Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP11_T7_F22
(808 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ178242-1|ABA18181.1| 578|Caenorhabditis elegans Frizzled homo... 29 3.9
AF142441-1|AAF66614.1| 701|Caenorhabditis elegans H+/oligopepti... 29 3.9
AF016413-2|ABA54421.1| 578|Caenorhabditis elegans Caenorhabditi... 29 3.9
AF016413-1|ABA54422.1| 550|Caenorhabditis elegans Caenorhabditi... 29 3.9
AF003146-1|AAB54202.1| 701|Caenorhabditis elegans Oligopeptide ... 29 3.9
AB026113-1|BAA84678.1| 550|Caenorhabditis elegans Cfz2 protein. 29 3.9
U97002-9|AAB52261.2| 985|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z93387-2|CAB07650.1| 763|Caenorhabditis elegans Hypothetical pr... 28 9.0
>DQ178242-1|ABA18181.1| 578|Caenorhabditis elegans Frizzled homolog
protein.
Length = 578
Score = 29.1 bits (62), Expect = 3.9
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +2
Query: 74 HN-TPPGTEVVYRLFRAPTSN*VISGPSEPRCTC*EKNR*HRSPRSKWASTSRLAF 238
HN +P G EV + N VI+GPSE +CTC + + S +SK + + A+
Sbjct: 168 HNYSPDGPEVGI----SKIDNEVIAGPSECQCTCNQPFQFVASEKSKVGNVTNCAY 219
>AF142441-1|AAF66614.1| 701|Caenorhabditis elegans H+/oligopeptide
symporter OPT-3 protein.
Length = 701
Score = 29.1 bits (62), Expect = 3.9
Identities = 24/102 (23%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Frame = +3
Query: 15 FSPGAG-LSLNRSQHDAALPSITPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKKTDS 191
F P G + L R +++ + + + + D P+ RTEL + + + +K ++
Sbjct: 377 FPPSLGRIYLQRVGNESLISDFRYKSDGRLIGDGMLPKGRTELDAGIYTFNTGLKNESQE 436
Query: 192 IDLRDPN-GLRRRVSRFECETRLVK-SHCLEPPDSRGSTVSI 311
ID+ PN G V R + +VK + +E D+ + V +
Sbjct: 437 IDISTPNKGYVMAVFRLKDAVEVVKFDYKVEKTDNGATRVFV 478
>AF016413-2|ABA54421.1| 578|Caenorhabditis elegans Caenorhabditis
frizzled homologprotein 2, isoform a protein.
Length = 578
Score = 29.1 bits (62), Expect = 3.9
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +2
Query: 74 HN-TPPGTEVVYRLFRAPTSN*VISGPSEPRCTC*EKNR*HRSPRSKWASTSRLAF 238
HN +P G EV + N VI+GPSE +CTC + + S +SK + + A+
Sbjct: 168 HNYSPDGPEVGI----SKIDNEVIAGPSECQCTCNQPFQFVASEKSKVGNVTNCAY 219
>AF016413-1|ABA54422.1| 550|Caenorhabditis elegans Caenorhabditis
frizzled homologprotein 2, isoform b protein.
Length = 550
Score = 29.1 bits (62), Expect = 3.9
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +2
Query: 74 HN-TPPGTEVVYRLFRAPTSN*VISGPSEPRCTC*EKNR*HRSPRSKWASTSRLAF 238
HN +P G EV + N VI+GPSE +CTC + + S +SK + + A+
Sbjct: 168 HNYSPDGPEVGI----SKIDNEVIAGPSECQCTCNQPFQFVASEKSKVGNVTNCAY 219
>AF003146-1|AAB54202.1| 701|Caenorhabditis elegans Oligopeptide
transporter protein 3 protein.
Length = 701
Score = 29.1 bits (62), Expect = 3.9
Identities = 24/102 (23%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Frame = +3
Query: 15 FSPGAG-LSLNRSQHDAALPSITPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKKTDS 191
F P G + L R +++ + + + + D P+ RTEL + + + +K ++
Sbjct: 377 FPPSLGRIYLQRVGNESLISDFRYKSDGRLIGDGMLPKGRTELDAGIYTFNTGLKNESQE 436
Query: 192 IDLRDPN-GLRRRVSRFECETRLVK-SHCLEPPDSRGSTVSI 311
ID+ PN G V R + +VK + +E D+ + V +
Sbjct: 437 IDISTPNKGYVMAVFRLKDAVEVVKFDYKVEKTDNGATRVFV 478
>AB026113-1|BAA84678.1| 550|Caenorhabditis elegans Cfz2 protein.
Length = 550
Score = 29.1 bits (62), Expect = 3.9
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +2
Query: 74 HN-TPPGTEVVYRLFRAPTSN*VISGPSEPRCTC*EKNR*HRSPRSKWASTSRLAF 238
HN +P G EV + N VI+GPSE +CTC + + S +SK + + A+
Sbjct: 168 HNYSPDGPEVGI----SKIDNEVIAGPSECQCTCNQPFQFVASEKSKVGNVTNCAY 219
>U97002-9|AAB52261.2| 985|Caenorhabditis elegans Hypothetical
protein K09H11.1 protein.
Length = 985
Score = 28.3 bits (60), Expect = 6.8
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +1
Query: 139 YIRTFGAAMHVLRKKPIASISAIQMGFDVASRVLNA 246
YIRT + +VLRKKP S+ D +++NA
Sbjct: 264 YIRTVRGSQYVLRKKPSGSLLPKAHQVDREFKIMNA 299
>Z93387-2|CAB07650.1| 763|Caenorhabditis elegans Hypothetical
protein T02E9.3 protein.
Length = 763
Score = 27.9 bits (59), Expect = 9.0
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = -1
Query: 427 FGHLVHALGRAAGGAKLPSAGLCLNASKAEASLAESGKDMLTVEPRESGGSKQCDFTSRV 248
FG L H G LP + S+ + ++++G + R+SGGSK+ +
Sbjct: 212 FGQLTHRGGERERRHSLPRVIIEEVRSRRGSRMSQTGSQSGSPTRRQSGGSKERSPSQPD 271
Query: 247 SH--SKRETRRRSP 212
H +K + R RSP
Sbjct: 272 IHIVAKPQQRWRSP 285
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,299,029
Number of Sequences: 27780
Number of extensions: 380643
Number of successful extensions: 1071
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1033
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1071
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1977346024
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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