BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP11_T7_G19
(813 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF283275-1|AAG15376.1| 133|Anopheles gambiae small heat shock p... 27 0.52
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T... 26 1.2
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T... 26 1.2
AY752904-1|AAV30078.1| 84|Anopheles gambiae peroxidase 10 prot... 25 3.7
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript... 23 8.5
>AF283275-1|AAG15376.1| 133|Anopheles gambiae small heat shock
protein protein.
Length = 133
Score = 27.5 bits (58), Expect = 0.52
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +2
Query: 44 QNCEE*GIKILRRLQRSRKKHGEDLPTGGRSRRKGEKLE 160
Q EE I I Q ++ G+ P G S+++GEK+E
Sbjct: 94 QKNEERSIPITHTGQPMKQVTGKAAPENGHSKKEGEKME 132
>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
phosphatase protein.
Length = 1977
Score = 26.2 bits (55), Expect = 1.2
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = -1
Query: 219 VRQHQDGS*GQQNCSSLCIYSSFSPFLRDLPPVGRSSPCFFRL 91
+R+H S GQ C+ Y++ P R PV PC+ R+
Sbjct: 1822 LRKHHCRSCGQIFCAECSDYTAHLPEERLYQPVRLCGPCYQRI 1864
>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
phosphatase protein.
Length = 1978
Score = 26.2 bits (55), Expect = 1.2
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = -1
Query: 219 VRQHQDGS*GQQNCSSLCIYSSFSPFLRDLPPVGRSSPCFFRL 91
+R+H S GQ C+ Y++ P R PV PC+ R+
Sbjct: 1823 LRKHHCRSCGQIFCAECSDYTAHLPEERLYQPVRLCGPCYQRI 1865
>AY752904-1|AAV30078.1| 84|Anopheles gambiae peroxidase 10
protein.
Length = 84
Score = 24.6 bits (51), Expect = 3.7
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +1
Query: 562 RRLYPGANSFXYGVRGLMEMDVKSGVVG 645
R LYP + V G++E V GVVG
Sbjct: 8 RALYPHPDDVDLYVGGILEPPVDGGVVG 35
>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
protein.
Length = 1248
Score = 23.4 bits (48), Expect = 8.5
Identities = 8/25 (32%), Positives = 13/25 (52%)
Frame = +3
Query: 372 VCGHDDVFNEGVSWRRGAEYAWNDH 446
+C D N WR + Y+++DH
Sbjct: 181 ICRPDLAANSATCWRILSRYSYSDH 205
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 632,079
Number of Sequences: 2352
Number of extensions: 11032
Number of successful extensions: 20
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 86071221
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -