Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP11_T7_F03
(710 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X05562-1|CAA29076.1| 1043|Homo sapiens protein ( Human mRNA for ... 31 4.1
J04177-1|AAA51891.1| 1806|Homo sapiens COL11A1 protein. 31 4.1
BC117697-1|AAI17698.1| 1690|Homo sapiens COL11A1 protein protein. 31 4.1
AL627203-1|CAH73908.1| 1806|Homo sapiens collagen type XI alpha ... 31 4.1
AL161773-3|CAH71366.2| 1712|Homo sapiens collagen type IV alpha ... 31 4.1
AL159153-1|CAH72050.2| 1712|Homo sapiens collagen type IV alpha ... 31 4.1
AL139385-2|CAI17005.2| 1712|Homo sapiens collagen type IV alpha ... 31 4.1
AF101112-3|AAF04724.1| 1767|Homo sapiens collagen type XI alpha-... 31 4.1
AF101112-2|AAF04726.1| 1818|Homo sapiens collagen type XI alpha-... 31 4.1
AF101112-1|AAF04725.1| 1806|Homo sapiens collagen type XI alpha-... 31 4.1
AB208844-1|BAD92081.1| 1017|Homo sapiens alpha 1 type XI collage... 31 4.1
Z74615-1|CAA98968.1| 1464|Homo sapiens prepro-alpha1(I) collagen... 31 5.4
X98705-1|CAA67261.1| 1069|Homo sapiens collagen type I alpha 1 p... 31 5.4
K01228-1|AAA51995.1| 1040|Homo sapiens COL1A1 protein. 31 5.4
BC036531-1|AAH36531.1| 1464|Homo sapiens collagen, type I, alpha... 31 5.4
AF017178-1|AAB94054.2| 1461|Homo sapiens pro alpha 1(I) collagen... 31 5.4
AB209597-1|BAD92834.1| 1467|Homo sapiens Collagen alpha 1 chain ... 31 5.4
AF177941-1|AAF59902.1| 1745|Homo sapiens collagen type V alpha 3... 30 7.1
AB209175-1|BAD92412.1| 1658|Homo sapiens collagen, type V, alpha... 30 7.1
X16711-1|CAA34683.1| 1160|Homo sapiens COL2A1 protein. 30 9.4
X16468-1|CAA34488.1| 1418|Homo sapiens protein ( Human mRNA for ... 30 9.4
X13783-1|CAA32030.1| 714|Homo sapiens alpha-1 type 2 collagen (... 30 9.4
L10347-1|AAC41772.1| 1487|Homo sapiens alpha-1 type II collagen ... 30 9.4
BC116449-1|AAI16450.1| 1487|Homo sapiens collagen, type II, alph... 30 9.4
>X05562-1|CAA29076.1| 1043|Homo sapiens protein ( Human mRNA for
alpha-2 chain of collagen IV N-terminus. ).
Length = 1043
Score = 31.1 bits (67), Expect = 4.1
Identities = 18/69 (26%), Positives = 22/69 (31%)
Frame = +1
Query: 106 PGXGGXNGSXXIXKXXGLKXXQXXLKTPXPXGXXXPXXKKGPXXXKGGXGPPXRXFXXKK 285
PG G G G + + + P P G P GP G G P +
Sbjct: 722 PGDAGREGFPGPPGFIGPRGSKGAVGLPGPDGSPGPIGLPGPDGPPGERGLPGEVLGAQP 781
Query: 286 XPGGGGGXP 312
P G G P
Sbjct: 782 GPRGDAGVP 790
>J04177-1|AAA51891.1| 1806|Homo sapiens COL11A1 protein.
Length = 1806
Score = 31.1 bits (67), Expect = 4.1
Identities = 17/56 (30%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Frame = +1
Query: 97 FPX-PGXGGXNGSXXIXKXXGLKXXQXXLKTPXPXGXXXPXXKKGPXXXKGGXGPP 261
FP PG G G+ + G + + G P K GP GG GPP
Sbjct: 857 FPGFPGANGEKGARGVAGKPGPRGQRGPTGPRGSRGARGPTGKPGPKGTSGGDGPP 912
>BC117697-1|AAI17698.1| 1690|Homo sapiens COL11A1 protein protein.
Length = 1690
Score = 31.1 bits (67), Expect = 4.1
Identities = 17/56 (30%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Frame = +1
Query: 97 FPX-PGXGGXNGSXXIXKXXGLKXXQXXLKTPXPXGXXXPXXKKGPXXXKGGXGPP 261
FP PG G G+ + G + + G P K GP GG GPP
Sbjct: 741 FPGFPGANGEKGARGVAGKPGPRGQRGPTGPRGSRGARGPTGKPGPKGTSGGDGPP 796
>AL627203-1|CAH73908.1| 1806|Homo sapiens collagen type XI alpha 1
protein.
