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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP11_T7_G04
         (879 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U21123-1|AAA85120.1|  684|Drosophila melanogaster ena polypeptid...    36   0.056
BT004488-1|AAO42652.1|  687|Drosophila melanogaster LD23655p pro...    36   0.056
AY084210-1|AAL89948.1|  831|Drosophila melanogaster SD08336p pro...    36   0.056
AE013599-2829|AAM68439.1|  829|Drosophila melanogaster CG15112-P...    36   0.056
AE013599-2828|AAX52697.1|  684|Drosophila melanogaster CG15112-P...    36   0.056
AE013599-2827|AAM68438.2|  684|Drosophila melanogaster CG15112-P...    36   0.056
AE013599-2826|AAF57598.2|  684|Drosophila melanogaster CG15112-P...    36   0.056
AE013599-2825|AAX52696.1|  687|Drosophila melanogaster CG15112-P...    36   0.056
U11288-1|AAA67715.1| 1091|Drosophila melanogaster diaphanous pro...    35   0.17 
BT021398-1|AAX33546.1| 1091|Drosophila melanogaster LD14246p pro...    35   0.17 
AE014134-3281|AAN11087.1| 1091|Drosophila melanogaster CG1768-PB...    35   0.17 
AE014134-3280|AAF53922.1| 1091|Drosophila melanogaster CG1768-PA...    35   0.17 
AY089614-1|AAL90352.1|  417|Drosophila melanogaster RE28792p pro...    32   1.2  
AY060989-1|AAL28537.1|  222|Drosophila melanogaster GM14833p pro...    32   1.2  
AE014297-2366|AAF55430.3|  787|Drosophila melanogaster CG5836-PA...    32   1.2  
AE014296-856|AAN11603.1|  440|Drosophila melanogaster CG32241-PA...    27   2.7  
AE013599-1228|AAF58703.1|  120|Drosophila melanogaster CG13227-P...    31   2.8  
AY094937-1|AAM11290.1|  394|Drosophila melanogaster RH54416p pro...    30   4.8  
AE014298-3099|AAN09667.1|  388|Drosophila melanogaster CG32521-P...    30   4.8  
AE014298-3098|AAF50844.2|  388|Drosophila melanogaster CG32521-P...    30   4.8  
AY069683-1|AAL39828.1|  993|Drosophila melanogaster LD45449p pro...    29   6.4  
AE014298-2035|AAF48374.1|  993|Drosophila melanogaster CG9411-PA...    29   6.4  
U02042-1|AAA19249.1|  606|Drosophila melanogaster GABA receptor ...    29   8.5  
M69057-3|AAA28558.1|  595|Drosophila melanogaster GABA-alpha rec...    29   8.5  
M69057-2|AAA28557.1|  601|Drosophila melanogaster GABA-alpha rec...    29   8.5  
M69057-1|AAA28556.1|  606|Drosophila melanogaster GABA-alpha rec...    29   8.5  
AE014296-1598|AAN11989.1|  585|Drosophila melanogaster CG10537-P...    29   8.5  
AE014296-1597|AAF50311.1|  606|Drosophila melanogaster CG10537-P...    29   8.5  
AE014296-1596|AAN11988.1|  606|Drosophila melanogaster CG10537-P...    29   8.5  

>U21123-1|AAA85120.1|  684|Drosophila melanogaster ena polypeptide
           protein.
          Length = 684

 Score = 36.3 bits (80), Expect = 0.056
 Identities = 23/66 (34%), Positives = 23/66 (34%)
 Frame = +3

Query: 492 PPPXXKKXFFFXXXPPPXGGGGXXKKXFFFXXXGGGGXXXXXXXXXKPPPXXXXXXXPPP 671
           PPP      F    PPP  GGG           GGG           PPP       PPP
Sbjct: 424 PPPPAPPQMFNGAPPPPAMGGGPPPAPPAPPAMGGG-----------PPPAPGGPGAPPP 472

Query: 672 PPPXXG 689
           PPP  G
Sbjct: 473 PPPPPG 478


>BT004488-1|AAO42652.1|  687|Drosophila melanogaster LD23655p
           protein.
          Length = 687

