame = -1
Query: 990 PPPPPPPXXXXXXXXXXXXXXGGGXXXXXXXXXPPPPPP 874
PPPPPPP PPPPPP
Sbjct: 1357 PPPPPPPTMSKAPTGVPLPVPPPPPLFSPSMILPPPPPP 1395
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 24.6 bits (51), Expect(2) = 7.3
Identities = 13/41 (31%), Positives = 13/41 (31%), Gaps = 2/41 (4%)
Frame = -1
Query: 990 PPPPPPPXXXXXXXXXXXXXXGG--GXXXXXXXXXPPPPPP 874
PPPPPP G PPPPPP
Sbjct: 574 PPPPPPSSGTRGIAPSRPLPQAPNYGTPENRPHAVPPPPPP 614
Score = 22.2 bits (45), Expect(2) = 7.3
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -1
Query: 891 PPPPPPXFF 865
PPPPPP F
Sbjct: 612 PPPPPPQSF 620
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 24.6 bits (51), Expect(2) = 7.5
Identities = 13/41 (31%), Positives = 13/41 (31%), Gaps = 2/41 (4%)
Frame = -1
Query: 990 PPPPPPPXXXXXXXXXXXXXXGG--GXXXXXXXXXPPPPPP 874
PPPPPP G PPPPPP
Sbjct: 400 PPPPPPSSGTRGIAPSRPLPQAPNYGTPENRPHAVPPPPPP 440
Score = 22.2 bits (45), Expect(2) = 7.5
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -1
Query: 891 PPPPPPXFF 865
PPPPPP F
Sbjct: 438 PPPPPPQSF 446
>U58748-9|AAB52969.3| 542|Caenorhabditis elegans Hypothetical
protein ZK180.5a protein.
Length = 542
Score = 23.8 bits (49), Expect(2) = 7.6
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -1
Query: 990 PPPPPPP 970
PPPPPPP
Sbjct: 65 PPPPPPP 71
Score = 23.0 bits (47), Expect(2) = 7.6
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -1
Query: 891 PPPPPPXF 868
PPPPPP F
Sbjct: 67 PPPPPPAF 74
>U58748-8|AAM97986.1| 497|Caenorhabditis elegans Hypothetical
protein ZK180.5b protein.
Length = 497
Score = 23.8 bits (49), Expect(2) = 7.6
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -1
Query: 990 PPPPPPP 970
PPPPPPP
Sbjct: 65 PPPPPPP 71
Score = 23.0 bits (47), Expect(2) = 7.6
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -1
Query: 891 PPPPPPXF 868
PPPPPP F
Sbjct: 67 PPPPPPAF 74
>U58748-7|AAM97987.1| 399|Caenorhabditis elegans Hypothetical
protein ZK180.5c protein.
Length = 399
Score = 23.8 bits (49), Expect(2) = 7.8
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -1
Query: 990 PPPPPPP 970
PPPPPPP
Sbjct: 65 PPPPPPP 71
Score = 23.0 bits (47), Expect(2) = 7.8
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -1
Query: 891 PPPPPPXF 868
PPPPPP F
Sbjct: 67 PPPPPPAF 74
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,133,681
Number of Sequences: 27780
Number of extensions: 308536
Number of successful extensions: 5764
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 584
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2587
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2584172786
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -