Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP11_T7_G16
         (856 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U64609-7|AAB04604.3|  373|Caenorhabditis elegans Sperm-specific ...    31   0.79 
U40802-12|AAK19014.2|  265|Caenorhabditis elegans Sperm-specific...    31   0.79 
AC006636-3|AAF39799.1|  139|Caenorhabditis elegans Ground-like (...    31   1.0  
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def...    25   1.6  
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def...    25   1.6  
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.    25   1.6  
AF016446-1|AAC24166.1|   66|Caenorhabditis elegans Hypothetical ...    30   2.4  
Z81088-4|CAB03125.1|  105|Caenorhabditis elegans Hypothetical pr...    29   3.2  
AF025467-2|AAN65301.1|  505|Caenorhabditis elegans Hypothetical ...    29   3.2  
AF025467-1|AAB71039.2|  528|Caenorhabditis elegans Hypothetical ...    29   3.2  
U55366-2|AAA97981.1|  156|Caenorhabditis elegans Hypothetical pr...    29   4.2  
AC024790-13|AAL32247.1|  311|Caenorhabditis elegans Hypothetical...    29   4.2  
Z81053-1|CAB02877.1|  385|Caenorhabditis elegans Hypothetical pr...    29   5.6  
AF016446-2|AAC24165.1|   70|Caenorhabditis elegans Hypothetical ...    29   5.6  
Z79596-2|CAC42251.1|  838|Caenorhabditis elegans Hypothetical pr...    28   7.4  
Z79596-1|CAB01857.1|  830|Caenorhabditis elegans Hypothetical pr...    28   7.4  
L29031-1|AAB72228.2|  830|Caenorhabditis elegans dynamin protein.      28   7.4  
AF167982-1|AAD50438.1|  838|Caenorhabditis elegans dynamin protein.    28   7.4  
AF068713-12|AAC17802.1|  139|Caenorhabditis elegans Ground-like ...    28   9.7  
AC025721-11|AAK29900.1|   78|Caenorhabditis elegans Hypothetical...    28   9.7  

>U64609-7|AAB04604.3|  373|Caenorhabditis elegans Sperm-specific
           family, class qprotein 4 protein.
          Length = 373

 Score = 31.5 bits (68), Expect = 0.79
 Identities = 12/21 (57%), Positives = 12/21 (57%)
 Frame = -3

Query: 545 GGGXXXFXGXPPPPPGXGXGG 483
           GGG   F G PPPP G   GG
Sbjct: 271 GGGPSAFGGAPPPPSGSAMGG 291


>U40802-12|AAK19014.2|  265|Caenorhabditis elegans Sperm-specific
           family, class qprotein 3 protein.
          Length = 265

 Score = 31.5 bits (68), Expect = 0.79
 Identities = 12/21 (57%), Positives = 12/21 (57%)
 Frame = -3

Query: 545 GGGXXXFXGXPPPPPGXGXGG 483
           GGG   F G PPPP G   GG
Sbjct: 165 GGGPSAFGGAPPPPSGSAMGG 185


>AC006636-3|AAF39799.1|  139|Caenorhabditis elegans Ground-like (grd
           related) protein27 protein.
          Length = 139

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 12/21 (57%), Positives = 12/21 (57%)
 Frame = -3

Query: 545 GGGXXXFXGXPPPPPGXGXGG 483
           GGG     G PPPPP  G GG
Sbjct: 25  GGGGGCGCGAPPPPPACGCGG 45



 Score = 30.3 bits (65), Expect = 1.8
 Identities = 13/31 (41%), Positives = 15/31 (48%)
 Frame = +2

Query: 485 PPXXXXGGGGGXXKXXXPPPPXXGXXKKKKK 577
           P     GGGGG      PPPP  G   +KK+
Sbjct: 19  PGLFGMGGGGGCGCGAPPPPPACGCGGRKKR 49


>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
           protein 1, isoformb protein.
          Length = 1437

 Score = 25.4 bits (53), Expect(2) = 1.6
 Identities = 10/21 (47%), Positives = 10/21 (47%)
 Frame = -3

Query: 554 PXGGGGXXXFXGXPPPPPGXG 492
           P   GG     G PPPPP  G
Sbjct: 729 PPPPGGLPPITGGPPPPPPPG 749



 Score = 23.4 bits (48), Expect(2) = 1.6
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -3

Query: 515 PPPPPGXGXGG 483
           PPPPPG   GG
Sbjct: 773 PPPPPGGFKGG 783


>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
           protein 1, isoforma protein.
          Length = 1435

