Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP11_T7_E22
(1007 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0686 - 30900748-30902167,30903442-30904742 34 0.16
07_03_0792 - 21541301-21542143,21542426-21542661,21543177-215433... 32 0.63
07_03_1691 - 28726307-28726323,28726588-28726953,28727483-287275... 31 1.1
02_04_0382 - 22501041-22501279,22501717-22501810 31 1.1
12_02_1174 - 26696869-26698191 29 4.4
04_04_1699 + 35462160-35462555,35463114-35463196,35463317-354633... 29 4.4
01_01_0796 + 6190931-6192745 25 5.1
07_03_1140 - 24258627-24258849,24259967-24260089,24260200-242609... 29 5.9
03_02_0455 - 8630543-8630893,8630994-8631068,8631149-8631223,863... 29 5.9
09_01_0016 - 376742-376883,377973-378964 25 6.9
03_05_1096 - 30364144-30365310,30365825-30365971,30366087-303663... 25 7.3
12_01_0033 - 272848-272943,274026-274169,274264-274375,274521-27... 29 7.8
11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-25... 29 7.8
09_04_0740 + 19850745-19851254 29 7.8
07_01_0862 - 7172083-7172931 29 7.8
06_03_1274 + 28897491-28897707,28897804-28897935,28898029-288980... 29 7.8
04_04_1182 + 31531426-31531702,31533741-31533997,31534672-315348... 29 7.8
01_01_0800 - 6221306-6223016,6223418-6223443,6223653-6223664 29 7.8
01_01_0892 + 7037384-7037795,7038447-7038962,7039507-7039593,703... 24 8.6
03_03_0038 + 13984525-13984917,13985351-13985429,13985535-139856... 24 9.4
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 34.3 bits (75), Expect = 0.16
Identities = 23/68 (33%), Positives = 24/68 (35%)
Frame = +3
Query: 423 PPXXKNFFSPRGXNXXXXPPXKKKXPPGGXXPXKXFXXXXXXXPPQKKKXGXGXPPPPPP 602
PP K P PP K PP P PP KK G PPPPPP
Sbjct: 329 PPPPKAAPPPPPPKGPPPPPPAKGPPP---PPPPKGPSPPPPPPPGGKKGG---PPPPPP 382
Query: 603 XXGGXKTP 626
G + P
Sbjct: 383 KGGASRPP 390
>07_03_0792 -
21541301-21542143,21542426-21542661,21543177-21543373,
21543459-21544173,21544250-21544892,21545970-21546139,
21546442-21546943
Length = 1101
Score = 32.3 bits (70), Expect = 0.63
Identities = 21/68 (30%), Positives = 21/68 (30%), Gaps = 1/68 (1%)
Frame = +3
Query: 423 PPXXKNFFSPRGXNXXXXPPXKKKXPPGGXXPXKXFXXXXXXXPPQKKKXGXGXP-PPPP 599
PP SP P PP P PP K G G P PPPP
Sbjct: 560 PPPIPKLLSPPAPQAPMPPLKASPVPPPEPSPPPA--PKAAPPPPPPKSTGPGPPRPPPP 617
Query: 600 PXXGGXKT 623
G KT
Sbjct: 618 AMPGSSKT 625
>07_03_1691 -
28726307-28726323,28726588-28726953,28727483-28727567,
28728255-28728387,28729793-28730328
Length = 378
Score = 31.5 bits (68), Expect = 1.1
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +3
Query: 783 GGGGGXGXXPPPPP 824
GGGGG G PPPPP
Sbjct: 35 GGGGGAGPTPPPPP 48
Score = 28.7 bits (61), Expect = 7.8
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -1
Query: 824 GGGGGXXPXPPXPP 783
GGGGG P PP PP
Sbjct: 35 GGGGGAGPTPPPPP 48
Score = 28.7 bits (61), Expect = 7.8
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +1
Query: 784 GGXGGXGXXPPPPP 825
GG GG G PPPPP
Sbjct: 35 GGGGGAGPTPPPPP 48
>02_04_0382 - 22501041-22501279,22501717-22501810
Length = 110
Score = 31.5 bits (68), Expect = 1.1
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +3
Query: 783 GGGGGXGXXPPPPP 824
GGGGG G PPPPP
Sbjct: 90 GGGGGYGKPPPPPP 103
Score = 28.7 bits (61), Expect = 7.8
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +1
Query: 784 GGXGGXGXXPPPPP 825
GG GG G PPPPP
Sbjct: 90 GGGGGYGKPPPPPP 103
