Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP11_T7_F21
(782 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF025471-8|AAB71060.1| 1019|Caenorhabditis elegans Hypothetical ... 36 0.043
Z46242-7|CAA86336.1| 1549|Caenorhabditis elegans Hypothetical pr... 35 0.057
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 34 0.13
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 34 0.13
Z54236-5|CAA90980.1| 386|Caenorhabditis elegans Hypothetical pr... 33 0.23
AF040646-4|AAO38629.1| 395|Caenorhabditis elegans Hypothetical ... 32 0.40
AF040646-3|AAK31541.1| 946|Caenorhabditis elegans Hypothetical ... 32 0.40
Z83744-4|CAB06040.4| 735|Caenorhabditis elegans Hypothetical pr... 31 0.93
U64835-5|AAG24196.1| 592|Caenorhabditis elegans Hypothetical pr... 31 0.93
U64848-15|AAB04891.1| 384|Caenorhabditis elegans Hypothetical p... 30 1.6
AC024214-13|AAM97984.1| 296|Caenorhabditis elegans Collagen pro... 30 1.6
Z47809-8|CAH10845.1| 968|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z47809-6|CAD57700.1| 1124|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z47809-5|CAD57699.1| 1019|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z47809-4|CAA87782.1| 1016|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z36719-11|CAH04695.1| 968|Caenorhabditis elegans Hypothetical p... 30 2.1
Z36719-10|CAD57686.1| 1124|Caenorhabditis elegans Hypothetical p... 30 2.1
Z36719-9|CAD57685.1| 1019|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z36719-8|CAA85318.1| 1016|Caenorhabditis elegans Hypothetical pr... 30 2.1
U86640-1|AAB47273.1| 1016|Caenorhabditis elegans MEL-11 protein. 30 2.1
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 30 2.1
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 30 2.1
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 30 2.1
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 30 2.1
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 30 2.1
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 30 2.1
U15406-1|AAA50456.1| 2272|Caenorhabditis elegans gag, pol and en... 29 2.8
L23646-13|AAA28035.2| 2175|Caenorhabditis elegans C. elegans RET... 29 2.8
L23646-12|AAL02516.1| 2186|Caenorhabditis elegans C. elegans RET... 29 2.8
AF100656-7|AAF99964.2| 615|Caenorhabditis elegans Hypothetical ... 29 2.8
Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z93395-1|CAB07704.1| 1160|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical pr... 29 3.7
U58761-4|AAB00715.1| 631|Caenorhabditis elegans Hypothetical pr... 29 3.7
L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membra... 29 3.7
U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical pr... 28 6.6
U41278-7|AAT81193.1| 680|Caenorhabditis elegans Hypothetical pr... 28 6.6
U41278-6|AAK31510.3| 771|Caenorhabditis elegans Hypothetical pr... 28 6.6
AC006672-5|AAM98003.1| 42|Caenorhabditis elegans Hypothetical ... 28 6.6
AC006672-4|AAK84542.1| 151|Caenorhabditis elegans Hypothetical ... 28 6.6
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 28 8.7
Z71181-6|CAA94899.1| 647|Caenorhabditis elegans Hypothetical pr... 28 8.7
Z68493-3|CAA92788.1| 61|Caenorhabditis elegans Hypothetical pr... 28 8.7
U80837-3|AAB37904.2| 384|Caenorhabditis elegans Hypothetical pr... 28 8.7
>AF025471-8|AAB71060.1| 1019|Caenorhabditis elegans Hypothetical
protein R52.2 protein.
Length = 1019
Score = 35.5 bits (78), Expect = 0.043
Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Frame = -1
Query: 146 GQCYRCQLYGHSARNCHARPR-CVKCLGDHATLDCVRDRETATEKKKKK 3
G C+ C GH C +RPR C C G+H T+ C AT ++
Sbjct: 346 GLCFGCLRSGHQRSKC-SRPRTCNHCKGNHHTVFCQSHNRNATRNPNQR 393
>Z46242-7|CAA86336.1| 1549|Caenorhabditis elegans Hypothetical
protein F35G12.8 protein.
