Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP11_T7_E22
(1007 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 34 0.18
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 34 0.18
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 33 0.32
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 33 0.32
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 33 0.32
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 33 0.32
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 33 0.32
U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astaci... 32 0.56
Z81088-5|CAB03133.1| 215|Caenorhabditis elegans Hypothetical pr... 31 0.98
Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical pr... 31 0.98
X74838-1|CAA52832.1| 231|Caenorhabditis elegans cuticlin 2 prot... 31 0.98
U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical pr... 31 0.98
AF016446-2|AAC24165.1| 70|Caenorhabditis elegans Hypothetical ... 31 0.98
AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical ... 31 0.98
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 31 0.98
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 30 2.3
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 26 2.4
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 25 3.7
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 29 4.0
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 29 4.0
Z77662-15|CAI79240.1| 255|Caenorhabditis elegans Hypothetical p... 29 5.2
AL117203-5|CAB55107.1| 291|Caenorhabditis elegans Hypothetical ... 29 5.2
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 29 5.2
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 29 5.2
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 29 5.2
AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical ... 29 5.2
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 26 5.6
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 6.9
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 6.9
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 6.9
AF068713-12|AAC17802.1| 139|Caenorhabditis elegans Ground-like ... 28 9.2
AF038615-6|AAB94146.1| 157|Caenorhabditis elegans Ground-like (... 28 9.2
AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical... 28 9.2
AC006636-3|AAF39799.1| 139|Caenorhabditis elegans Ground-like (... 28 9.2
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 33.9 bits (74), Expect = 0.18
Identities = 20/60 (33%), Positives = 22/60 (36%)
Frame = +3
Query: 423 PPXXKNFFSPRGXNXXXXPPXKKKXPPGGXXPXKXFXXXXXXXPPQKKKXGXGXPPPPPP 602
PP + F P G PP PGG P PP+ G G PPPPP
Sbjct: 318 PPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPP---------PPRYPSAGPGMYPPPPP 368
Score = 28.3 bits (60), Expect = 9.2
Identities = 19/61 (31%), Positives = 22/61 (36%), Gaps = 1/61 (1%)
Frame = +3
Query: 423 PPXXKNFFSPRGXNXXXXPPXKKKXPPG-GXXPXKXFXXXXXXXPPQKKKXGXGXPPPPP 599
PP + P PP + PPG G P PP + G PPPPP
Sbjct: 302 PPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPP---------PPPGMRYPGGMPPPPP 352
Query: 600 P 602
P
Sbjct: 353 P 353
Score = 25.8 bits (54), Expect(2) = 1.7
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +3
Query: 552 PPQKKKXGXGXPPPPPP 602
PP G PPPPPP
Sbjct: 287 PPPPPSSGMWPPPPPPP 303
Score = 23.4 bits (48), Expect(2) = 1.7
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +3
Query: 579 GXPPPPPPXXGG 614
G PPPPPP G
Sbjct: 315 GMPPPPPPSRFG 326