>12_02_1174 - 26696869-26698191
Length = 440
Score = 29.5 bits (63), Expect = 4.4
Identities = 17/60 (28%), Positives = 20/60 (33%)
Frame = +3
Query: 423 PPXXKNFFSPRGXNXXXXPPXKKKXPPGGXXPXKXFXXXXXXXPPQKKKXGXGXPPPPPP 602
PP PR PP PP P + + PP+ K P PPPP
Sbjct: 249 PPPRAPVKMPRVLEPKPSPPPPSPLPP----PPEDYWSPTAVTPPEPTKPKPPPPSPPPP 304
>04_04_1699 +
35462160-35462555,35463114-35463196,35463317-35463378,
35463745-35463806,35463932-35463991,35464079-35464111,
35464196-35464261,35464349-35464393
Length = 268
Score = 29.5 bits (63), Expect = 4.4
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +3
Query: 477 PPXKKKXPPGGXXPXKXFXXXXXXXPPQKKKXGXGXPPPPPP 602
PP ++ PP G + PP+K+ G PPPPPP
Sbjct: 29 PPRQR--PPPGPTKHRRLRHDADAQPPRKR----GHPPPPPP 64
>01_01_0796 + 6190931-6192745
Length = 604
Score = 25.0 bits (52), Expect(2) = 5.1
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +3
Query: 585 PPPPPPXXGG 614
PPPPPP GG
Sbjct: 238 PPPPPPAAGG 247
Score = 22.6 bits (46), Expect(2) = 5.1
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +3
Query: 573 GXGXPPPPPP 602
G PPPPPP
Sbjct: 189 GSSVPPPPPP 198
>07_03_1140 -
24258627-24258849,24259967-24260089,24260200-24260921,
24260945-24261073,24261484-24261714
Length = 475
Score = 29.1 bits (62), Expect = 5.9
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +3
Query: 786 GGGGXGXXPPPPP 824
GGGG G PPPPP
Sbjct: 53 GGGGGGWPPPPPP 65
>03_02_0455 -
8630543-8630893,8630994-8631068,8631149-8631223,
8631332-8631397,8631891-8631967,8632659-8633070
Length = 351
Score = 29.1 bits (62), Expect = 5.9
Identities = 17/58 (29%), Positives = 19/58 (32%), Gaps = 3/58 (5%)
Frame = +3
Query: 450 PRGXNXXXXPPXKKKXPPGGXXPXKXFXXXXXXXPPQ---KKKXGXGXPPPPPPXXGG 614
P G PP + PP P PP+ G PPPPPP G
Sbjct: 258 PNGSGGPPRPPPPQVPPPPPQAPPPPPPNAPMGMPPRIPPPPVGGTQPPPPPPPLANG 315
>09_01_0016 - 376742-376883,377973-378964
Length = 377
Score = 24.6 bits (51), Expect(2) = 6.9
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = +3
Query: 555 PQKKKXGXGXPPPPPP 602
P KK PPPPPP
Sbjct: 51 PTKKAPFVAPPPPPPP 66
Score = 22.6 bits (46), Expect(2) = 6.9
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +3
Query: 585 PPPPPPXXGG 614
PPPPPP G
Sbjct: 65 PPPPPPQQNG 74
>03_05_1096 -
30364144-30365310,30365825-30365971,30366087-30366393,
30366541-30366849,30367544-30370567,30370640-30372290,
30372373-30373463,30373544-30373646,30373737-30374439,
30374654-30375783,30375913-30376027,30376504-30376695,
30377443-30377616,30378438-30378494,30378581-30378716,
30378842-30378927,30379023-30379092,30379993-30380021,
30380444-30380456,30380762-30381006
Length = 3582
Score = 25.4 bits (53), Expect(2) = 7.3
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +3
Query: 585 PPPPPPXXGGXKTP 626
PPPPPP G +P
Sbjct: 22 PPPPPPPPGSSSSP 35
Score = 21.4 bits (43), Expect(2) = 7.3
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +3
Query: 558 QKKKXGXGXPPPPPP 602
Q+++ PPPPPP
Sbjct: 15 QQEQEQPPPPPPPPP 29
>12_01_0033 -
272848-272943,274026-274169,274264-274375,274521-274702,
274781-274912,275038-276330,279841-280545,280649-280695,
280787-280865
Length = 929
Score = 28.7 bits (61), Expect = 7.8
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = +3
Query: 552 PPQKKKXGXGXPPPPPPXXGGXKTP 626
PP + G PPPPP GG P
Sbjct: 615 PPPPRPPGAPPPPPPPGKPGGPPPP 639
>11_01_0035 -