Length = 1549
Score = 35.1 bits (77), Expect = 0.057
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Frame = -1
Query: 569 NRVSQALQANKINYTHARNVAHGIQIKVATPGDHRALSAYLRKENIGFHTYA-LQEDREL 393
NR++ L +I HARN KVA RA +L KEN + L++ R
Sbjct: 281 NRLTCDLSQQRIARDHARNS------KVAMENPVRAAIEFLMKENEATTIHMKLEQRRRQ 334
Query: 392 RVVIRGVPKELEIDYIKEDLTAQA 321
R + + PK+ E+D +KE++ + A
Sbjct: 335 RYLDKIAPKQAELDKMKEEMKSIA 358
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 33.9 bits (74), Expect = 0.13
Identities = 23/67 (34%), Positives = 30/67 (44%), Gaps = 3/67 (4%)
Frame = -1
Query: 197 CGLSGISIEAPHRRGTPGQCYRCQLYGHSARNCHARPR-CVKCLGD--HATLDCVRDRET 27
CG S I +EA G C+ C+ YGH A C A R C C GD H +C +
Sbjct: 187 CGTSPI-LEAKGF-GISNTCFNCKKYGHRATECSAPQRECANC-GDPNHRANECASWSKN 243
Query: 26 ATEKKKK 6
++ K
Sbjct: 244 GVQEPTK 250
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 33.9 bits (74), Expect = 0.13
Identities = 23/67 (34%), Positives = 30/67 (44%), Gaps = 3/67 (4%)
Frame = -1
Query: 197 CGLSGISIEAPHRRGTPGQCYRCQLYGHSARNCHARPR-CVKCLGD--HATLDCVRDRET 27
CG S I +EA G C+ C+ YGH A C A R C C GD H +C +
Sbjct: 187 CGTSPI-LEAKGF-GISNTCFNCKKYGHRATECSAPQRECANC-GDPNHRANECASWSKN 243
Query: 26 ATEKKKK 6
++ K
Sbjct: 244 GVQEPTK 250
>Z54236-5|CAA90980.1| 386|Caenorhabditis elegans Hypothetical
protein C27B7.5 protein.
Length = 386
Score = 33.1 bits (72), Expect = 0.23
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -1
Query: 158 RGTPGQCYRCQLYGHSARNC 99
RG PG C+ CQ +GH +R C
Sbjct: 164 RGGPGHCFHCQEHGHISRMC 183
>AF040646-4|AAO38629.1| 395|Caenorhabditis elegans Hypothetical
protein H17B01.4b protein.
Length = 395
Score = 32.3 bits (70), Expect = 0.40
Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
Frame = -1
Query: 557 QALQANKINYTHAR-NVAHGIQIKVATPGDHRALSAYLRKENIGFHTYALQEDRELRV-V 384
Q + I+ T+ R +VA G + V GD + + + K + F + Q+D + V
Sbjct: 124 QKSEIQAIHVTNQRLHVASGRTLVVFRLGDEKPVETVISKTELTFSAFFQQDDVVIHVSA 183
Query: 383 IRGVPKELEIDYIKEDLTAQALPIVSV 303
++ K +E+ I ED + L V +
Sbjct: 184 LKNAGKSIELSKITEDGAFEPLKTVEI 210
>AF040646-3|AAK31541.1| 946|Caenorhabditis elegans Hypothetical
protein H17B01.4a protein.
Length = 946
Score = 32.3 bits (70), Expect = 0.40
Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
Frame = -1
Query: 557 QALQANKINYTHAR-NVAHGIQIKVATPGDHRALSAYLRKENIGFHTYALQEDRELRV-V 384
Q + I+ T+ R +VA G + V GD + + + K + F + Q+D + V
Sbjct: 124 QKSEIQAIHVTNQRLHVASGRTLVVFRLGDEKPVETVISKTELTFSAFFQQDDVVIHVSA 183
Query: 383 IRGVPKELEIDYIKEDLTAQALPIVSV 303
++ K +E+ I ED + L V +
Sbjct: 184 LKNAGKSIELSKITEDGAFEPLKTVEI 210
>Z83744-4|CAB06040.4| 735|Caenorhabditis elegans Hypothetical
protein C06A12.4 protein.
Length = 735
Score = 31.1 bits (67), Expect = 0.93
Identities = 18/58 (31%), Positives = 29/58 (50%)
Frame = +3
Query: 372 DSAYYYAELAVLLKSIGVETYVLLSEVC*EGPMVARRCDLDLNPMRDVTRMGVVNFIC 545
D + A + +LK + Y+ LS V G + A C +D+N + + GV NF+C
Sbjct: 278 DETFKSAFMRDILKGL---QYLHLSPVAYHGHLHAATCLIDINWVLKIALYGVTNFVC 332
>U64835-5|AAG24196.1| 592|Caenorhabditis elegans Hypothetical
protein T09D3.3 protein.