Length = 1806
Score = 31.1 bits (67), Expect = 4.1
Identities = 17/56 (30%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Frame = +1
Query: 97 FPX-PGXGGXNGSXXIXKXXGLKXXQXXLKTPXPXGXXXPXXKKGPXXXKGGXGPP 261
FP PG G G+ + G + + G P K GP GG GPP
Sbjct: 857 FPGFPGANGEKGARGVAGKPGPRGQRGPTGPRGSRGARGPTGKPGPKGTSGGDGPP 912
>AL161773-3|CAH71366.2| 1712|Homo sapiens collagen type IV alpha 2
protein.
Length = 1712
Score = 31.1 bits (67), Expect = 4.1
Identities = 18/69 (26%), Positives = 22/69 (31%)
Frame = +1
Query: 106 PGXGGXNGSXXIXKXXGLKXXQXXLKTPXPXGXXXPXXKKGPXXXKGGXGPPXRXFXXKK 285
PG G G G + + + P P G P GP G G P +
Sbjct: 722 PGDAGREGFPGPPGFIGPRGSKGAVGLPGPDGSPGPIGLPGPDGPPGERGLPGEVLGAQP 781
Query: 286 XPGGGGGXP 312
P G G P
Sbjct: 782 GPRGDAGVP 790
>AL159153-1|CAH72050.2| 1712|Homo sapiens collagen type IV alpha 2
protein.
Length = 1712
Score = 31.1 bits (67), Expect = 4.1
Identities = 18/69 (26%), Positives = 22/69 (31%)
Frame = +1
Query: 106 PGXGGXNGSXXIXKXXGLKXXQXXLKTPXPXGXXXPXXKKGPXXXKGGXGPPXRXFXXKK 285
PG G G G + + + P P G P GP G G P +
Sbjct: 722 PGDAGREGFPGPPGFIGPRGSKGAVGLPGPDGSPGPIGLPGPDGPPGERGLPGEVLGAQP 781
Query: 286 XPGGGGGXP 312
P G G P
Sbjct: 782 GPRGDAGVP 790
>AL139385-2|CAI17005.2| 1712|Homo sapiens collagen type IV alpha 2
protein.
Length = 1712
Score = 31.1 bits (67), Expect = 4.1
Identities = 18/69 (26%), Positives = 22/69 (31%)
Frame = +1
Query: 106 PGXGGXNGSXXIXKXXGLKXXQXXLKTPXPXGXXXPXXKKGPXXXKGGXGPPXRXFXXKK 285
PG G G G + + + P P G P GP G G P +
Sbjct: 722 PGDAGREGFPGPPGFIGPRGSKGAVGLPGPDGSPGPIGLPGPDGPPGERGLPGEVLGAQP 781
Query: 286 XPGGGGGXP 312
P G G P
Sbjct: 782 GPRGDAGVP 790
>AF101112-3|AAF04724.1| 1767|Homo sapiens collagen type XI alpha-1
protein.
Length = 1767
Score = 31.1 bits (67), Expect = 4.1
Identities = 17/56 (30%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Frame = +1
Query: 97 FPX-PGXGGXNGSXXIXKXXGLKXXQXXLKTPXPXGXXXPXXKKGPXXXKGGXGPP 261
FP PG G G+ + G + + G P K GP GG GPP
Sbjct: 818 FPGFPGANGEKGARGVAGKPGPRGQRGPTGPRGSRGARGPTGKPGPKGTSGGDGPP 873
>AF101112-2|AAF04726.1| 1818|Homo sapiens collagen type XI alpha-a
isoform B protein.
Length = 1818
Score = 31.1 bits (67), Expect = 4.1
Identities = 17/56 (30%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Frame = +1
Query: 97 FPX-PGXGGXNGSXXIXKXXGLKXXQXXLKTPXPXGXXXPXXKKGPXXXKGGXGPP 261
FP PG G G+ + G + + G P K GP GG GPP
Sbjct: 869 FPGFPGANGEKGARGVAGKPGPRGQRGPTGPRGSRGARGPTGKPGPKGTSGGDGPP 924
>AF101112-1|AAF04725.1| 1806|Homo sapiens collagen type XI alpha-1
isoform A protein.
