Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP11_T7_G04
(879 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_03_0005 + 11568545-11569119,11569179-11569191 36 0.057
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 31 0.92
01_06_1670 - 39007402-39008229,39008320-39008567,39009159-390093... 27 1.1
07_03_0116 + 13584689-13584725,13585167-13585234,13586091-135861... 31 1.6
02_05_0686 - 30900748-30902167,30903442-30904742 30 2.1
06_03_1363 - 29576265-29577575 30 2.8
01_01_0083 + 631196-631675 30 2.8
07_03_1136 + 24218601-24218734,24218769-24219906 29 3.7
07_01_0080 + 587674-588510 29 3.7
04_03_0800 - 19820886-19821421,19822476-19822563,19822871-19822888 29 4.9
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 29 4.9
12_01_0033 - 272848-272943,274026-274169,274264-274375,274521-27... 28 8.6
11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-25... 28 8.6
09_06_0125 - 21011757-21012428 28 8.6
07_03_1573 + 27829967-27830338,27830821-27831510,27831594-278317... 28 8.6
06_03_1191 + 28286685-28287008,28287149-28287211,28287377-282874... 28 8.6
01_01_1130 + 8959909-8960396,8960588-8960638,8960736-8960827,896... 28 8.6
01_01_0672 + 5147916-5147976,5148087-5148166,5148329-5148973,514... 24 9.9
>01_03_0005 + 11568545-11569119,11569179-11569191
Length = 195
Score = 35.5 bits (78), Expect = 0.057
Identities = 18/53 (33%), Positives = 21/53 (39%)
Frame = -2
Query: 689 PPXXGGGGGXXXXXPRGGGFXXXXXXXXXPPPPXXXKKKXFFXXPPPPXGGGG 531
PP GGGGG +GGG PP P ++ PPPP G
Sbjct: 114 PPPTGGGGGGGGGWQQGGG-GGGAYPTPPPPNPFLPYFPFYYYSPPPPFYSSG 165
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 31.5 bits (68), Expect = 0.92
Identities = 20/66 (30%), Positives = 22/66 (33%)
Frame = +3
Query: 492 PPPXXKKXFFFXXXPPPXGGGGXXKKXFFFXXXGGGGXXXXXXXXXKPPPXXXXXXXPPP 671
PPP F PPP G + F G +PPP PPP
Sbjct: 42 PPPQGAPPPFLAPPPPPPPGPPPPHQPQFNFGPG-------PPQQQQPPPPPQMYYQPPP 94
Query: 672 PPPXXG 689
PPP G
Sbjct: 95 PPPPYG 100
>01_06_1670 -
39007402-39008229,39008320-39008567,39009159-39009364,
39009454-39011054
Length = 960
Score = 27.1 bits (57), Expect(2) = 1.1
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +3
Query: 630 KPPPXXXXXXXPPPPPP 680
+PPP PPPPPP
Sbjct: 411 QPPPPPTHTHGPPPPPP 427
Score = 22.6 bits (46), Expect(2) = 1.1
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +3
Query: 663 PPPPPPXXG 689
PPPPPP G
Sbjct: 427 PPPPPPPVG 435
>07_03_0116 +
13584689-13584725,13585167-13585234,13586091-13586195,
13587498-13587659,13587771-13587824,13587929-13588078,
13588881-13589090
Length = 261
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = -1
Query: 93 RPGFLGVSPFEGAPRLNGGTPRL 25
+P FLG P E P+LNGG PR+
Sbjct: 208 KPLFLGHFPKELCPKLNGGAPRM 230
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 30.3 bits (65), Expect = 2.1
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +1
Query: 634 PPPRGXXXXXPPPPPXXGG 690
PPP G PPPPP GG
Sbjct: 367 PPPPGGKKGGPPPPPPKGG 385
Score = 28.3 bits (60), Expect = 8.6
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +3
Query: 633 PPPXXXXXXXPPPPPPXXG 689
PPP PPPPPP G
Sbjct: 354 PPPPPPKGPSPPPPPPPGG 372
Score = 28.3 bits (60), Expect = 8.6
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +3
Query: 633 PPPXXXXXXXPPPPPPXXG 689