Length = 592
Score = 31.1 bits (67), Expect = 0.93
Identities = 21/58 (36%), Positives = 25/58 (43%)
Frame = -1
Query: 254 VALEPTPEAKKKIACLTTICGLSGISIEAPHRRGTPGQCYRCQLYGHSARNCHARPRC 81
V LEPT E KIA + G+ IE PHR +P + L H A P C
Sbjct: 228 VVLEPTKEEVMKIASKKNLYGMPRFPIE-PHR--SPSPPHPLVLVVHPAPQAQCSPAC 282
>U64848-15|AAB04891.1| 384|Caenorhabditis elegans Hypothetical
protein C50E3.13 protein.
Length = 384
Score = 30.3 bits (65), Expect = 1.6
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = -1
Query: 461 LSAYLRKENIGFHTYALQEDRELRVVIRGVPKELEIDYIKEDLTAQALPIVSVHRMHSGR 282
L A N G + QE + V+ GVP+ + + EDLTA+ PI S
Sbjct: 7 LEAGASDSNAGGSSRQGQEQERVEPVLEGVPQPNDQESADEDLTARQPPIQPQVPNASDN 66
Query: 281 GKQPYNM-ILVALEPT 237
+ P N+ L+A+ P+
Sbjct: 67 LQVPPNLEYLIAVNPS 82
>AC024214-13|AAM97984.1| 296|Caenorhabditis elegans Collagen
protein 106 protein.
Length = 296
Score = 30.3 bits (65), Expect = 1.6
Identities = 21/62 (33%), Positives = 25/62 (40%), Gaps = 2/62 (3%)
Frame = -3
Query: 495 DQGRNA--GRP*GPLSIPPKGEHRFPHLCSSGGPRAPRSNTRSP*GARNRLH*GGSDRSG 322
+ G+N G P GP P+G P GP + T P A H G S R G
Sbjct: 163 EDGQNGAPGSPGGPGETGPQGHQGKPGRAGPRGPPGAKGQTYLPGSAG---HPGNSGRRG 219
Query: 321 PP 316
PP
Sbjct: 220 PP 221
>Z47809-8|CAH10845.1| 968|Caenorhabditis elegans Hypothetical
protein C06C3.1d protein.
Length = 968
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = -3
Query: 495 DQGRNAGRP*GPLSIPPKGEHRFP-HLCSSGGPRAPRSNTRS 373
DQ +A P PLS PPK H+ P + G P + RS+T S
Sbjct: 533 DQNVSATIPIVPLSAPPKAVHQSPSSWINRGVPLSSRSSTSS 574
>Z47809-6|CAD57700.1| 1124|Caenorhabditis elegans Hypothetical
protein C06C3.1c protein.
Length = 1124
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = -3
Query: 495 DQGRNAGRP*GPLSIPPKGEHRFP-HLCSSGGPRAPRSNTRS 373
DQ +A P PLS PPK H+ P + G P + RS+T S
Sbjct: 533 DQNVSATIPIVPLSAPPKAVHQSPSSWINRGVPLSSRSSTSS 574
>Z47809-5|CAD57699.1| 1019|Caenorhabditis elegans Hypothetical
protein C06C3.1b protein.
Length = 1019
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = -3
Query: 495 DQGRNAGRP*GPLSIPPKGEHRFP-HLCSSGGPRAPRSNTRS 373
DQ +A P PLS PPK H+ P + G P + RS+T S
Sbjct: 536 DQNVSATIPIVPLSAPPKAVHQSPSSWINRGVPLSSRSSTSS 577
>Z47809-4|CAA87782.1| 1016|Caenorhabditis elegans Hypothetical
protein C06C3.1a protein.
Length = 1016
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = -3
Query: 495 DQGRNAGRP*GPLSIPPKGEHRFP-HLCSSGGPRAPRSNTRS 373
DQ +A P PLS PPK H+ P + G P + RS+T S
Sbjct: 533 DQNVSATIPIVPLSAPPKAVHQSPSSWINRGVPLSSRSSTSS 574
>Z36719-11|CAH04695.1| 968|Caenorhabditis elegans Hypothetical
protein C06C3.1d protein.