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 33.9 bits (74), Expect = 0.18
Identities = 20/60 (33%), Positives = 22/60 (36%)
Frame = +3
Query: 423 PPXXKNFFSPRGXNXXXXPPXKKKXPPGGXXPXKXFXXXXXXXPPQKKKXGXGXPPPPPP 602
PP + F P G PP PGG P PP+ G G PPPPP
Sbjct: 328 PPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPP---------PPRYPSAGPGMYPPPPP 378
Score = 28.3 bits (60), Expect = 9.2
Identities = 19/61 (31%), Positives = 22/61 (36%), Gaps = 1/61 (1%)
Frame = +3
Query: 423 PPXXKNFFSPRGXNXXXXPPXKKKXPPG-GXXPXKXFXXXXXXXPPQKKKXGXGXPPPPP 599
PP + P PP + PPG G P PP + G PPPPP
Sbjct: 312 PPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPP---------PPPGMRYPGGMPPPPP 362
Query: 600 P 602
P
Sbjct: 363 P 363
Score = 25.8 bits (54), Expect(2) = 1.7
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +3
Query: 552 PPQKKKXGXGXPPPPPP 602
PP G PPPPPP
Sbjct: 297 PPPPPSSGMWPPPPPPP 313
Score = 23.4 bits (48), Expect(2) = 1.7
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +3
Query: 579 GXPPPPPPXXGG 614
G PPPPPP G
Sbjct: 325 GMPPPPPPSRFG 336
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 33.1 bits (72), Expect = 0.32
Identities = 17/41 (41%), Positives = 17/41 (41%)
Frame = +3
Query: 498 PPGGXXPXKXFXXXXXXXPPQKKKXGXGXPPPPPPXXGGXK 620
PPGG P PP G PPPPPP GG K
Sbjct: 747 PPGGLPPISG------GPPPPPPPPGGCPPPPPPPPPGGFK 781
Score = 32.7 bits (71), Expect = 0.43
Identities = 17/43 (39%), Positives = 17/43 (39%)
Frame = +3
Query: 498 PPGGXXPXKXFXXXXXXXPPQKKKXGXGXPPPPPPXXGGXKTP 626
PPGG P PP G PPPPPP GG P
Sbjct: 731 PPGGLPPITG--GPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 771
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 33.1 bits (72), Expect = 0.32
Identities = 17/41 (41%), Positives = 17/41 (41%)
Frame = +3
Query: 498 PPGGXXPXKXFXXXXXXXPPQKKKXGXGXPPPPPPXXGGXK 620
PPGG P PP G PPPPPP GG K
Sbjct: 747 PPGGLPPISG------GPPPPPPPPGGCPPPPPPPPPGGFK 781
Score = 32.7 bits (71), Expect = 0.43
Identities = 17/43 (39%), Positives = 17/43 (39%)
Frame = +3
Query: 498 PPGGXXPXKXFXXXXXXXPPQKKKXGXGXPPPPPPXXGGXKTP 626
PPGG P PP G PPPPPP GG P
Sbjct: 731 PPGGLPPITG--GPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 771
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 33.1 bits (72), Expect = 0.32
Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 4/46 (8%)
Frame = +3
Query: 477 PPXKKKXPPGGXXPXKXFXXXXXXX----PPQKKKXGXGXPPPPPP 602
PP + PPGG P + PP +++ G G PPPP P
Sbjct: 695 PPGQPYGPPGGYPPQQQRPPYQAQPYPGPPPPQQQRGYGYPPPPQP 740
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 33.1 bits (72), Expect = 0.32
Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 4/46 (8%)
Frame = +3
Query: 477 PPXKKKXPPGGXXPXKXFXXXXXXX----PPQKKKXGXGXPPPPPP 602
PP + PPGG P + PP +++ G G PPPP P
Sbjct: 695 PPGQPYGPPGGYPPQQQRPPYQAQPYPGPPPPQQQRGYGYPPPPQP 740
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 33.1 bits (72), Expect = 0.32
Identities = 17/41 (41%), Positives = 17/41 (41%)
Frame = +3
Query: 498 PPGGXXPXKXFXXXXXXXPPQKKKXGXGXPPPPPPXXGGXK 620
PPGG P PP G PPPPPP GG K
Sbjct: 330 PPGGLPPISG------GPPPPPPPPGGCPPPPPPPPPGGFK 364
Score = 32.7 bits (71), Expect = 0.43
Identities = 17/43 (39%), Positives = 17/43 (39%)
Frame = +3
Query: 498 PPGGXXPXKXFXXXXXXXPPQKKKXGXGXPPPPPPXXGGXKTP 626
PPGG P PP G PPPPPP GG P
Sbjct: 314 PPGGLPPITG--GPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 354
>U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astacin
protease protein33 protein.