PPP PPPPPP G
Sbjct: 367 PPPPGGKKGGPPPPPPKGG 385
>06_03_1363 - 29576265-29577575
Length = 436
Score = 29.9 bits (64), Expect = 2.8
Identities = 13/41 (31%), Positives = 17/41 (41%)
Frame = -2
Query: 668 GGXXXXXPRGGGFXXXXXXXXXPPPPXXXKKKXFFXXPPPP 546
GG GGG PPPP +++ + PPPP
Sbjct: 370 GGKACVVAPGGGKVLIVDVTPPPPPPPAARRESWAAPPPPP 410
>01_01_0083 + 631196-631675
Length = 159
Score = 29.9 bits (64), Expect = 2.8
Identities = 15/35 (42%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Frame = -2
Query: 689 PPXXGGGGGXXXXX--PRGGGFXXXXXXXXXPPPP 591
PP GGGGG P GGG PPPP
Sbjct: 78 PPPQGGGGGYIPYYQPPAGGGGGGGGFNYPAPPPP 112
Score = 29.1 bits (62), Expect = 4.9
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = +3
Query: 534 PPPXGGGGXXKKXFFFXXXGGGGXXXXXXXXXKPPP 641
PPP GGGG ++ GGGG PPP
Sbjct: 78 PPPQGGGGGY-IPYYQPPAGGGGGGGGFNYPAPPPP 112
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 29.5 bits (63), Expect = 3.7
Identities = 18/61 (29%), Positives = 19/61 (31%)
Frame = -2
Query: 674 GGGGXXXXXPRGGGFXXXXXXXXXPPPPXXXKKKXFFXXPPPPXGGGGXXKKKXFFXXGG 495
GGGG GG PP PP P GGGG + GG
Sbjct: 93 GGGGAPGPLGGGGARPPGGGGGGGPPSLPPGAGGGGGARPPAPGGGGGGGAPRRVLGGGG 152
Query: 494 G 492
G
Sbjct: 153 G 153
Score = 28.3 bits (60), Expect = 8.6
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -2
Query: 689 PPXXGGGGGXXXXXPRGGG 633
PP GGGGG P GGG
Sbjct: 121 PPGAGGGGGARPPAPGGGG 139
Score = 28.3 bits (60), Expect = 8.6
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -2
Query: 689 PPXXGGGGGXXXXXPRGGG 633
PP GGGGG P GGG
Sbjct: 172 PPGGGGGGGGPGRAPGGGG 190
>07_01_0080 + 587674-588510
Length = 278
Score = 29.5 bits (63), Expect = 3.7
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +3
Query: 591 GGGGXXXXXXXXXKPPPXXXXXXXPPPPPP 680
GG G PPP PPPPPP
Sbjct: 83 GGDGMFRRPPPPPPPPPSSGSPPPPPPPPP 112
>04_03_0800 - 19820886-19821421,19822476-19822563,19822871-19822888
Length = 213
Score = 29.1 bits (62), Expect = 4.9
Identities = 12/35 (34%), Positives = 14/35 (40%)
Frame = -2
Query: 641 GGGFXXXXXXXXXPPPPXXXKKKXFFXXPPPPXGG 537
GG PPP + F+ PPPP GG
Sbjct: 164 GGACGASCKPPPPPPPAIWPPQPSFYYYPPPPCGG 198
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 29.1 bits (62), Expect = 4.9
Identities = 19/66 (28%), Positives = 19/66 (28%)
Frame = +3
Query: 492 PPPXXKKXFFFXXXPPPXGGGGXXKKXFFFXXXGGGGXXXXXXXXXKPPPXXXXXXXPPP 671
PP F PPP GG GG G PP PPP
Sbjct: 1160 PPAPPPPAGFRGGTPPPNAHGGVAPPPPPPRGHGGVGGPPTPPGAPAPPMPPGVPGGPPP 1219
Query: 672 PPPXXG 689
PP G
Sbjct: 1220 PPGGRG 1225
Score = 28.7 bits (61), Expect = 6.5
Identities = 22/67 (32%), Positives = 22/67 (32%), Gaps = 1/67 (1%)
Frame = +3
Query: 492 PPPXXKKXFFFXXXPPPXGG-GGXXKKXFFFXXXGGGGXXXXXXXXXKPPPXXXXXXXPP 668
PPP PPP GG GG G GG PPP PP
Sbjct: 1110 PPPPPPGGITGVPPPPPIGGLGGHQAPPAPPLPEGIGGVP--------PPPPVGGLGGPP 1161
Query: 669 PPPPXXG 689
PPP G
Sbjct: 1162 APPPPAG 1168
Score = 28.7 bits (61), Expect = 6.5
Identities = 19/54 (35%), Positives = 19/54 (35%), Gaps = 1/54 (1%)
Frame = -2
Query: 689 PPXXGGGGGXXXXXPRG-GGFXXXXXXXXXPPPPXXXKKKXFFXXPPPPXGGGG 531
PP GG PRG GG P PP PPPP GG G
Sbjct: 1175 PPNAHGGVAPPPPPPRGHGGVGGPPTPPGAPAPPMPPGVPG---GPPPPPGGRG 1225
Score = 28.3 bits (60), Expect = 8.6
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +3