Length = 968
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = -3
Query: 495 DQGRNAGRP*GPLSIPPKGEHRFP-HLCSSGGPRAPRSNTRS 373
DQ +A P PLS PPK H+ P + G P + RS+T S
Sbjct: 533 DQNVSATIPIVPLSAPPKAVHQSPSSWINRGVPLSSRSSTSS 574
>Z36719-10|CAD57686.1| 1124|Caenorhabditis elegans Hypothetical
protein C06C3.1c protein.
Length = 1124
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = -3
Query: 495 DQGRNAGRP*GPLSIPPKGEHRFP-HLCSSGGPRAPRSNTRS 373
DQ +A P PLS PPK H+ P + G P + RS+T S
Sbjct: 533 DQNVSATIPIVPLSAPPKAVHQSPSSWINRGVPLSSRSSTSS 574
>Z36719-9|CAD57685.1| 1019|Caenorhabditis elegans Hypothetical
protein C06C3.1b protein.
Length = 1019
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = -3
Query: 495 DQGRNAGRP*GPLSIPPKGEHRFP-HLCSSGGPRAPRSNTRS 373
DQ +A P PLS PPK H+ P + G P + RS+T S
Sbjct: 536 DQNVSATIPIVPLSAPPKAVHQSPSSWINRGVPLSSRSSTSS 577
>Z36719-8|CAA85318.1| 1016|Caenorhabditis elegans Hypothetical
protein C06C3.1a protein.
Length = 1016
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = -3
Query: 495 DQGRNAGRP*GPLSIPPKGEHRFP-HLCSSGGPRAPRSNTRS 373
DQ +A P PLS PPK H+ P + G P + RS+T S
Sbjct: 533 DQNVSATIPIVPLSAPPKAVHQSPSSWINRGVPLSSRSSTSS 574
>U86640-1|AAB47273.1| 1016|Caenorhabditis elegans MEL-11 protein.
Length = 1016
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = -3
Query: 495 DQGRNAGRP*GPLSIPPKGEHRFP-HLCSSGGPRAPRSNTRS 373
DQ +A P PLS PPK H+ P + G P + RS+T S
Sbjct: 533 DQNVSATIPIVPLSAPPKAVHQSPSSWINRGVPLSSRSSTSS 574
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 29.9 bits (64), Expect = 2.1
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -1
Query: 167 PHRRGTPGQCYRCQLYGHSARNC 99
P + P CY CQ GH++R C
Sbjct: 176 PRKEREPRVCYNCQQPGHTSREC 198
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 29.9 bits (64), Expect = 2.1
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -1
Query: 167 PHRRGTPGQCYRCQLYGHSARNC 99
P + P CY CQ GH++R+C
Sbjct: 275 PKKEREPRVCYNCQQPGHNSRDC 297
Score = 29.9 bits (64), Expect = 2.1
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -1
Query: 167 PHRRGTPGQCYRCQLYGHSARNC 99
P + P CY CQ GH++R+C
Sbjct: 389 PKKEREPRVCYNCQQPGHNSRDC 411
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 29.9 bits (64), Expect = 2.1
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -1
Query: 167 PHRRGTPGQCYRCQLYGHSARNC 99
P + P CY CQ GH++R+C
Sbjct: 275 PKKEREPRVCYNCQQPGHNSRDC 297
Score = 29.9 bits (64), Expect = 2.1
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -1
Query: 167 PHRRGTPGQCYRCQLYGHSARNC 99
P + P CY CQ GH++R+C
Sbjct: 389 PKKEREPRVCYNCQQPGHNSRDC 411
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 29.9 bits (64), Expect = 2.1
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -1
Query: 167 PHRRGTPGQCYRCQLYGHSARNC 99
P + P CY CQ GH++R C
Sbjct: 176 PRKEREPRVCYNCQQPGHTSREC 198
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 29.9 bits (64), Expect = 2.1
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -1
Query: 167 PHRRGTPGQCYRCQLYGHSARNC 99
P + P CY CQ GH++R C
Sbjct: 176 PRKEREPRVCYNCQQPGHTSREC 198
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 29.9 bits (64), Expect = 2.1
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -1
Query: 167 PHRRGTPGQCYRCQLYGHSARNC 99
P + P CY CQ GH++R+C
Sbjct: 275 PKKEREPRVCYNCQQPGHNSRDC 297
Score = 29.9 bits (64), Expect = 2.1
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -1
Query: 167 PHRRGTPGQCYRCQLYGHSARNC 99
P + P CY CQ GH++R+C
Sbjct: 389 PKKEREPRVCYNCQQPGHNSRDC 411
>U15406-1|AAA50456.1| 2272|Caenorhabditis elegans gag, pol and env
protein precursor protein.
