Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP11_T7_E09
(784 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT011339-1|AAR96131.1| 465|Drosophila melanogaster RH62603p pro... 326 2e-89
AF016835-1|AAC26144.1| 416|Drosophila melanogaster ribosomal pr... 326 2e-89
AE014297-1265|AAF54609.1| 403|Drosophila melanogaster CG4863-PE... 326 2e-89
AE014297-1264|AAN13496.1| 403|Drosophila melanogaster CG4863-PB... 326 2e-89
AE014297-1262|AAF54610.2| 416|Drosophila melanogaster CG4863-PA... 326 2e-89
>BT011339-1|AAR96131.1| 465|Drosophila melanogaster RH62603p
protein.
Length = 465
Score = 326 bits (801), Expect = 2e-89
Identities = 155/199 (77%), Positives = 171/199 (85%)
Frame = -3
Query: 689 EPIPVDSVFAQDEMIDCIGVTQGAKDTKVSLLVGTQRSYPVRHTKGLRKVACIGAWHPSR 510
+PI V +VF QDEMIDC+GVT+G V+ T++ P + KGLRKVACIGAWHPSR
Sbjct: 214 KPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKK-LPRKTHKGLRKVACIGAWHPSR 272
Query: 509 VSFTVARAGQKGYHHRTEMXKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFP 330
VS TVARAGQKGYHHRTE+ KKIYRIG GIH KDGKVIKNNASTEYDL++KSITPMGGFP
Sbjct: 273 VSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGKVIKNNASTEYDLTDKSITPMGGFP 332
Query: 329 HYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQT 150
HYGEVNNDFVMIKGCC+G KKRIITLRKSL HTKR+ALE+I LKFIDTSSK GHGRFQT
Sbjct: 333 HYGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHTKRSALEQIKLKFIDTSSKMGHGRFQT 392
Query: 149 PADKAAFMGTLKKDRIREE 93
PADK AFMG LKKDR++EE
Sbjct: 393 PADKLAFMGPLKKDRLKEE 411
Score = 62.1 bits (144), Expect = 8e-10
Identities = 25/32 (78%), Positives = 29/32 (90%)
Frame = -1
Query: 784 VKQRQKRVHIMEIQXNGGTIEDKVKWAREHXE 689
+KQRQK+ H+MEIQ NGG+IEDKVKWAREH E
Sbjct: 182 IKQRQKKAHVMEIQLNGGSIEDKVKWAREHLE 213
>AF016835-1|AAC26144.1| 416|Drosophila melanogaster ribosomal
protein L3 protein.
Length = 416
Score = 326 bits (801), Expect = 2e-89
Identities = 155/199 (77%), Positives = 171/199 (85%)
Frame = -3
Query: 689 EPIPVDSVFAQDEMIDCIGVTQGAKDTKVSLLVGTQRSYPVRHTKGLRKVACIGAWHPSR 510
+PI V +VF QDEMIDC+GVT+G V+ T++ P + KGLRKVACIGAWHPSR
Sbjct: 203 KPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKK-LPRKTHKGLRKVACIGAWHPSR 261
Query: 509 VSFTVARAGQKGYHHRTEMXKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFP 330
VS TVARAGQKGYHHRTE+ KKIYRIG GIH KDGKVIKNNASTEYDL++KSITPMGGFP
Sbjct: 262 VSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGKVIKNNASTEYDLTDKSITPMGGFP 321
Query: 329 HYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQT 150
HYGEVNNDFVMIKGCC+G KKRIITLRKSL HTKR+ALE+I LKFIDTSSK GHGRFQT
Sbjct: 322 HYGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHTKRSALEQIKLKFIDTSSKMGHGRFQT 381
Query: 149 PADKAAFMGTLKKDRIREE 93
PADK AFMG LKKDR++EE
Sbjct: 382 PADKLAFMGPLKKDRLKEE 400
Score = 62.1 bits (144), Expect = 8e-10
Identities = 25/32 (78%), Positives = 29/32 (90%)
Frame = -1
Query: 784 VKQRQKRVHIMEIQXNGGTIEDKVKWAREHXE 689
+KQRQK+ H+MEIQ NGG+IEDKVKWAREH E
Sbjct: 171 IKQRQKKAHVMEIQLNGGSIEDKVKWAREHLE 202
>AE014297-1265|AAF54609.1| 403|Drosophila melanogaster CG4863-PE,
isoform E protein.