Length = 1806
Score = 31.1 bits (67), Expect = 4.1
Identities = 17/56 (30%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Frame = +1
Query: 97 FPX-PGXGGXNGSXXIXKXXGLKXXQXXLKTPXPXGXXXPXXKKGPXXXKGGXGPP 261
FP PG G G+ + G + + G P K GP GG GPP
Sbjct: 857 FPGFPGANGEKGARGVAGKPGPRGQRGPTGPRGSRGARGPTGKPGPKGTSGGDGPP 912
>AB208844-1|BAD92081.1| 1017|Homo sapiens alpha 1 type XI collagen
isoform C preproprotein variant protein.
Length = 1017
Score = 31.1 bits (67), Expect = 4.1
Identities = 17/56 (30%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Frame = +1
Query: 97 FPX-PGXGGXNGSXXIXKXXGLKXXQXXLKTPXPXGXXXPXXKKGPXXXKGGXGPP 261
FP PG G G+ + G + + G P K GP GG GPP
Sbjct: 68 FPGFPGANGEKGARGVAGKPGPRGQRGPTGPRGSRGARGPTGKPGPKGTSGGDGPP 123
>Z74615-1|CAA98968.1| 1464|Homo sapiens prepro-alpha1(I) collagen
protein.
Length = 1464
Score = 30.7 bits (66), Expect = 5.4
Identities = 16/51 (31%), Positives = 18/51 (35%)
Frame = +1
Query: 106 PGXGGXNGSXXIXKXXGLKXXQXXLKTPXPXGXXXPXXKKGPXXXKGGXGP 258
PG G GS G + P P G P GP +GG GP
Sbjct: 859 PGAKGARGSAGPPGATGFPGAAGRVGPPGPSGNAGPPGPPGPAGKEGGKGP 909
>X98705-1|CAA67261.1| 1069|Homo sapiens collagen type I alpha 1
protein.
Length = 1069
Score = 30.7 bits (66), Expect = 5.4
Identities = 16/51 (31%), Positives = 18/51 (35%)
Frame = +1
Query: 106 PGXGGXNGSXXIXKXXGLKXXQXXLKTPXPXGXXXPXXKKGPXXXKGGXGP 258
PG G GS G + P P G P GP +GG GP
Sbjct: 859 PGAKGARGSAGPPGATGFPGAAGRVGPPGPSGNAGPPGPPGPAGKEGGKGP 909
>K01228-1|AAA51995.1| 1040|Homo sapiens COL1A1 protein.
Length = 1040
Score = 30.7 bits (66), Expect = 5.4
Identities = 16/51 (31%), Positives = 18/51 (35%)
Frame = +1
Query: 106 PGXGGXNGSXXIXKXXGLKXXQXXLKTPXPXGXXXPXXKKGPXXXKGGXGP 258
PG G GS G + P P G P GP +GG GP
Sbjct: 435 PGAKGARGSAGPPGATGFPGAAGRVGPPGPSGNAGPPGPPGPAGKEGGKGP 485
>BC036531-1|AAH36531.1| 1464|Homo sapiens collagen, type I, alpha 1
protein.
Length = 1464
Score = 30.7 bits (66), Expect = 5.4
Identities = 16/51 (31%), Positives = 18/51 (35%)
Frame = +1
Query: 106 PGXGGXNGSXXIXKXXGLKXXQXXLKTPXPXGXXXPXXKKGPXXXKGGXGP 258
PG G GS G + P P G P GP +GG GP
Sbjct: 859 PGAKGARGSAGPPGATGFPGAAGRVGPPGPSGNAGPPGPPGPAGKEGGKGP 909
>AF017178-1|AAB94054.2| 1461|Homo sapiens pro alpha 1(I) collagen
protein.
Length = 1461
Score = 30.7 bits (66), Expect = 5.4
Identities = 16/51 (31%), Positives = 18/51 (35%)
Frame = +1
Query: 106 PGXGGXNGSXXIXKXXGLKXXQXXLKTPXPXGXXXPXXKKGPXXXKGGXGP 258
PG G GS G + P P G P GP +GG GP
Sbjct: 856 PGAKGARGSAGPPGATGFPGAAGRVGPPGPSGNAGPPGPPGPAGKEGGKGP 906
>AB209597-1|BAD92834.1| 1467|Homo sapiens Collagen alpha 1 chain
precursor variant protein.
Length = 1467
Score = 30.7 bits (66), Expect = 5.4
Identities = 16/51 (31%), Positives = 18/51 (35%)
Frame = +1
Query: 106 PGXGGXNGSXXIXKXXGLKXXQXXLKTPXPXGXXXPXXKKGPXXXKGGXGP 258
PG G GS G + P P G P GP +GG GP
Sbjct: 862 PGAKGARGSAGPPGATGFPGAAGRVGPPGPSGNAGPPGPPGPAGKEGGKGP 912
>AF177941-1|AAF59902.1| 1745|Homo sapiens collagen type V alpha 3
chain protein.