 Score = 36.3 bits (80), Expect = 0.056
 Identities = 23/66 (34%), Positives = 23/66 (34%)
 Frame = +3

Query: 492 PPPXXKKXFFFXXXPPPXGGGGXXKKXFFFXXXGGGGXXXXXXXXXKPPPXXXXXXXPPP 671
           PPP      F    PPP  GGG           GGG           PPP       PPP
Sbjct: 427 PPPPAPPQMFNGAPPPPAMGGGPPPAPPAPPAMGGG-----------PPPAPGGPGAPPP 475

Query: 672 PPPXXG 689
           PPP  G
Sbjct: 476 PPPPPG 481


>AY084210-1|AAL89948.1|  831|Drosophila melanogaster SD08336p
           protein.
          Length = 831

 Score = 36.3 bits (80), Expect = 0.056
 Identities = 23/66 (34%), Positives = 23/66 (34%)
 Frame = +3

Query: 492 PPPXXKKXFFFXXXPPPXGGGGXXKKXFFFXXXGGGGXXXXXXXXXKPPPXXXXXXXPPP 671
           PPP      F    PPP  GGG           GGG           PPP       PPP
Sbjct: 570 PPPPAPPQMFNGAPPPPAMGGGPPPAPPAPPAMGGG-----------PPPAPGGPGAPPP 618

Query: 672 PPPXXG 689
           PPP  G
Sbjct: 619 PPPPPG 624


>AE013599-2829|AAM68439.1|  829|Drosophila melanogaster CG15112-PB,
           isoform B protein.
          Length = 829

 Score = 36.3 bits (80), Expect = 0.056
 Identities = 23/66 (34%), Positives = 23/66 (34%)
 Frame = +3

Query: 492 PPPXXKKXFFFXXXPPPXGGGGXXKKXFFFXXXGGGGXXXXXXXXXKPPPXXXXXXXPPP 671
           PPP      F    PPP  GGG           GGG           PPP       PPP
Sbjct: 569 PPPPAPPQMFNGAPPPPAMGGGPPPAPPAPPAMGGG-----------PPPAPGGPGAPPP 617

Query: 672 PPPXXG 689
           PPP  G
Sbjct: 618 PPPPPG 623


>AE013599-2828|AAX52697.1|  684|Drosophila melanogaster CG15112-PE,
           isoform E protein.
          Length = 684

 Score = 36.3 bits (80), Expect = 0.056
 Identities = 23/66 (34%), Positives = 23/66 (34%)
 Frame = +3

Query: 492 PPPXXKKXFFFXXXPPPXGGGGXXKKXFFFXXXGGGGXXXXXXXXXKPPPXXXXXXXPPP 671
           PPP      F    PPP  GGG           GGG           PPP       PPP
Sbjct: 424 PPPPAPPQMFNGAPPPPAMGGGPPPAPPAPPAMGGG-----------PPPAPGGPGAPPP 472

Query: 672 PPPXXG 689
           PPP  G
Sbjct: 473 PPPPPG 478


>AE013599-2827|AAM68438.2|  684|Drosophila melanogaster CG15112-PC,
           isoform C protein.
          Length = 684

 Score = 36.3 bits (80), Expect = 0.056
 Identities = 23/66 (34%), Positives = 23/66 (34%)
 Frame = +3

Query: 492 PPPXXKKXFFFXXXPPPXGGGGXXKKXFFFXXXGGGGXXXXXXXXXKPPPXXXXXXXPPP 671
           PPP      F    PPP  GGG           GGG           PPP       PPP
Sbjct: 424 PPPPAPPQMFNGAPPPPAMGGGPPPAPPAPPAMGGG-----------PPPAPGGPGAPPP 472

Query: 672 PPPXXG 689
           PPP  G
Sbjct: 473 PPPPPG 478


>AE013599-2826|AAF57598.2|  684|Drosophila melanogaster CG15112-PA,
           isoform A protein.
          Length = 684

