Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP11_T7_F08
(803 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23177-4|AAM22055.1| 374|Caenorhabditis elegans Hypothetical pr... 42 4e-04
AC006605-4|AAK85441.2| 1378|Caenorhabditis elegans Hypothetical ... 32 0.55
AL034489-8|CAI79278.1| 67|Caenorhabditis elegans Hypothetical ... 30 1.7
U39853-8|AAQ81277.1| 1609|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 29 2.9
AL117195-31|CAN99709.1| 1459|Caenorhabditis elegans Hypothetical... 29 2.9
AL117195-30|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical... 29 2.9
U39853-6|AAM54193.2| 1632|Caenorhabditis elegans Hypothetical pr... 29 3.9
AF039038-8|AAM81097.1| 874|Caenorhabditis elegans Hypothetical ... 29 5.1
AF039038-7|AAM81098.1| 942|Caenorhabditis elegans Hypothetical ... 29 5.1
Z66515-3|CAA91352.1| 322|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z66515-2|CAA91353.1| 543|Caenorhabditis elegans Hypothetical pr... 28 6.8
U39648-3|AAM15603.1| 434|Caenorhabditis elegans Hypothetical pr... 28 6.8
U21308-8|AAN60509.2| 807|Caenorhabditis elegans Nfi (nuclear fa... 28 6.8
S66936-1|AAB28820.1| 360|Caenorhabditis elegans Egl-43 protein. 28 6.8
S66757-1|AAB28819.1| 581|Caenorhabditis elegans Egl-43 protein. 28 6.8
AC084197-36|AAG23464.2| 381|Caenorhabditis elegans Hypothetical... 28 6.8
>U23177-4|AAM22055.1| 374|Caenorhabditis elegans Hypothetical
protein C56G2.7 protein.
Length = 374
Score = 42.3 bits (95), Expect = 4e-04
Identities = 30/86 (34%), Positives = 40/86 (46%), Gaps = 16/86 (18%)
Frame = -3
Query: 300 VNVDLGSVLSASDVVSTASAPENAVRLAPHLPAQDDAANQFSS----------------A 169
V V L + LS V A +A LAPHLP DD A + S A
Sbjct: 244 VAVSLATALSNETVAEVAR--NHAEELAPHLPTSDDPARELSETVRTPQFRQAADTLGHA 301
Query: 168 VGSGQMGPVMSQFGLPSEVSSAANNG 91
+ +GQ+GPV++QFG+ +AN G
Sbjct: 302 LQTGQLGPVVAQFGMDEATVGSANQG 327
>AC006605-4|AAK85441.2| 1378|Caenorhabditis elegans Hypothetical
protein C07H6.3 protein.
Length = 1378
Score = 31.9 bits (69), Expect = 0.55
Identities = 17/49 (34%), Positives = 24/49 (48%)
Frame = +2
Query: 218 ASRTAFSGAEAVDTTSEADRTLPRSTLTAPATGAVLDAPFPSGGAVPSS 364
AS T+F+ + + T T +S AP T + L P PSGG + S
Sbjct: 270 ASTTSFTSSARLSTPPRPTTTAAQSLSLAPQTPSPLSLPSPSGGQMSRS 318
>AL034489-8|CAI79278.1| 67|Caenorhabditis elegans Hypothetical
protein Y7A5A.10 protein.
Length = 67
Score = 30.3 bits (65), Expect = 1.7
Identities = 18/41 (43%), Positives = 25/41 (60%)
Frame = -3
Query: 357 GTAPPEGNGASRTAPVAGAVNVDLGSVLSASDVVSTASAPE 235
GTAP NGAS+T AGA+ +L + + VSTA+A +
Sbjct: 23 GTAPK--NGASQTLQRAGAIEAELRAAEAKWTPVSTANAQD 61
>U39853-8|AAQ81277.1| 1609|Caenorhabditis elegans Hypothetical protein
F13B9.1c protein.