Query: 633 PPPXXXXXXXPPPPPPXXG 689
PPP PPPPPP G
Sbjct: 1099 PPPPSIGAGAPPPPPPPGG 1117
>12_01_0033 -
272848-272943,274026-274169,274264-274375,274521-274702,
274781-274912,275038-276330,279841-280545,280649-280695,
280787-280865
Length = 929
Score = 28.3 bits (60), Expect = 8.6
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +3
Query: 633 PPPXXXXXXXPPPPPPXXG 689
PPP PPPPPP G
Sbjct: 626 PPPPPGKPGGPPPPPPRPG 644
>11_01_0035 -
256087-256185,256287-256430,256521-256632,256777-256958,
257038-257169,257297-258589,259133-259837,260465-260549,
260604-260650,260810-260900,261838-262101,262195-262309,
262455-262570,262713-262847,262969-263036,263292-263411
Length = 1235
Score = 28.3 bits (60), Expect = 8.6
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +3
Query: 633 PPPXXXXXXXPPPPPPXXG 689
PPP PPPPPP G
Sbjct: 931 PPPPPGKPGGPPPPPPPPG 949
>09_06_0125 - 21011757-21012428
Length = 223
Score = 28.3 bits (60), Expect = 8.6
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +1
Query: 634 PPPRGXXXXXPPPPPXXGG 690
PPPR PPPPP G
Sbjct: 174 PPPRAPFLAPPPPPPVGSG 192
>07_03_1573 +
27829967-27830338,27830821-27831510,27831594-27831781,
27832286-27832318,27832364-27832605,27833178-27833320,
27833649-27833825,27834104-27834256,27834639-27834694,
27834998-27835157,27835301-27835348
Length = 753
Score = 28.3 bits (60), Expect = 8.6
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +3
Query: 633 PPPXXXXXXXPPPPPPXXG 689
PPP PPPPPP G
Sbjct: 36 PPPPPPRRRTPPPPPPGSG 54
>06_03_1191 +
28286685-28287008,28287149-28287211,28287377-28287461,
28287561-28287623,28287954-28288029,28288190-28288223,
28289553-28289659,28289738-28289807,28289852-28289950
Length = 306
Score = 28.3 bits (60), Expect = 8.6
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +3
Query: 633 PPPXXXXXXXPPPPPPXXG 689
PPP PPPPPP G
Sbjct: 10 PPPHSSYAAPPPPPPPPPG 28
>01_01_1130 +
8959909-8960396,8960588-8960638,8960736-8960827,
8960964-8961054,8961877-8961937,8962172-8962216,
8962318-8962391,8962565-8962637,8963288-8963345,
8963398-8963468,8963801-8963837,8964040-8964128,
8964207-8964263,8964366-8964449,8964529-8964627,
8964765-8964869,8965145-8965216,8965308-8965497,
8965810-8966207
Length = 744
Score = 28.3 bits (60), Expect = 8.6
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +3
Query: 633 PPPXXXXXXXPPPPPPXXG 689
PPP PPPPPP G
Sbjct: 75 PPPTPPSPPPPPPPPPTNG 93
>01_01_0672 +
5147916-5147976,5148087-5148166,5148329-5148973,
5149111-5149341
Length = 338
Score = 23.8 bits (49), Expect(2) = 9.9
Identities = 8/17 (47%), Positives = 9/17 (52%)
Frame = +3
Query: 630 KPPPXXXXXXXPPPPPP 680
+P P PPPPPP
Sbjct: 144 EPQPGRYTAGLPPPPPP 160
Score = 22.6 bits (46), Expect(2) = 9.9
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +3
Query: 663 PPPPPPXXG 689
PPPPPP G
Sbjct: 156 PPPPPPVTG 164
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,923,286
Number of Sequences: 37544
Number of extensions: 511488
Number of successful extensions: 6075
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1993
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4613
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2479731924
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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