Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP11_T7_F01
         (791 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0302 - 2286171-2286341,2286747-2286968                           29   4.2  
07_01_0715 + 5463705-5463853,5463934-5464287,5464849-5464932,546...    29   4.2  
07_01_0712 - 5381641-5381667,5382107-5382261,5382917-5383006,538...    29   4.2  
09_04_0737 - 19822822-19822973,19823069-19823135,19823666-198238...    29   5.6  
02_05_0640 - 30558523-30559027,30559123-30559252,30559388-305598...    29   5.6  
02_02_0718 - 13290764-13290897,13292375-13293041,13293364-132937...    28   9.8  

>12_01_0302 - 2286171-2286341,2286747-2286968
          Length = 130

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +1

Query: 88  RLQRSRKKHGEDLPTGGRSRRKGEKLE*MQREEQ 189
           RL+R RK +  D+   G  + +GEKLE  + +E+
Sbjct: 57  RLERLRKGYARDVRAAGAMKVRGEKLENWREKEK 90


>07_01_0715 +
           5463705-5463853,5463934-5464287,5464849-5464932,
           5465170-5465270,5465603-5465665,5466198-5466287,
           5466390-5466479,5467135-5467289,5467729-5467755
          Length = 370

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
 Frame = -1

Query: 716 PPSPGISGGSTRXSNPRFXTPTTPRLNIHFHQSPDAVXEGVRAGG*SXCCHQRLHQR--- 546
           PPS G +G   R  +       T  L +H H+S   V  G +AG      H+RL+ +   
Sbjct: 85  PPSSGSTGQRRRRGSHLSEEAQTLLLFLHMHKSFADVVAGNKAGAAWSDKHRRLYAQSSG 144

Query: 545 VSPXRHWA 522
           +SP  H A
Sbjct: 145 LSPYSHAA 152


>07_01_0712 -
           5381641-5381667,5382107-5382261,5382917-5383006,
           5383109-5383198,5383731-5383793,5384126-5384226,
           5384464-5384547,5385109-5385462,5385543-5385691
          Length = 370

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
 Frame = -1

Query: 716 PPSPGISGGSTRXSNPRFXTPTTPRLNIHFHQSPDAVXEGVRAGG*SXCCHQRLHQR--- 546
           PPS G +G   R  +       T  L +H H+S   V  G +AG      H+RL+ +   
Sbjct: 85  PPSSGSTGQRRRRGSHLSEEAQTLLLFLHMHKSFADVVAGNKAGAAWSDKHRRLYAQSSG 144

Query: 545 VSPXRHWA 522
           +SP  H A
Sbjct: 145 LSPYSHAA 152


>09_04_0737 -
           19822822-19822973,19823069-19823135,19823666-19823822,
           19824003-19824177,19824364-19824481,19824676-19824874,
           19824983-19825062,19825141-19825257,19825791-19825961,
           19826121-19826597
          Length = 570

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 18/49 (36%), Positives = 25/49 (51%)
 Frame = +2

Query: 80  FYVDSKGVGRNMARIYQLAVDLGGRERSLNRCREKSSFVVLKNRPDVVV 226
           F+VD  G G +  ++++LAV+ G R      CR     VV     DVVV
Sbjct: 93  FHVDPTGDGSSFLQLHRLAVE-GTRRLLAACCRSGVRTVVYTGSADVVV 140


>02_05_0640 - 30558523-30559027,30559123-30559252,30559388-30559868,
            30560292-30560346,30560537-30560613,30561228-30561315,
            30561490-30561593,30562050-30562231,30562347-30563109,
            30563195-30563438,30564513-30564658,30565158-30565283,
            30565404-30565517,30565595-30565762,30566283-30566528,
            30566605-30566767,30566970-30567064,30567274-30567357,
            30567769-30568055,30568359-30568572,30568923-30569140,
            30569386-30569623,30570312-30571118,30571202-30571301,
            30571694-30571737,30571824-30571973
          Length = 1942

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 20/65 (30%), Positives = 30/65 (46%)
 Frame = -2

Query: 247  PPFDTVLYDNIRTVLKDNKTALLSASIQASLPSSEIYRQLVDPRHVSSDSFGVYVKS*SL 68
            P F T+LY     ++KD      S+     L S+  Y  L+DP   S D+    + +   
Sbjct: 1349 PEFHTLLYAEAARIIKDCWWLADSSRPVKELDSAVGYA-LLDPTWASQDNTSTAIGNIVA 1407

Query: 67   ILHSF 53
            +LHSF
Sbjct: 1408 LLHSF 1412


>02_02_0718 -
           13290764-13290897,13292375-13293041,13293364-13293719,
           13294559-13294629,13295326-13295336
          Length = 412

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = -2

Query: 448 IPRILRSPPPTHPLIEDVVMATNQAIIDYK 359
           +P++L+SPP T+  IED    +  + ID K
Sbjct: 382 LPQLLQSPPETYHAIEDGHNPSKTSFIDMK 411


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,481,119
Number of Sequences: 37544
Number of extensions: 420621
Number of successful extensions: 1096
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1064
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1095
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2138915688
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)