 Score = 36.3 bits (80), Expect = 0.056
 Identities = 23/66 (34%), Positives = 23/66 (34%)
 Frame = +3

Query: 492 PPPXXKKXFFFXXXPPPXGGGGXXKKXFFFXXXGGGGXXXXXXXXXKPPPXXXXXXXPPP 671
           PPP      F    PPP  GGG           GGG           PPP       PPP
Sbjct: 424 PPPPAPPQMFNGAPPPPAMGGGPPPAPPAPPAMGGG-----------PPPAPGGPGAPPP 472

Query: 672 PPPXXG 689
           PPP  G
Sbjct: 473 PPPPPG 478


>AE013599-2825|AAX52696.1|  687|Drosophila melanogaster CG15112-PD,
           isoform D protein.
          Length = 687

 Score = 36.3 bits (80), Expect = 0.056
 Identities = 23/66 (34%), Positives = 23/66 (34%)
 Frame = +3

Query: 492 PPPXXKKXFFFXXXPPPXGGGGXXKKXFFFXXXGGGGXXXXXXXXXKPPPXXXXXXXPPP 671
           PPP      F    PPP  GGG           GGG           PPP       PPP
Sbjct: 427 PPPPAPPQMFNGAPPPPAMGGGPPPAPPAPPAMGGG-----------PPPAPGGPGAPPP 475

Query: 672 PPPXXG 689
           PPP  G
Sbjct: 476 PPPPPG 481


>U11288-1|AAA67715.1| 1091|Drosophila melanogaster diaphanous
           protein protein.
          Length = 1091

 Score = 34.7 bits (76), Expect = 0.17
 Identities = 19/52 (36%), Positives = 19/52 (36%)
 Frame = +3

Query: 534 PPPXGGGGXXKKXFFFXXXGGGGXXXXXXXXXKPPPXXXXXXXPPPPPPXXG 689
           PPP GGG             GGG          PPP       PPPPPP  G
Sbjct: 516 PPPGGGGAPPPPPPPMPGRAGGGPPPPP-----PPPMPGRAGGPPPPPPPPG 562



 Score = 33.1 bits (72), Expect = 0.52
 Identities = 19/53 (35%), Positives = 20/53 (37%)
 Frame = -2

Query: 689 PPXXGGGGGXXXXXPRGGGFXXXXXXXXXPPPPXXXKKKXFFXXPPPPXGGGG 531
           PP  GGGG      P   G          PPPP    +      PPPP G GG
Sbjct: 515 PPPPGGGGAPPPPPPPMPG--RAGGGPPPPPPPPMPGRAGGPPPPPPPPGMGG 565


>BT021398-1|AAX33546.1| 1091|Drosophila melanogaster LD14246p
           protein.
          Length = 1091

 Score = 34.7 bits (76), Expect = 0.17
 Identities = 19/52 (36%), Positives = 19/52 (36%)
 Frame = +3

Query: 534 PPPXGGGGXXKKXFFFXXXGGGGXXXXXXXXXKPPPXXXXXXXPPPPPPXXG 689
           PPP GGG             GGG          PPP       PPPPPP  G
Sbjct: 516 PPPGGGGAPPPPPPPMPGRAGGGPPPPP-----PPPMPGRAGGPPPPPPPPG 562



 Score = 33.1 bits (72), Expect = 0.52
 Identities = 19/53 (35%), Positives = 20/53 (37%)
 Frame = -2

Query: 689 PPXXGGGGGXXXXXPRGGGFXXXXXXXXXPPPPXXXKKKXFFXXPPPPXGGGG 531
           PP  GGGG      P   G          PPPP    +      PPPP G GG
Sbjct: 515 PPPPGGGGAPPPPPPPMPG--RAGGGPPPPPPPPMPGRAGGPPPPPPPPGMGG 565


>AE014134-3281|AAN11087.1| 1091|Drosophila melanogaster CG1768-PB,
           isoform B protein.
          Length = 1091

 Score = 34.7 bits (76), Expect = 0.17
 Identities = 19/52 (36%), Positives = 19/52 (36%)
 Frame = +3