Length = 2272
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = -1
Query: 110 ARNCHARPRCVKCLGDHATLDCVRDRETATEKKKK 6
A CH + V+ LG TLD V +E T+K K+
Sbjct: 1214 ASKCHIAKKEVEYLGHKVTLDGVETQEVKTDKMKQ 1248
>L23646-13|AAA28035.2| 2175|Caenorhabditis elegans C. elegans RETR-1
protein, isoforma protein.
Length = 2175
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = -1
Query: 110 ARNCHARPRCVKCLGDHATLDCVRDRETATEKKKK 6
A CH + V+ LG TLD V +E T+K K+
Sbjct: 1117 ASKCHIAKKEVEYLGHKVTLDGVETQEVKTDKMKQ 1151
>L23646-12|AAL02516.1| 2186|Caenorhabditis elegans C. elegans RETR-1
protein, isoformb protein.
Length = 2186
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = -1
Query: 110 ARNCHARPRCVKCLGDHATLDCVRDRETATEKKKK 6
A CH + V+ LG TLD V +E T+K K+
Sbjct: 1128 ASKCHIAKKEVEYLGHKVTLDGVETQEVKTDKMKQ 1162
>AF100656-7|AAF99964.2| 615|Caenorhabditis elegans Hypothetical
protein F49F1.8 protein.
Length = 615
Score = 29.5 bits (63), Expect = 2.8
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -1
Query: 146 GQCYRCQLYGHSARNC 99
GQC+ C+ GH ARNC
Sbjct: 574 GQCHYCKNVGHMARNC 589
>Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical protein
ZC101.2f protein.
Length = 2389
Score = 29.1 bits (62), Expect = 3.7
Identities = 16/47 (34%), Positives = 19/47 (40%), Gaps = 6/47 (12%)
Frame = -1
Query: 161 RRGTPGQCYR------CQLYGHSARNCHARPRCVKCLGDHATLDCVR 39
RRGTP C C HS R C + RC+ C + C R
Sbjct: 995 RRGTPNDCQPEATRAPCHCNNHSPRGCDSFGRCLLCEHNTEGTHCER 1041
>Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical protein
ZC101.2e protein.
Length = 3375
Score = 29.1 bits (62), Expect = 3.7
Identities = 16/47 (34%), Positives = 19/47 (40%), Gaps = 6/47 (12%)
Frame = -1
Query: 161 RRGTPGQCYR------CQLYGHSARNCHARPRCVKCLGDHATLDCVR 39
RRGTP C C HS R C + RC+ C + C R
Sbjct: 995 RRGTPNDCQPEATRAPCHCNNHSPRGCDSFGRCLLCEHNTEGTHCER 1041
>Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical protein
ZC101.2c protein.
Length = 2295
Score = 29.1 bits (62), Expect = 3.7
Identities = 16/47 (34%), Positives = 19/47 (40%), Gaps = 6/47 (12%)
Frame = -1
Query: 161 RRGTPGQCYR------CQLYGHSARNCHARPRCVKCLGDHATLDCVR 39
RRGTP C C HS R C + RC+ C + C R
Sbjct: 995 RRGTPNDCQPEATRAPCHCNNHSPRGCDSFGRCLLCEHNTEGTHCER 1041
>Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical protein
ZC101.2a protein.
Length = 2482
Score = 29.1 bits (62), Expect = 3.7
Identities = 16/47 (34%), Positives = 19/47 (40%), Gaps = 6/47 (12%)
Frame = -1
Query: 161 RRGTPGQCYR------CQLYGHSARNCHARPRCVKCLGDHATLDCVR 39
RRGTP C C HS R C + RC+ C + C R
Sbjct: 995 RRGTPNDCQPEATRAPCHCNNHSPRGCDSFGRCLLCEHNTEGTHCER 1041
>Z93395-1|CAB07704.1| 1160|Caenorhabditis elegans Hypothetical protein
ZC101.2b protein.
