Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP11_T7_G19
         (813 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical pr...    36   0.034
Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical pr...    36   0.034
AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ...    30   2.3  
Z50756-4|CAA90639.1|  482|Caenorhabditis elegans Hypothetical pr...    28   9.1  
Z50741-5|CAA90612.1|  482|Caenorhabditis elegans Hypothetical pr...    28   9.1  
AL117195-31|CAN99709.1| 1459|Caenorhabditis elegans Hypothetical...    28   9.1  
AL117195-30|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical...    28   9.1  

>Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical
           protein C46C2.1b protein.
          Length = 1677

 Score = 35.9 bits (79), Expect = 0.034
 Identities = 21/52 (40%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
 Frame = -1

Query: 645 TNHPRLNIHFHQSPDAVXEGVRAGVKPP-LSSEAPSAYLTPSSLGMXKGVSP 493
           TNHP LN H  + P A+  G   G  PP L S   +A  TP   G    +SP
Sbjct: 147 TNHPHLNHHVSRIPQAIVTGGTNGSLPPLLISPTSAAAATPLISGKAGPMSP 198


>Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical
           protein C46C2.1a protein.
          Length = 1838

 Score = 35.9 bits (79), Expect = 0.034
 Identities = 21/52 (40%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
 Frame = -1

Query: 645 TNHPRLNIHFHQSPDAVXEGVRAGVKPP-LSSEAPSAYLTPSSLGMXKGVSP 493
           TNHP LN H  + P A+  G   G  PP L S   +A  TP   G    +SP
Sbjct: 147 TNHPHLNHHVSRIPQAIVTGGTNGSLPPLLISPTSAAAATPLISGKAGPMSP 198


>AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical
           protein Y53C10A.10 protein.
          Length = 1582

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 22/85 (25%), Positives = 36/85 (42%), Gaps = 2/85 (2%)
 Frame = -1

Query: 705 PPSPXIXXTSTRXSNPXIPXT--NHPRLNIHFHQSPDAVXEGVRAGVKPPLSSEAPSAYL 532
           P S  I  TS+  + P    T  + P ++    ++     EG    ++   SS +PS + 
Sbjct: 695 PDSTIITSTSSTSTRPGTSSTATDSPTMD-DTSKTSTVTSEGTTLSIESTESSASPSDFT 753

Query: 531 TPSSLGMXKGVSPPYFQVNDESQAS 457
           TP  +G    VS    Q +  S +S
Sbjct: 754 TPDFIGFTSSVSRTSEQYSSSSPSS 778


>Z50756-4|CAA90639.1|  482|Caenorhabditis elegans Hypothetical
           protein T08D10.1 protein.
          Length = 482

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 15/62 (24%), Positives = 25/62 (40%)
 Frame = -1

Query: 702 PSPXIXXTSTRXSNPXIPXTNHPRLNIHFHQSPDAVXEGVRAGVKPPLSSEAPSAYLTPS 523
           P P       +  NP  P T+ P +    HQ P    +  +A V     ++   +  TP+
Sbjct: 52  PVPLPGPRFVKDVNPSPPATSSPNVQTQCHQPPVVRSQTHQASVSQTTPTQTTPSQYTPA 111

Query: 522 SL 517
           S+
Sbjct: 112 SV 113


>Z50741-5|CAA90612.1|  482|Caenorhabditis elegans Hypothetical
           protein T08D10.1 protein.
          Length = 482

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 15/62 (24%), Positives = 25/62 (40%)
 Frame = -1

Query: 702 PSPXIXXTSTRXSNPXIPXTNHPRLNIHFHQSPDAVXEGVRAGVKPPLSSEAPSAYLTPS 523
           P P       +  NP  P T+ P +    HQ P    +  +A V     ++   +  TP+
Sbjct: 52  PVPLPGPRFVKDVNPSPPATSSPNVQTQCHQPPVVRSQTHQASVSQTTPTQTTPSQYTPA 111

Query: 522 SL 517
           S+
Sbjct: 112 SV 113


>AL117195-31|CAN99709.1| 1459|Caenorhabditis elegans Hypothetical
            protein Y57A10A.18b protein.
          Length = 1459

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = -1

Query: 564  PLSSEAPSAYLTPSSLGMXKGVSPP 490
            P+++EAP+A   PS   + +G SPP
Sbjct: 1203 PVAAEAPAAAAAPSRARVPRGPSPP 1227


>AL117195-30|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical
            protein Y57A10A.18a protein.
          Length = 1456

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = -1

Query: 564  PLSSEAPSAYLTPSSLGMXKGVSPP 490
            P+++EAP+A   PS   + +G SPP
Sbjct: 1203 PVAAEAPAAAAAPSRARVPRGPSPP 1227


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,252,523
Number of Sequences: 27780
Number of extensions: 270351
Number of successful extensions: 766
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 744
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 766
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1998381620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)