Query: 534 PPPXGGGGXXKKXFFFXXXGGGGXXXXXXXXXKPPPXXXXXXXPPPPPPXXG 689
           PPP GGG             GGG          PPP       PPPPPP  G
Sbjct: 516 PPPGGGGAPPPPPPPMPGRAGGGPPPPP-----PPPMPGRAGGPPPPPPPPG 562



 Score = 33.1 bits (72), Expect = 0.52
 Identities = 19/53 (35%), Positives = 20/53 (37%)
 Frame = -2

Query: 689 PPXXGGGGGXXXXXPRGGGFXXXXXXXXXPPPPXXXKKKXFFXXPPPPXGGGG 531
           PP  GGGG      P   G          PPPP    +      PPPP G GG
Sbjct: 515 PPPPGGGGAPPPPPPPMPG--RAGGGPPPPPPPPMPGRAGGPPPPPPPPGMGG 565


>AE014134-3280|AAF53922.1| 1091|Drosophila melanogaster CG1768-PA,
           isoform A protein.
          Length = 1091

 Score = 34.7 bits (76), Expect = 0.17
 Identities = 19/52 (36%), Positives = 19/52 (36%)
 Frame = +3

Query: 534 PPPXGGGGXXKKXFFFXXXGGGGXXXXXXXXXKPPPXXXXXXXPPPPPPXXG 689
           PPP GGG             GGG          PPP       PPPPPP  G
Sbjct: 516 PPPGGGGAPPPPPPPMPGRAGGGPPPPP-----PPPMPGRAGGPPPPPPPPG 562



 Score = 33.1 bits (72), Expect = 0.52
 Identities = 19/53 (35%), Positives = 20/53 (37%)
 Frame = -2

Query: 689 PPXXGGGGGXXXXXPRGGGFXXXXXXXXXPPPPXXXKKKXFFXXPPPPXGGGG 531
           PP  GGGG      P   G          PPPP    +      PPPP G GG
Sbjct: 515 PPPPGGGGAPPPPPPPMPG--RAGGGPPPPPPPPMPGRAGGPPPPPPPPGMGG 565


>AY089614-1|AAL90352.1|  417|Drosophila melanogaster RE28792p
           protein.
          Length = 417

 Score = 31.9 bits (69), Expect = 1.2
 Identities = 17/48 (35%), Positives = 18/48 (37%)
 Frame = +3

Query: 537 PPXGGGGXXKKXFFFXXXGGGGXXXXXXXXXKPPPXXXXXXXPPPPPP 680
           PP GGG        +   GGG           PPP       PPPPPP
Sbjct: 375 PPWGGGA-------YSGWGGGYAPPPPPPCAPPPPALSLSQPPPPPPP 415


>AY060989-1|AAL28537.1|  222|Drosophila melanogaster GM14833p
           protein.
          Length = 222

 Score = 31.9 bits (69), Expect = 1.2
 Identities = 17/48 (35%), Positives = 18/48 (37%)
 Frame = +3

Query: 537 PPXGGGGXXKKXFFFXXXGGGGXXXXXXXXXKPPPXXXXXXXPPPPPP 680
           PP GGG        +   GGG           PPP       PPPPPP
Sbjct: 180 PPWGGGA-------YSGWGGGYAPPPPPPCAPPPPALSLSQPPPPPPP 220


>AE014297-2366|AAF55430.3|  787|Drosophila melanogaster CG5836-PA
           protein.
          Length = 787

 Score = 31.9 bits (69), Expect = 1.2
 Identities = 17/48 (35%), Positives = 18/48 (37%)
 Frame = +3

Query: 537 PPXGGGGXXKKXFFFXXXGGGGXXXXXXXXXKPPPXXXXXXXPPPPPP 680
           PP GGG        +   GGG           PPP       PPPPPP
Sbjct: 745 PPWGGGA-------YSGWGGGYAPPPPPPCAPPPPALSLSQPPPPPPP 785


>AE014296-856|AAN11603.1|  440|Drosophila melanogaster CG32241-PA
           protein.
          Length = 440

