Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP11_T7_F02
         (777 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U23172-13|ABH03527.1|  282|Caenorhabditis elegans Hypothetical p...    29   4.9  
U23172-12|ABH03526.1|  562|Caenorhabditis elegans Hypothetical p...    29   4.9  
Z68338-7|CAA92756.2|  866|Caenorhabditis elegans Hypothetical pr...    28   8.6  

>U23172-13|ABH03527.1|  282|Caenorhabditis elegans Hypothetical
           protein F25B5.7c protein.
          Length = 282

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 12/25 (48%), Positives = 12/25 (48%)
 Frame = -1

Query: 372 PPRRXGGGXXXXPPGGFXXXPLXGG 298
           PP   GGG    PPGG    P  GG
Sbjct: 155 PPLMGGGGDPRGPPGGMGGPPGHGG 179


>U23172-12|ABH03526.1|  562|Caenorhabditis elegans Hypothetical
           protein F25B5.7a protein.
          Length = 562

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 12/25 (48%), Positives = 12/25 (48%)
 Frame = -1

Query: 372 PPRRXGGGXXXXPPGGFXXXPLXGG 298
           PP   GGG    PPGG    P  GG
Sbjct: 435 PPLMGGGGDPRGPPGGMGGPPGHGG 459


>Z68338-7|CAA92756.2|  866|Caenorhabditis elegans Hypothetical
           protein T24B8.4 protein.
          Length = 866

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 14/37 (37%), Positives = 15/37 (40%)
 Frame = +2

Query: 350 PPPXRRGGV*KKIFXXGGAPPXXGXFXFFXXPPPXGG 460
           PPP   GG+       GG PP    F     PPP  G
Sbjct: 86  PPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPPSG 122


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,484,668
Number of Sequences: 27780
Number of extensions: 191517
Number of successful extensions: 123
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 100
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 121
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1872168044
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)