Length = 644
Score = 32.3 bits (70), Expect = 0.56
Identities = 18/62 (29%), Positives = 23/62 (37%), Gaps = 3/62 (4%)
Frame = +3
Query: 426 PXXKNFFSPRGXNXXXXPPX---KKKXPPGGXXPXKXFXXXXXXXPPQKKKXGXGXPPPP 596
P ++F P PP + PP G P PP ++ G PPPP
Sbjct: 24 PPPPDWFFPGPLRPWGPPPPWHRNRGPPPFGPPPPWDRPPPPWRRPPWHRRPPWGLPPPP 83
Query: 597 PP 602
PP
Sbjct: 84 PP 85
>Z81088-5|CAB03133.1| 215|Caenorhabditis elegans Hypothetical
protein F53F1.5 protein.
Length = 215
Score = 31.5 bits (68), Expect = 0.98
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +3
Query: 783 GGGGGXGXXPPPPP 824
GGGGG G PPPPP
Sbjct: 22 GGGGGCGCAPPPPP 35
Score = 28.7 bits (61), Expect = 6.9
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +1
Query: 784 GGXGGXGXXPPPPP 825
GG GG G PPPPP
Sbjct: 22 GGGGGCGCAPPPPP 35
>Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical
protein F53F1.4 protein.
Length = 105
Score = 31.5 bits (68), Expect = 0.98
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +3
Query: 783 GGGGGXGXXPPPPP 824
GGGGG G PPPPP
Sbjct: 22 GGGGGCGCAPPPPP 35
Score = 28.7 bits (61), Expect = 6.9
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +1
Query: 784 GGXGGXGXXPPPPP 825
GG GG G PPPPP
Sbjct: 22 GGGGGCGCAPPPPP 35
>X74838-1|CAA52832.1| 231|Caenorhabditis elegans cuticlin 2
protein.
Length = 231
Score = 31.5 bits (68), Expect = 0.98
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +3
Query: 783 GGGGGXGXXPPPPP 824
GGGGG G PPPPP
Sbjct: 22 GGGGGCGCAPPPPP 35
Score = 28.7 bits (61), Expect = 6.9
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +1
Query: 784 GGXGGXGXXPPPPP 825
GG GG G PPPPP
Sbjct: 22 GGGGGCGCAPPPPP 35
>U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical
protein F41F3.3 protein.
Length = 156
Score = 31.5 bits (68), Expect = 0.98
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +3
Query: 783 GGGGGXGXXPPPPP 824
GGGGG G PPPPP
Sbjct: 22 GGGGGCGCAPPPPP 35
Score = 28.7 bits (61), Expect = 6.9
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +1
Query: 784 GGXGGXGXXPPPPP 825
GG GG G PPPPP
Sbjct: 22 GGGGGCGCAPPPPP 35
>AF016446-2|AAC24165.1| 70|Caenorhabditis elegans Hypothetical
protein C02E7.6 protein.
Length = 70
Score = 31.5 bits (68), Expect = 0.98
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +3
Query: 783 GGGGGXGXXPPPPP 824
GGGGG G PPPPP
Sbjct: 22 GGGGGCGCAPPPPP 35
Score = 28.7 bits (61), Expect = 6.9
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +1
Query: 784 GGXGGXGXXPPPPP 825
GG GG G PPPPP
Sbjct: 22 GGGGGCGCAPPPPP 35
>AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical
protein C02E7.7 protein.