 Score = 25.4 bits (53), Expect(2) = 1.6
 Identities = 10/21 (47%), Positives = 10/21 (47%)
 Frame = -3

Query: 554 PXGGGGXXXFXGXPPPPPGXG 492
           P   GG     G PPPPP  G
Sbjct: 729 PPPPGGLPPITGGPPPPPPPG 749



 Score = 23.4 bits (48), Expect(2) = 1.6
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -3

Query: 515 PPPPPGXGXGG 483
           PPPPPG   GG
Sbjct: 773 PPPPPGGFKGG 783


>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
          Length = 1018

 Score = 25.4 bits (53), Expect(2) = 1.6
 Identities = 10/21 (47%), Positives = 10/21 (47%)
 Frame = -3

Query: 554 PXGGGGXXXFXGXPPPPPGXG 492
           P   GG     G PPPPP  G
Sbjct: 312 PPPPGGLPPITGGPPPPPPPG 332



 Score = 23.4 bits (48), Expect(2) = 1.6
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -3

Query: 515 PPPPPGXGXGG 483
           PPPPPG   GG
Sbjct: 356 PPPPPGGFKGG 366


>AF016446-1|AAC24166.1|   66|Caenorhabditis elegans Hypothetical
           protein C02E7.7 protein.
          Length = 66

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 12/22 (54%), Positives = 12/22 (54%)
 Frame = -2

Query: 546 GGGGXXFFXXPPPPPXXXXGGG 481
           GGGG      PPPPP    GGG
Sbjct: 22  GGGGGCGCAPPPPPPACGCGGG 43



 Score = 29.1 bits (62), Expect = 4.2
 Identities = 12/25 (48%), Positives = 12/25 (48%)
 Frame = -2

Query: 555 PXXGGGGXXFFXXPPPPPXXXXGGG 481
           P  GGGG      PPPP     GGG
Sbjct: 20  PSGGGGGCGCAPPPPPPACGCGGGG 44



 Score = 27.9 bits (59), Expect = 9.7
 Identities = 12/31 (38%), Positives = 13/31 (41%)
 Frame = -1

Query: 565 FXXPPXGGGGXXXFXGXPPPPXXXXGGGXXF 473
           F  P  GGGG       PPP     GGG  +
Sbjct: 17  FLFPSGGGGGCGCAPPPPPPACGCGGGGGGY 47


>Z81088-4|CAB03125.1|  105|Caenorhabditis elegans Hypothetical
           protein F53F1.4 protein.
          Length = 105

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 13/24 (54%), Positives = 13/24 (54%)
 Frame = -3

Query: 554 PXGGGGXXXFXGXPPPPPGXGXGG 483
           P GGGG       PPPPP  G GG
Sbjct: 20  PSGGGGGCG-CAPPPPPPPCGCGG 42


>AF025467-2|AAN65301.1|  505|Caenorhabditis elegans Hypothetical
           protein R148.5b protein.
          Length = 505

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 17/54 (31%), Positives = 18/54 (33%), Gaps = 1/54 (1%)
 Frame = +3

Query: 483 PPPXXXXGGGGXPXKXXXPPPPXG-GXXKKKKKXXXXXXFXXXXXXXXXPPPPP 641
           PPP     G G P     PPP  G G  +          F         PPPPP
Sbjct: 305 PPPPPHFMGRGMPPPFMPPPPHFGMGPPRGFMPPPHPMMFRGGPYPPFFPPPPP 358


>AF025467-1|AAB71039.2|  528|Caenorhabditis elegans Hypothetical
           protein R148.5a protein.
          Length = 528

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 17/54 (31%), Positives = 18/54 (33%), Gaps = 1/54 (1%)
 Frame = +3

Query: 483 PPPXXXXGGGGXPXKXXXPPPPXG-GXXKKKKKXXXXXXFXXXXXXXXXPPPPP 641
           PPP     G G P     PPP  G G  +          F         PPPPP
Sbjct: 305 PPPPPHFMGRGMPPPFMPPPPHFGMGPPRGFMPPPHPMMFRGGPYPPFFPPPPP 358


>U55366-2|AAA97981.1|  156|Caenorhabditis elegans Hypothetical
           protein F41F3.3 protein.
          Length = 156

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 12/25 (48%), Positives = 12/25 (48%)
 Frame = -2