256087-256185,256287-256430,256521-256632,256777-256958,
257038-257169,257297-258589,259133-259837,260465-260549,
260604-260650,260810-260900,261838-262101,262195-262309,
262455-262570,262713-262847,262969-263036,263292-263411
Length = 1235
Score = 28.7 bits (61), Expect = 7.8
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = +3
Query: 552 PPQKKKXGXGXPPPPPPXXGGXKTP 626
PP + G PPPPP GG P
Sbjct: 920 PPPPRPPGAPPPPPPPGKPGGPPPP 944
>09_04_0740 + 19850745-19851254
Length = 169
Score = 28.7 bits (61), Expect = 7.8
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +3
Query: 768 KKKXXGGGGGXGXXPPPP 821
KK+ GGGGG G PP P
Sbjct: 4 KKENPGGGGGGGPAPPRP 21
>07_01_0862 - 7172083-7172931
Length = 282
Score = 28.7 bits (61), Expect = 7.8
Identities = 18/51 (35%), Positives = 19/51 (37%), Gaps = 1/51 (1%)
Frame = +3
Query: 477 PPXKKKXP-PGGXXPXKXFXXXXXXXPPQKKKXGXGXPPPPPPXXGGXKTP 626
PP KK P P K PP+KK PPP PP TP
Sbjct: 151 PPRKKAMLFPLPLPPRKKPLLYPPPLPPKKKPLPPPSPPPQPPLPEKENTP 201
>06_03_1274 +
28897491-28897707,28897804-28897935,28898029-28898096,
28898216-28898280,28898468-28898534,28898630-28898917,
28898995-28899102,28899236-28899487,28899918-28899997,
28900092-28900185,28900728-28900810,28901319-28901873,
28902085-28902616
Length = 846
Score = 28.7 bits (61), Expect = 7.8
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +3
Query: 783 GGGGGXGXXPPPP 821
GGGGG G PPPP
Sbjct: 35 GGGGGGGAVPPPP 47
>04_04_1182 +
31531426-31531702,31533741-31533997,31534672-31534818,
31535974-31536111
Length = 272
Score = 28.7 bits (61), Expect = 7.8
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +3
Query: 783 GGGGGXGXXPPPPPXXXK 836
GGGGG G P PPP K
Sbjct: 55 GGGGGMGIPPRPPPPEIK 72
>01_01_0800 - 6221306-6223016,6223418-6223443,6223653-6223664
Length = 582
Score = 28.7 bits (61), Expect = 7.8
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +3
Query: 783 GGGGGXGXXPPPP 821
GGGGG G PPPP
Sbjct: 561 GGGGGNGDKPPPP 573
>01_01_0892 +
7037384-7037795,7038447-7038962,7039507-7039593,
7039698-7039768,7040148-7040224,7040380-7040527,
7040973-7041134,7041374-7041694
Length = 597
Score = 24.2 bits (50), Expect(2) = 8.6
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +3
Query: 552 PPQKKKXGXGXPPPPPP 602
PP G PPPPPP
Sbjct: 115 PPPHLLHYYGHPPPPPP 131
Score = 22.6 bits (46), Expect(2) = 8.6
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +3
Query: 585 PPPPPPXXG 611
PPPPPP G
Sbjct: 130 PPPPPPFKG 138
>03_03_0038 +
13984525-13984917,13985351-13985429,13985535-13985628,
13985712-13985844
Length = 232
Score = 23.8 bits (49), Expect(2) = 9.4
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +3
Query: 585 PPPPPPXXGGXKT 623
PPPPPP G +T
Sbjct: 39 PPPPPPQLRGGET 51
Score = 23.0 bits (47), Expect(2) = 9.4
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +3
Query: 567 KXGXGXPPPPPP 602
+ G PPPPPP
Sbjct: 32 RRGEAKPPPPPP 43
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,081,144
Number of Sequences: 37544
Number of extensions: 274440
Number of successful extensions: 4190
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1575
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3563
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2963829220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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