Length = 66
Score = 31.5 bits (68), Expect = 0.98
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +3
Query: 783 GGGGGXGXXPPPPP 824
GGGGG G PPPPP
Sbjct: 22 GGGGGCGCAPPPPP 35
Score = 28.7 bits (61), Expect = 6.9
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +1
Query: 784 GGXGGXGXXPPPPP 825
GG GG G PPPPP
Sbjct: 22 GGGGGCGCAPPPPP 35
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 31.5 bits (68), Expect = 0.98
Identities = 21/68 (30%), Positives = 22/68 (32%)
Frame = +3
Query: 423 PPXXKNFFSPRGXNXXXXPPXKKKXPPGGXXPXKXFXXXXXXXPPQKKKXGXGXPPPPPP 602
PP + G N PP PP P PP G PPPPPP
Sbjct: 544 PPPIAGLLAANGTNVPIPPP-----PP----PPLPQNLSGAPPPPPPPPPMLGGPPPPPP 594
Query: 603 XXGGXKTP 626
GG P
Sbjct: 595 PPGGLMGP 602
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 31.1 bits (67), Expect = 1.3
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +3
Query: 552 PPQKKKXGXGXPPPPPP 602
PP+K + G PPPPPP
Sbjct: 127 PPRKSRAGGSSPPPPPP 143
Score = 29.5 bits (63), Expect = 4.0
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +3
Query: 552 PPQKKKXGXGXPPPPPPXXGGXKTP 626
PP +K G PPPPP +TP
Sbjct: 126 PPPRKSRAGGSSPPPPPPPRVPRTP 150
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 30.3 bits (65), Expect = 2.3
Identities = 20/63 (31%), Positives = 20/63 (31%)
Frame = +3
Query: 423 PPXXKNFFSPRGXNXXXXPPXKKKXPPGGXXPXKXFXXXXXXXPPQKKKXGXGXPPPPPP 602
PP N F P PP GG P PP G PPPPPP
Sbjct: 66 PPPVPNGFIPPPPGPGGIPPPPPMFA-GGIPPPPPMMGGIPPPPPM-----FGAPPPPPP 119
Query: 603 XXG 611
G
Sbjct: 120 PSG 122
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 26.2 bits (55), Expect(2) = 2.4
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +3
Query: 552 PPQKKKXGXGXPPPPPP 602
PP G PPPPPP
Sbjct: 41 PPPPPMCGCAPPPPPPP 57
Score = 22.6 bits (46), Expect(2) = 2.4
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +3
Query: 585 PPPPPPXXG 611
PPPPPP G
Sbjct: 55 PPPPPPMCG 63
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 25.0 bits (52), Expect(2) = 3.7
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +3
Query: 498 PPGGXXPXKXFXXXXXXXPPQKKKXGXGXPPPPP 599
PP G PP K G G PPPPP
Sbjct: 171 PPTGEPQDLSTEGNASRRPPPPPK-GTGTPPPPP 203
Score = 23.0 bits (47), Expect(2) = 3.7
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +3
Query: 588 PPPPPXXGGXKTP 626
PPPPP G TP
Sbjct: 220 PPPPPKGTGSPTP 232
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 29.5 bits (63), Expect = 4.0
Identities = 18/62 (29%), Positives = 20/62 (32%), Gaps = 3/62 (4%)
Frame = +3
Query: 426 PXXKNFFSPRGXNXXXXPPXKKKXPPG-GXXPXKXFXXXXXXXPPQK--KKXGXGXPPPP 596
P N+ +P PP P G P PP G G PPPP
Sbjct: 593 PQAPNYGTPENRPHAVPPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPP 652
Query: 597 PP 602
PP
Sbjct: 653 PP 654
Score = 28.7 bits (61), Expect = 6.9
Identities = 18/78 (23%), Positives = 22/78 (28%), Gaps = 2/78 (2%)
Frame = +3
Query: 375 FPKNFPX*KXGXXKKTP--PXXKNFFSPRGXNXXXXPPXKKKXPPGGXXPXKXFXXXXXX 548
FP + P TP P G PP G P +
Sbjct: 539 FPSSAPIGSGASSYSTPAAPPPPTRVESHGLAPARPPPPPPSSGTRGIAPSRPLPQAPNY 598
Query: 549 XPPQKKKXGXGXPPPPPP 602
P+ + PPPPPP
Sbjct: 599 GTPENRPHAVPPPPPPPP 616
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 29.5 bits (63), Expect = 4.0
Identities = 18/62 (29%), Positives = 20/62 (32%), Gaps = 3/62 (4%)
Frame = +3
Query: 426 PXXKNFFSPRGXNXXXXPPXKKKXPPG-GXXPXKXFXXXXXXXPPQK--KKXGXGXPPPP 596
P N+ +P PP P G P PP G G PPPP
Sbjct: 419 PQAPNYGTPENRPHAVPPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPP 478
Query: 597 PP 602
PP
Sbjct: 479 PP 480
Score = 28.7 bits (61), Expect = 6.9
Identities = 18/78 (23%), Positives = 22/78 (28%), Gaps = 2/78 (2%)
Frame = +3
Query: 375 FPKNFPX*KXGXXKKTP--PXXKNFFSPRGXNXXXXPPXKKKXPPGGXXPXKXFXXXXXX 548
FP + P TP P G PP G P +
Sbjct: 365 FPSSAPIGSGASSYSTPAAPPPPTRVESHGLAPARPPPPPPSSGTRGIAPSRPLPQAPNY 424
Query: 549 XPPQKKKXGXGXPPPPPP 602
P+ + PPPPPP
Sbjct: 425 GTPENRPHAVPPPPPPPP 442
>Z77662-15|CAI79240.1| 255|Caenorhabditis elegans Hypothetical
protein F47B8.14 protein.