Query: 555 PXXGGGGXXFFXXPPPPPXXXXGGG 481
           P  GGGG      PPPP     GGG
Sbjct: 20  PSGGGGGCGCAPPPPPPSPCGCGGG 44


>AC024790-13|AAL32247.1|  311|Caenorhabditis elegans Hypothetical
           protein Y47D7A.13 protein.
          Length = 311

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 12/22 (54%), Positives = 12/22 (54%)
 Frame = -3

Query: 548 GGGGXXXFXGXPPPPPGXGXGG 483
           GGGG       PPPP G G GG
Sbjct: 22  GGGGGGCCAPPPPPPCGGGCGG 43


>Z81053-1|CAB02877.1|  385|Caenorhabditis elegans Hypothetical
           protein E02A10.2 protein.
          Length = 385

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 11/21 (52%), Positives = 11/21 (52%)
 Frame = -3

Query: 548 GGGGXXXFXGXPPPPPGXGXG 486
           GGGG       PPPPP  G G
Sbjct: 44  GGGGCGGGCAPPPPPPACGGG 64



 Score = 28.7 bits (61), Expect = 5.6
 Identities = 11/21 (52%), Positives = 11/21 (52%)
 Frame = -3

Query: 548 GGGGXXXFXGXPPPPPGXGXG 486
           GGGG       PPPPP  G G
Sbjct: 101 GGGGCGGGCAPPPPPPACGGG 121


>AF016446-2|AAC24165.1|   70|Caenorhabditis elegans Hypothetical
           protein C02E7.6 protein.
          Length = 70

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 13/25 (52%), Positives = 13/25 (52%)
 Frame = -2

Query: 555 PXXGGGGXXFFXXPPPPPXXXXGGG 481
           P  GGGG      PPPPP    GGG
Sbjct: 20  PSGGGGGCG--CAPPPPPACGCGGG 42


>Z79596-2|CAC42251.1|  838|Caenorhabditis elegans Hypothetical
           protein C02C6.1b protein.
          Length = 838

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 12/28 (42%), Positives = 13/28 (46%)
 Frame = -1

Query: 556 PPXGGGGXXXFXGXPPPPXXXXGGGXXF 473
           PP GG G     G  PPP    GGG  +
Sbjct: 782 PPRGGPGAPPPPGMRPPPGAPGGGGGMY 809


>Z79596-1|CAB01857.1|  830|Caenorhabditis elegans Hypothetical
           protein C02C6.1a protein.
          Length = 830

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 12/28 (42%), Positives = 13/28 (46%)
 Frame = -1

Query: 556 PPXGGGGXXXFXGXPPPPXXXXGGGXXF 473
           PP GG G     G  PPP    GGG  +
Sbjct: 782 PPRGGPGAPPPPGMRPPPGAPGGGGGMY 809


>L29031-1|AAB72228.2|  830|Caenorhabditis elegans dynamin protein.
          Length = 830

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 12/28 (42%), Positives = 13/28 (46%)
 Frame = -1

Query: 556 PPXGGGGXXXFXGXPPPPXXXXGGGXXF 473
           PP GG G     G  PPP    GGG  +
Sbjct: 782 PPRGGPGAPPPPGMRPPPGAPGGGGGMY 809


>AF167982-1|AAD50438.1|  838|Caenorhabditis elegans dynamin protein.
          Length = 838

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 12/28 (42%), Positives = 13/28 (46%)
 Frame = -1

Query: 556 PPXGGGGXXXFXGXPPPPXXXXGGGXXF 473
           PP GG G     G  PPP    GGG  +
Sbjct: 782 PPRGGPGAPPPPGMRPPPGAPGGGGGMY 809


>AF068713-12|AAC17802.1|  139|Caenorhabditis elegans Ground-like
           (grd related) protein28 protein.
          Length = 139

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = +2

Query: 506 GGGGXXKXXXPPPPXXGXXKKKKK 577
           GGGG      PPPP  G   +KK+
Sbjct: 26  GGGGGCGCGAPPPPSCGCGGRKKR 49


>AC025721-11|AAK29900.1|   78|Caenorhabditis elegans Hypothetical
           protein Y48G8AL.12 protein.
          Length = 78

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 11/21 (52%), Positives = 11/21 (52%)
 Frame = -1

Query: 565 FXXPPXGGGGXXXFXGXPPPP 503
           F  P  GGGG     G PPPP
Sbjct: 17  FLFPSAGGGGGGCGCGAPPPP 37


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.313    0.147    0.508 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,015,616
Number of Sequences: 27780
Number of extensions: 252671
Number of successful extensions: 2313
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 422
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1260
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2129473654
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)