Length = 1609
Score = 29.9 bits (64), Expect = 2.2
Identities = 25/78 (32%), Positives = 32/78 (41%)
Frame = -3
Query: 366 SELGTAPPEGNGASRTAPVAGAVNVDLGSVLSASDVVSTASAPENAVRLAPHLPAQDDAA 187
++ G APP G G R A + V G+ SAS + AP +PA D
Sbjct: 1526 AQAGPAPPVGGGGLRAARASRYARVG-GTSSSASQAPAGMMAPAPPTANFGFIPAPVDND 1584
Query: 186 NQFSSAVGSGQMGPVMSQ 133
N S SGQ P + Q
Sbjct: 1585 ND-SVDPFSGQANPTIMQ 1601
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.5 bits (63), Expect = 2.9
Identities = 20/91 (21%), Positives = 29/91 (31%)
Frame = +2
Query: 92 PLFAADETSDGKPNCDITGPICPEPTAEEN*FAASSWAGRCGASRTAFSGAEAVDTTSEA 271
P A S G + + P PEP ++ A + +SG +
Sbjct: 566 PEAAPAAPSGGYSGSESSAPAAPEPAPSSGGYSGGGGDAGSAAGGSNYSGGGETAPAAPP 625
Query: 272 DRTLPRSTLTAPATGAVLDAPFPSGGAVPSS 364
P T + + AP PSGG S
Sbjct: 626 PAPEPAQTYSGAGGESAAAAPAPSGGGYSGS 656
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.5 bits (63), Expect = 2.9
Identities = 20/91 (21%), Positives = 29/91 (31%)
Frame = +2
Query: 92 PLFAADETSDGKPNCDITGPICPEPTAEEN*FAASSWAGRCGASRTAFSGAEAVDTTSEA 271
P A S G + + P PEP ++ A + +SG +
Sbjct: 566 PEAAPAAPSGGYSGSESSAPAAPEPAPSSGGYSGGGGDAGSAAGGSNYSGGGETAPAAPP 625
Query: 272 DRTLPRSTLTAPATGAVLDAPFPSGGAVPSS 364
P T + + AP PSGG S
Sbjct: 626 PAPEPAQTYSGAGGESAAAAPAPSGGGYSGS 656
>AL117195-31|CAN99709.1| 1459|Caenorhabditis elegans Hypothetical
protein Y57A10A.18b protein.
Length = 1459
Score = 29.5 bits (63), Expect = 2.9
Identities = 20/51 (39%), Positives = 27/51 (52%)
Frame = +2
Query: 218 ASRTAFSGAEAVDTTSEADRTLPRSTLTAPATGAVLDAPFPSGGAVPSSEK 370
+S T+ G AVDTTS + ST PA A +P PSG P+++K
Sbjct: 41 SSSTSHVGTGAVDTTSSSASASGAST---PANQAASSSPAPSG--APAADK 86
>AL117195-30|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical
protein Y57A10A.18a protein.
Length = 1456
Score = 29.5 bits (63), Expect = 2.9
Identities = 20/51 (39%), Positives = 27/51 (52%)
Frame = +2
Query: 218 ASRTAFSGAEAVDTTSEADRTLPRSTLTAPATGAVLDAPFPSGGAVPSSEK 370
+S T+ G AVDTTS + ST PA A +P PSG P+++K
Sbjct: 41 SSSTSHVGTGAVDTTSSSASASGAST---PANQAASSSPAPSG--APAADK 86
>U39853-6|AAM54193.2| 1632|Caenorhabditis elegans Hypothetical protein
F13B9.1a protein.
Length = 1632
Score = 29.1 bits (62), Expect = 3.9
Identities = 25/78 (32%), Positives = 31/78 (39%)
Frame = -3
Query: 366 SELGTAPPEGNGASRTAPVAGAVNVDLGSVLSASDVVSTASAPENAVRLAPHLPAQDDAA 187
++ G APP G G R A A G+ SAS + AP +PA D
Sbjct: 1548 AQAGPAPPVGGGGLRAARGASRYARVGGTSSSASQAPAGMMAPAPPTANFGFIPAPVDND 1607
Query: 186 NQFSSAVGSGQMGPVMSQ 133
N S SGQ P + Q
Sbjct: 1608 ND-SVDPFSGQANPTIMQ 1624
>AF039038-8|AAM81097.1| 874|Caenorhabditis elegans Hypothetical
protein K06A5.8a protein.