Length = 255
Score = 29.1 bits (62), Expect = 5.2
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +3
Query: 783 GGGGGXGXXPPPPP 824
GGGGG PPPPP
Sbjct: 33 GGGGGDAAPPPPPP 46
Score = 28.7 bits (61), Expect = 6.9
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +3
Query: 783 GGGGGXGXXPPPPP 824
GGGGG PPPPP
Sbjct: 32 GGGGGGDAAPPPPP 45
Score = 28.3 bits (60), Expect = 9.2
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +3
Query: 783 GGGGGXGXXPPPPP 824
GGGGG G PPPP
Sbjct: 31 GGGGGGGDAAPPPP 44
>AL117203-5|CAB55107.1| 291|Caenorhabditis elegans Hypothetical
protein Y48C3A.8 protein.
Length = 291
Score = 29.1 bits (62), Expect = 5.2
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +3
Query: 786 GGGGXGXXPPPPP 824
GGGG G PPPPP
Sbjct: 159 GGGGGGSVPPPPP 171
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 29.1 bits (62), Expect = 5.2
Identities = 18/51 (35%), Positives = 18/51 (35%)
Frame = +3
Query: 450 PRGXNXXXXPPXKKKXPPGGXXPXKXFXXXXXXXPPQKKKXGXGXPPPPPP 602
P N PP P GG P PP G G PPPPPP
Sbjct: 206 PLTSNIPQAPPAPPP-PIGGIAPVNAHGAPP---PPPLPPVGAGAPPPPPP 252
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 29.1 bits (62), Expect = 5.2
Identities = 18/51 (35%), Positives = 18/51 (35%)
Frame = +3
Query: 450 PRGXNXXXXPPXKKKXPPGGXXPXKXFXXXXXXXPPQKKKXGXGXPPPPPP 602
P N PP P GG P PP G G PPPPPP
Sbjct: 192 PLTSNIPQAPPAPPP-PIGGIAPVNAHGAPP---PPPLPPVGAGAPPPPPP 238
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 29.1 bits (62), Expect = 5.2
Identities = 18/51 (35%), Positives = 18/51 (35%)
Frame = +3
Query: 450 PRGXNXXXXPPXKKKXPPGGXXPXKXFXXXXXXXPPQKKKXGXGXPPPPPP 602
P N PP P GG P PP G G PPPPPP
Sbjct: 192 PLTSNIPQAPPAPPP-PIGGIAPVNAHGAPP---PPPLPPVGAGAPPPPPP 238
>AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical
protein Y53G8AR.9 protein.