Length = 1160
Score = 29.1 bits (62), Expect = 3.7
Identities = 16/47 (34%), Positives = 19/47 (40%), Gaps = 6/47 (12%)
Frame = -1
Query: 161 RRGTPGQCYR------CQLYGHSARNCHARPRCVKCLGDHATLDCVR 39
RRGTP C C HS R C + RC+ C + C R
Sbjct: 995 RRGTPNDCQPEATRAPCHCNNHSPRGCDSFGRCLLCEHNTEGTHCER 1041
>Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical protein
ZC101.2f protein.
Length = 2389
Score = 29.1 bits (62), Expect = 3.7
Identities = 16/47 (34%), Positives = 19/47 (40%), Gaps = 6/47 (12%)
Frame = -1
Query: 161 RRGTPGQCYR------CQLYGHSARNCHARPRCVKCLGDHATLDCVR 39
RRGTP C C HS R C + RC+ C + C R
Sbjct: 995 RRGTPNDCQPEATRAPCHCNNHSPRGCDSFGRCLLCEHNTEGTHCER 1041
>Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical protein
ZC101.2e protein.
Length = 3375
Score = 29.1 bits (62), Expect = 3.7
Identities = 16/47 (34%), Positives = 19/47 (40%), Gaps = 6/47 (12%)
Frame = -1
Query: 161 RRGTPGQCYR------CQLYGHSARNCHARPRCVKCLGDHATLDCVR 39
RRGTP C C HS R C + RC+ C + C R
Sbjct: 995 RRGTPNDCQPEATRAPCHCNNHSPRGCDSFGRCLLCEHNTEGTHCER 1041
>Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical protein
ZC101.2c protein.
Length = 2295
Score = 29.1 bits (62), Expect = 3.7
Identities = 16/47 (34%), Positives = 19/47 (40%), Gaps = 6/47 (12%)
Frame = -1
Query: 161 RRGTPGQCYR------CQLYGHSARNCHARPRCVKCLGDHATLDCVR 39
RRGTP C C HS R C + RC+ C + C R
Sbjct: 995 RRGTPNDCQPEATRAPCHCNNHSPRGCDSFGRCLLCEHNTEGTHCER 1041
>Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical protein
ZC101.2a protein.
Length = 2482
Score = 29.1 bits (62), Expect = 3.7
Identities = 16/47 (34%), Positives = 19/47 (40%), Gaps = 6/47 (12%)
Frame = -1
Query: 161 RRGTPGQCYR------CQLYGHSARNCHARPRCVKCLGDHATLDCVR 39
RRGTP C C HS R C + RC+ C + C R
Sbjct: 995 RRGTPNDCQPEATRAPCHCNNHSPRGCDSFGRCLLCEHNTEGTHCER 1041
>U58761-4|AAB00715.1| 631|Caenorhabditis elegans Hypothetical
protein C01F1.3a protein.
Length = 631
Score = 29.1 bits (62), Expect = 3.7
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +3
Query: 486 DLDLNPMRDVTRMGVVNFICLKGLGHAIPRCLLLKYQRGR 605
D D R++ +GV + IC+ G H P C ++Y GR
Sbjct: 371 DSDEEVERELALLGVTHVICVTGRTHG-PGCNTIEYLEGR 409
>L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membrane
proteoglycan protein.
Length = 2481
Score = 29.1 bits (62), Expect = 3.7
Identities = 16/47 (34%), Positives = 19/47 (40%), Gaps = 6/47 (12%)
Frame = -1
Query: 161 RRGTPGQCYR------CQLYGHSARNCHARPRCVKCLGDHATLDCVR 39
RRGTP C C HS R C + RC+ C + C R
Sbjct: 994 RRGTPNDCQPEATRAPCHCNNHSPRGCDSFGRCLLCEHNTEGTHCER 1040
>U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical
protein C16A3.7 protein.
Length = 1119
Score = 28.3 bits (60), Expect = 6.6
Identities = 10/33 (30%), Positives = 16/33 (48%)
Frame = -1
Query: 149 PGQCYRCQLYGHSARNCHARPRCVKCLGDHATL 51
PG C C+L+ + NC + V+C D +
Sbjct: 340 PGPCIECKLFTTKSCNCGKTKKSVRCGSDQEVM 372
>U41278-7|AAT81193.1| 680|Caenorhabditis elegans Hypothetical
protein F33G12.6b protein.