Length = 1745
Score = 30.3 bits (65), Expect = 7.1
Identities = 17/51 (33%), Positives = 18/51 (35%)
Frame = +1
Query: 109 GXGGXNGSXXIXKXXGLKXXQXXLKTPXPXGXXXPXXKKGPXXXKGGXGPP 261
G G +G GLK Q P P G P KG G GPP
Sbjct: 728 GEKGEDGFPGFKGDVGLKGDQGKPGAPGPRGEDGPEGPKGQAGQAGEEGPP 778
Score = 29.9 bits (64), Expect = 9.4
Identities = 16/52 (30%), Positives = 20/52 (38%)
Frame = +1
Query: 106 PGXGGXNGSXXIXKXXGLKXXQXXLKTPXPXGXXXPXXKKGPXXXKGGXGPP 261
PG G G + G + + L P P G P +G KGG G P
Sbjct: 937 PGPPGPPGEQGLPGLEGREGAKGELGPPGPLGKEGPAGLRGFPGPKGGPGDP 988
>AB209175-1|BAD92412.1| 1658|Homo sapiens collagen, type V, alpha 3
preproprotein variant protein.
Length = 1658
Score = 30.3 bits (65), Expect = 7.1
Identities = 17/51 (33%), Positives = 18/51 (35%)
Frame = +1
Query: 109 GXGGXNGSXXIXKXXGLKXXQXXLKTPXPXGXXXPXXKKGPXXXKGGXGPP 261
G G +G GLK Q P P G P KG G GPP
Sbjct: 641 GEKGEDGFPGFKGDVGLKGDQGKPGAPGPRGEDGPEGPKGQAGQAGEEGPP 691
Score = 29.9 bits (64), Expect = 9.4
Identities = 16/52 (30%), Positives = 20/52 (38%)
Frame = +1
Query: 106 PGXGGXNGSXXIXKXXGLKXXQXXLKTPXPXGXXXPXXKKGPXXXKGGXGPP 261
PG G G + G + + L P P G P +G KGG G P
Sbjct: 850 PGPPGPPGEQGLPGLEGREGAKGELGPPGPLGKEGPAGLRGFPGPKGGPGDP 901
>X16711-1|CAA34683.1| 1160|Homo sapiens COL2A1 protein.
Length = 1160
Score = 29.9 bits (64), Expect = 9.4
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +1
Query: 187 PXPXGXXXPXXKKGPXXXKGGXGPPXR 267
P P G P K GP +G GPP R
Sbjct: 845 PGPPGPPGPSGKDGPKGARGDSGPPGR 871
>X16468-1|CAA34488.1| 1418|Homo sapiens protein ( Human mRNA for
alpha-1 type II collagen. ).
Length = 1418
Score = 29.9 bits (64), Expect = 9.4
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +1
Query: 187 PXPXGXXXPXXKKGPXXXKGGXGPPXR 267
P P G P K GP +G GPP R
Sbjct: 845 PGPPGPPGPSGKDGPKGARGDSGPPGR 871
>X13783-1|CAA32030.1| 714|Homo sapiens alpha-1 type 2 collagen (714
AA) protein.
Length = 714
Score = 29.9 bits (64), Expect = 9.4
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +1
Query: 187 PXPXGXXXPXXKKGPXXXKGGXGPPXR 267
P P G P K GP +G GPP R
Sbjct: 414 PGPPGPPGPSGKDGPKGARGDSGPPGR 440
>L10347-1|AAC41772.1| 1487|Homo sapiens alpha-1 type II collagen
protein.
Length = 1487
Score = 29.9 bits (64), Expect = 9.4
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +1
Query: 187 PXPXGXXXPXXKKGPXXXKGGXGPPXR 267
P P G P K GP +G GPP R
Sbjct: 914 PGPPGPPGPSGKDGPKGARGDSGPPGR 940
>BC116449-1|AAI16450.1| 1487|Homo sapiens collagen, type II, alpha 1
(primary osteoarthritis, spondyloepiphyseal dysplasi
protein.
Length = 1487
Score = 29.9 bits (64), Expect = 9.4
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +1
Query: 187 PXPXGXXXPXXKKGPXXXKGGXGPPXR 267
P P G P K GP +G GPP R
Sbjct: 914 PGPPGPPGPSGKDGPKGARGDSGPPGR 940
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,160,438
Number of Sequences: 237096
Number of extensions: 1247042
Number of successful extensions: 4261
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1681
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3953
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8287202872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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