Length = 315
Score = 29.1 bits (62), Expect = 5.2
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +3
Query: 783 GGGGGXGXXPPPPP 824
G GGG G PPPPP
Sbjct: 203 GSGGGSGRFPPPPP 216
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 25.8 bits (54), Expect(2) = 5.6
Identities = 21/83 (25%), Positives = 22/83 (26%)
Frame = +3
Query: 354 LXKTRGXFPKNFPX*KXGXXKKTPPXXKNFFSPRGXNXXXXPPXKKKXPPGGXXPXKXFX 533
L T P P PP +P N PP P P
Sbjct: 482 LINTNAPPPPPMPSINGHAPNPPPPPPLLGIAPMSTNAPPPPPMPGMAPLSTGAPTPP-- 539
Query: 534 XXXXXXPPQKKKXGXGXPPPPPP 602
PP G PPPPPP
Sbjct: 540 ------PPPPVGMANGGPPPPPP 556
Score = 21.4 bits (43), Expect(2) = 5.6
Identities = 8/17 (47%), Positives = 8/17 (47%)
Frame = +3
Query: 585 PPPPPPXXGGXKTPXFF 635
PPPPP K P F
Sbjct: 581 PPPPPSFMFNGKVPNAF 597
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 28.7 bits (61), Expect = 6.9
Identities = 23/86 (26%), Positives = 26/86 (30%), Gaps = 3/86 (3%)
Frame = +3
Query: 378 PKNFPX*KXGXXKKTPPXXKNFFSPRGXNXXXXPPXKKKXPPGGXXPXKXFXXXXXXXPP 557
PK P PP + PR + P PP G P PP
Sbjct: 243 PKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPP 302
Query: 558 QKKKXGXGXPPP---PPPXXGGXKTP 626
+ G PP PPP GG P
Sbjct: 303 PR-----GSPPTGSLPPPQAGGSPPP 323
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 28.7 bits (61), Expect = 6.9
Identities = 23/86 (26%), Positives = 26/86 (30%), Gaps = 3/86 (3%)
Frame = +3
Query: 378 PKNFPX*KXGXXKKTPPXXKNFFSPRGXNXXXXPPXKKKXPPGGXXPXKXFXXXXXXXPP 557
PK P PP + PR + P PP G P PP
Sbjct: 264 PKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPP 323
Query: 558 QKKKXGXGXPPP---PPPXXGGXKTP 626
+ G PP PPP GG P
Sbjct: 324 PR-----GSPPTGSLPPPQAGGSPPP 344
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 28.7 bits (61), Expect = 6.9
Identities = 23/86 (26%), Positives = 26/86 (30%), Gaps = 3/86 (3%)
Frame = +3
Query: 378 PKNFPX*KXGXXKKTPPXXKNFFSPRGXNXXXXPPXKKKXPPGGXXPXKXFXXXXXXXPP 557
PK P PP + PR + P PP G P PP
Sbjct: 249 PKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPP 308
Query: 558 QKKKXGXGXPPP---PPPXXGGXKTP 626
+ G PP PPP GG P
Sbjct: 309 PR-----GSPPTGSLPPPQAGGSPPP 329
>AF068713-12|AAC17802.1| 139|Caenorhabditis elegans Ground-like
(grd related) protein28 protein.
Length = 139
Score = 28.3 bits (60), Expect = 9.2
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +3
Query: 783 GGGGGXGXXPPPPP 824
GGGGG G PPPP
Sbjct: 26 GGGGGCGCGAPPPP 39
>AF038615-6|AAB94146.1| 157|Caenorhabditis elegans Ground-like (grd
related) protein19 protein.
Length = 157
Score = 28.3 bits (60), Expect = 9.2
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +3
Query: 783 GGGGGXGXXPPPPP 824
GGGGG G PPPP
Sbjct: 35 GGGGGGGCCAPPPP 48
>AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical
protein Y48G8AL.12 protein.
Length = 78
Score = 28.3 bits (60), Expect = 9.2
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +3
Query: 783 GGGGGXGXXPPPPP 824
GGGGG G PPPP
Sbjct: 24 GGGGGCGCGAPPPP 37
>AC006636-3|AAF39799.1| 139|Caenorhabditis elegans Ground-like (grd
related) protein27 protein.
Length = 139
Score = 28.3 bits (60), Expect = 9.2
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +3
Query: 783 GGGGGXGXXPPPPP 824
GGGGG G PPPP
Sbjct: 25 GGGGGCGCGAPPPP 38
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,927,083
Number of Sequences: 27780
Number of extensions: 181537
Number of successful extensions: 1757
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 498
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1386
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2646946214
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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