Length = 680
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = -1
Query: 410 QEDRELRVVIRGVPKELEIDYIKEDLTAQALPIVSVHRMH 291
+EDR L V RG K+ +Y + A +LP V + H
Sbjct: 412 REDRTLDVTTRGGEKDKHSEYARNRPCAASLPCVDAAKRH 451
>U41278-6|AAK31510.3| 771|Caenorhabditis elegans Hypothetical
protein F33G12.6a protein.
Length = 771
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = -1
Query: 410 QEDRELRVVIRGVPKELEIDYIKEDLTAQALPIVSVHRMH 291
+EDR L V RG K+ +Y + A +LP V + H
Sbjct: 412 REDRTLDVTTRGGEKDKHSEYARNRPCAASLPCVDAAKRH 451
>AC006672-5|AAM98003.1| 42|Caenorhabditis elegans Hypothetical
protein K08D12.3b protein.
Length = 42
Score = 28.3 bits (60), Expect = 6.6
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = -1
Query: 140 CYRCQLYGHSARNC 99
CY+CQ GH +RNC
Sbjct: 6 CYKCQQPGHISRNC 19
>AC006672-4|AAK84542.1| 151|Caenorhabditis elegans Hypothetical
protein K08D12.3a protein.
Length = 151
Score = 28.3 bits (60), Expect = 6.6
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = -1
Query: 140 CYRCQLYGHSARNC 99
CY+CQ GH +RNC
Sbjct: 6 CYKCQQPGHISRNC 19
Score = 27.9 bits (59), Expect = 8.7
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Frame = -1
Query: 197 CGLSG-ISIEAPHRRGTPGQ-CYRCQLYGHSARNC 99
CG SG IS E + CY+CQ GH +R+C
Sbjct: 112 CGRSGHISRECTESGSAEEKRCYQCQETGHISRDC 146
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 27.9 bits (59), Expect = 8.7
Identities = 17/61 (27%), Positives = 23/61 (37%)
Frame = -3
Query: 498 SDQGRNAGRP*GPLSIPPKGEHRFPHLCSSGGPRAPRSNTRSP*GARNRLH*GGSDRSGP 319
S R P S PP R P S P+ +S ++SP R + +S P
Sbjct: 299 SGSPRRRRSPSASKSPPPARRRRSPSQSKSPAPKRAKSRSKSPPAPARRRRSPSASKSPP 358
Query: 318 P 316
P
Sbjct: 359 P 359
>Z71181-6|CAA94899.1| 647|Caenorhabditis elegans Hypothetical
protein K07C5.6 protein.
Length = 647
Score = 27.9 bits (59), Expect = 8.7
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = -1
Query: 146 GQCYRCQLYGHSARNCHARPR 84
G C C GH R+C RPR
Sbjct: 113 GACENCGAMGHQKRDCFDRPR 133
>Z68493-3|CAA92788.1| 61|Caenorhabditis elegans Hypothetical
protein C33A12.4 protein.
Length = 61
Score = 27.9 bits (59), Expect = 8.7
Identities = 14/49 (28%), Positives = 23/49 (46%)
Frame = -1
Query: 365 ELEIDYIKEDLTAQALPIVSVHRMHSGRGKQPYNMILVALEPTPEAKKK 219
++E+DY K D + +P + H GR Y+ V PT ++K
Sbjct: 11 DVEVDYSKYDEDSVPIPEKDIEESHPGRPDLDYDETPVGPAPTECTEEK 59
>U80837-3|AAB37904.2| 384|Caenorhabditis elegans Hypothetical
protein F07E5.5 protein.
Length = 384
Score = 27.9 bits (59), Expect = 8.7
Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 4/38 (10%)
Frame = -1
Query: 197 CGLSGISIEAPHRRGTPG----QCYRCQLYGHSARNCH 96
CG SI ++G G C+ C+ GH +R+CH
Sbjct: 259 CGSMEHSIHECKKKGVKGFPYATCFVCKQVGHISRDCH 296
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,520,530
Number of Sequences: 27780
Number of extensions: 339085
Number of successful extensions: 942
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 799
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 942
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1893203640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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