 Score = 26.6 bits (56), Expect(2) = 2.7
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = +3

Query: 633 PPPXXXXXXXPPPPPP 680
           PPP       PPPPPP
Sbjct: 296 PPPTKKVVYTPPPPPP 311



 Score = 22.6 bits (46), Expect(2) = 2.7
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +3

Query: 492 PPPXXKKXFFFXXXPPP 542
           PPP  KK  +    PPP
Sbjct: 282 PPPPTKKVVYTPPPPPP 298


>AE013599-1228|AAF58703.1|  120|Drosophila melanogaster CG13227-PA
           protein.
          Length = 120

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 12/23 (52%), Positives = 12/23 (52%)
 Frame = -2

Query: 599 PPPXXXKKKXFFXXPPPPXGGGG 531
           PPP       FF  PPPP  GGG
Sbjct: 65  PPPFGPPPPPFFGPPPPPYYGGG 87


>AY094937-1|AAM11290.1|  394|Drosophila melanogaster RH54416p
           protein.
          Length = 394

 Score = 29.9 bits (64), Expect = 4.8
 Identities = 17/57 (29%), Positives = 21/57 (36%), Gaps = 3/57 (5%)
 Frame = -2

Query: 677 GGGGGXXXXXPRGGGFXXXXXXXXXPPPPXXXKKKXFFXXPPP---PXGGGGXXKKK 516
           GG GG     P  GG+         P  P   + +  +  P P     GGGG  K K
Sbjct: 165 GGNGGYGGYNPYNGGYQPPSSGGYQPQAPGGYQPRPGYTPPAPGYDNNGGGGAQKPK 221


>AE014298-3099|AAN09667.1|  388|Drosophila melanogaster CG32521-PB,
           isoform B protein.
          Length = 388

 Score = 29.9 bits (64), Expect = 4.8
 Identities = 17/57 (29%), Positives = 21/57 (36%), Gaps = 3/57 (5%)
 Frame = -2

Query: 677 GGGGGXXXXXPRGGGFXXXXXXXXXPPPPXXXKKKXFFXXPPP---PXGGGGXXKKK 516
           GG GG     P  GG+         P  P   + +  +  P P     GGGG  K K
Sbjct: 165 GGNGGYGGYNPYNGGYQPPSSGGYQPQAPGGYQPRPGYTPPAPGYDNNGGGGAQKPK 221


>AE014298-3098|AAF50844.2|  388|Drosophila melanogaster CG32521-PA,
           isoform A protein.
          Length = 388

 Score = 29.9 bits (64), Expect = 4.8
 Identities = 17/57 (29%), Positives = 21/57 (36%), Gaps = 3/57 (5%)
 Frame = -2

Query: 677 GGGGGXXXXXPRGGGFXXXXXXXXXPPPPXXXKKKXFFXXPPP---PXGGGGXXKKK 516
           GG GG     P  GG+         P  P   + +  +  P P     GGGG  K K
Sbjct: 165 GGNGGYGGYNPYNGGYQPPSSGGYQPQAPGGYQPRPGYTPPAPGYDNNGGGGAQKPK 221


>AY069683-1|AAL39828.1|  993|Drosophila melanogaster LD45449p
           protein.
          Length = 993

 Score = 29.5 bits (63), Expect = 6.4
 Identities = 18/62 (29%), Positives = 19/62 (30%)
 Frame = +3

Query: 492 PPPXXKKXFFFXXXPPPXGGGGXXKKXFFFXXXGGGGXXXXXXXXXKPPPXXXXXXXPPP 671
           PPP      +    PPP G  G           G  G          PPP       PPP
Sbjct: 435 PPPPPPSGNYGPPPPPPSGNYGPPPPP----PSGNYGPPPPPSGNYGPPPPPSGNYGPPP 490

Query: 672 PP 677
           PP
Sbjct: 491 PP 492


>AE014298-2035|AAF48374.1|  993|Drosophila melanogaster CG9411-PA
           protein.
          Length = 993