Length = 874
Score = 28.7 bits (61), Expect = 5.1
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 3/48 (6%)
Frame = -1
Query: 224 DWRHTCPPRTMPQIS---FLQRWVPDRWGQ*CHNSAYRRKSHLLQITG 90
D+RH C T+P++S + W P C N + HLL TG
Sbjct: 147 DYRHLCALLTLPKLSDHEDFKNWNPSSARVECFNKVNQLCGHLLPPTG 194
>AF039038-7|AAM81098.1| 942|Caenorhabditis elegans Hypothetical
protein K06A5.8b protein.
Length = 942
Score = 28.7 bits (61), Expect = 5.1
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 3/48 (6%)
Frame = -1
Query: 224 DWRHTCPPRTMPQIS---FLQRWVPDRWGQ*CHNSAYRRKSHLLQITG 90
D+RH C T+P++S + W P C N + HLL TG
Sbjct: 147 DYRHLCALLTLPKLSDHEDFKNWNPSSARVECFNKVNQLCGHLLPPTG 194
>Z66515-3|CAA91352.1| 322|Caenorhabditis elegans Hypothetical
protein R53.3b protein.
Length = 322
Score = 28.3 bits (60), Expect = 6.8
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = -1
Query: 401 DKYSCRICSVTFPN*AQLRRKGTVRQGRPP 312
D+Y+C+ C FP A L R G P
Sbjct: 221 DRYTCKFCQKVFPRSANLTRHLRTHTGEQP 250
>Z66515-2|CAA91353.1| 543|Caenorhabditis elegans Hypothetical
protein R53.3a protein.
Length = 543
Score = 28.3 bits (60), Expect = 6.8
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = -1
Query: 401 DKYSCRICSVTFPN*AQLRRKGTVRQGRPP 312
D+Y+C+ C FP A L R G P
Sbjct: 442 DRYTCKFCQKVFPRSANLTRHLRTHTGEQP 471
>U39648-3|AAM15603.1| 434|Caenorhabditis elegans Hypothetical
protein T13C5.2 protein.
Length = 434
Score = 28.3 bits (60), Expect = 6.8
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = -2
Query: 490 HTYCCNRHNHGHNDC 446
H CCN HNH N C
Sbjct: 192 HNNCCNYHNHSCNAC 206
>U21308-8|AAN60509.2| 807|Caenorhabditis elegans Nfi (nuclear
factor i) family protein1, isoform a protein.
Length = 807
Score = 28.3 bits (60), Expect = 6.8
Identities = 19/53 (35%), Positives = 27/53 (50%)
Frame = -3
Query: 255 STASAPENAVRLAPHLPAQDDAANQFSSAVGSGQMGPVMSQFGLPSEVSSAAN 97
ST+ AP+++ P D +NQF+S MGP + Q LP +SA N
Sbjct: 23 STSEAPQDSQAQQTMPPPSSDWSNQFNSPEAE-DMGPFVEQL-LPFVRASAYN 73
>S66936-1|AAB28820.1| 360|Caenorhabditis elegans Egl-43 protein.
Length = 360
Score = 28.3 bits (60), Expect = 6.8
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = -1
Query: 401 DKYSCRICSVTFPN*AQLRRKGTVRQGRPP 312
D+Y+C+ C FP A L R G P
Sbjct: 221 DRYTCKFCQKVFPRSANLTRHLRTHTGEQP 250
>S66757-1|AAB28819.1| 581|Caenorhabditis elegans Egl-43 protein.
Length = 581
Score = 28.3 bits (60), Expect = 6.8
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = -1
Query: 401 DKYSCRICSVTFPN*AQLRRKGTVRQGRPP 312
D+Y+C+ C FP A L R G P
Sbjct: 442 DRYTCKFCQKVFPRSANLTRHLRTHTGEQP 471
>AC084197-36|AAG23464.2| 381|Caenorhabditis elegans Hypothetical
protein Y73B6BL.24 protein.
Length = 381
Score = 28.3 bits (60), Expect = 6.8
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -2
Query: 406 KRTNIPVGSAALLFRTRHSSAGRERCVKDGPRSW 305
K I S +LF TRH + E +++ PRSW
Sbjct: 22 KSVAIDKNSVLVLFGTRHGNRHPEVFLQENPRSW 55
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,979,627
Number of Sequences: 27780
Number of extensions: 310795
Number of successful extensions: 1010
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 931
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1010
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1966828226
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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