 Score = 29.5 bits (63), Expect = 6.4
 Identities = 18/62 (29%), Positives = 19/62 (30%)
 Frame = +3

Query: 492 PPPXXKKXFFFXXXPPPXGGGGXXKKXFFFXXXGGGGXXXXXXXXXKPPPXXXXXXXPPP 671
           PPP      +    PPP G  G           G  G          PPP       PPP
Sbjct: 435 PPPPPPSGNYGPPPPPPSGNYGPPPPP----PSGNYGPPPPPSGNYGPPPPPSGNYGPPP 490

Query: 672 PP 677
           PP
Sbjct: 491 PP 492


>U02042-1|AAA19249.1|  606|Drosophila melanogaster GABA receptor
           protein.
          Length = 606

 Score = 29.1 bits (62), Expect = 8.5
 Identities = 11/19 (57%), Positives = 11/19 (57%)
 Frame = -2

Query: 689 PPXXGGGGGXXXXXPRGGG 633
           PP  GGGGG     P GGG
Sbjct: 517 PPGGGGGGGGGGGPPEGGG 535


>M69057-3|AAA28558.1|  595|Drosophila melanogaster GABA-alpha
           receptor protein.
          Length = 595

 Score = 29.1 bits (62), Expect = 8.5
 Identities = 11/19 (57%), Positives = 11/19 (57%)
 Frame = -2

Query: 689 PPXXGGGGGXXXXXPRGGG 633
           PP  GGGGG     P GGG
Sbjct: 506 PPGGGGGGGGGGGPPEGGG 524


>M69057-2|AAA28557.1|  601|Drosophila melanogaster GABA-alpha
           receptor protein.
          Length = 601

 Score = 29.1 bits (62), Expect = 8.5
 Identities = 11/19 (57%), Positives = 11/19 (57%)
 Frame = -2

Query: 689 PPXXGGGGGXXXXXPRGGG 633
           PP  GGGGG     P GGG
Sbjct: 512 PPGGGGGGGGGGGPPEGGG 530


>M69057-1|AAA28556.1|  606|Drosophila melanogaster GABA-alpha
           receptor protein.
          Length = 606

 Score = 29.1 bits (62), Expect = 8.5
 Identities = 11/19 (57%), Positives = 11/19 (57%)
 Frame = -2

Query: 689 PPXXGGGGGXXXXXPRGGG 633
           PP  GGGGG     P GGG
Sbjct: 517 PPGGGGGGGGGGGPPEGGG 535


>AE014296-1598|AAN11989.1|  585|Drosophila melanogaster CG10537-PB,
           isoform B protein.
          Length = 585

 Score = 29.1 bits (62), Expect = 8.5
 Identities = 11/19 (57%), Positives = 11/19 (57%)
 Frame = -2

Query: 689 PPXXGGGGGXXXXXPRGGG 633
           PP  GGGGG     P GGG
Sbjct: 496 PPGGGGGGGGGGGPPEGGG 514


>AE014296-1597|AAF50311.1|  606|Drosophila melanogaster CG10537-PA,
           isoform A protein.
          Length = 606

 Score = 29.1 bits (62), Expect = 8.5
 Identities = 11/19 (57%), Positives = 11/19 (57%)
 Frame = -2

Query: 689 PPXXGGGGGXXXXXPRGGG 633
           PP  GGGGG     P GGG
Sbjct: 517 PPGGGGGGGGGGGPPEGGG 535


>AE014296-1596|AAN11988.1|  606|Drosophila melanogaster CG10537-PC,
           isoform C protein.
          Length = 606

 Score = 29.1 bits (62), Expect = 8.5
 Identities = 11/19 (57%), Positives = 11/19 (57%)
 Frame = -2

Query: 689 PPXXGGGGGXXXXXPRGGG 633
           PP  GGGGG     P GGG
Sbjct: 517 PPGGGGGGGGGGGPPEGGG 535


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,934,130
Number of Sequences: 53049
Number of extensions: 732970
Number of successful extensions: 6716
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1902
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4807
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4270708416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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