Length = 403
Score = 326 bits (801), Expect = 2e-89
Identities = 155/199 (77%), Positives = 171/199 (85%)
Frame = -3
Query: 689 EPIPVDSVFAQDEMIDCIGVTQGAKDTKVSLLVGTQRSYPVRHTKGLRKVACIGAWHPSR 510
+PI V +VF QDEMIDC+GVT+G V+ T++ P + KGLRKVACIGAWHPSR
Sbjct: 190 KPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKK-LPRKTHKGLRKVACIGAWHPSR 248
Query: 509 VSFTVARAGQKGYHHRTEMXKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFP 330
VS TVARAGQKGYHHRTE+ KKIYRIG GIH KDGKVIKNNASTEYDL++KSITPMGGFP
Sbjct: 249 VSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGKVIKNNASTEYDLTDKSITPMGGFP 308
Query: 329 HYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQT 150
HYGEVNNDFVMIKGCC+G KKRIITLRKSL HTKR+ALE+I LKFIDTSSK GHGRFQT
Sbjct: 309 HYGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHTKRSALEQIKLKFIDTSSKMGHGRFQT 368
Query: 149 PADKAAFMGTLKKDRIREE 93
PADK AFMG LKKDR++EE
Sbjct: 369 PADKLAFMGPLKKDRLKEE 387
Score = 62.1 bits (144), Expect = 8e-10
Identities = 25/32 (78%), Positives = 29/32 (90%)
Frame = -1
Query: 784 VKQRQKRVHIMEIQXNGGTIEDKVKWAREHXE 689
+KQRQK+ H+MEIQ NGG+IEDKVKWAREH E
Sbjct: 158 IKQRQKKAHVMEIQLNGGSIEDKVKWAREHLE 189
>AE014297-1264|AAN13496.1| 403|Drosophila melanogaster CG4863-PB,
isoform B protein.
Length = 403
Score = 326 bits (801), Expect = 2e-89
Identities = 155/199 (77%), Positives = 171/199 (85%)
Frame = -3
Query: 689 EPIPVDSVFAQDEMIDCIGVTQGAKDTKVSLLVGTQRSYPVRHTKGLRKVACIGAWHPSR 510
+PI V +VF QDEMIDC+GVT+G V+ T++ P + KGLRKVACIGAWHPSR
Sbjct: 190 KPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKK-LPRKTHKGLRKVACIGAWHPSR 248
Query: 509 VSFTVARAGQKGYHHRTEMXKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFP 330
VS TVARAGQKGYHHRTE+ KKIYRIG GIH KDGKVIKNNASTEYDL++KSITPMGGFP
Sbjct: 249 VSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGKVIKNNASTEYDLTDKSITPMGGFP 308
Query: 329 HYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQT 150
HYGEVNNDFVMIKGCC+G KKRIITLRKSL HTKR+ALE+I LKFIDTSSK GHGRFQT
Sbjct: 309 HYGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHTKRSALEQIKLKFIDTSSKMGHGRFQT 368
Query: 149 PADKAAFMGTLKKDRIREE 93
PADK AFMG LKKDR++EE
Sbjct: 369 PADKLAFMGPLKKDRLKEE 387
Score = 62.1 bits (144), Expect = 8e-10
Identities = 25/32 (78%), Positives = 29/32 (90%)
Frame = -1
Query: 784 VKQRQKRVHIMEIQXNGGTIEDKVKWAREHXE 689
+KQRQK+ H+MEIQ NGG+IEDKVKWAREH E
Sbjct: 158 IKQRQKKAHVMEIQLNGGSIEDKVKWAREHLE 189
>AE014297-1262|AAF54610.2| 416|Drosophila melanogaster CG4863-PA,
isoform A protein.
Length = 416
Score = 326 bits (801), Expect = 2e-89
Identities = 155/199 (77%), Positives = 171/199 (85%)
Frame = -3
Query: 689 EPIPVDSVFAQDEMIDCIGVTQGAKDTKVSLLVGTQRSYPVRHTKGLRKVACIGAWHPSR 510
+PI V +VF QDEMIDC+GVT+G V+ T++ P + KGLRKVACIGAWHPSR
Sbjct: 203 KPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKK-LPRKTHKGLRKVACIGAWHPSR 261
Query: 509 VSFTVARAGQKGYHHRTEMXKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFP 330
VS TVARAGQKGYHHRTE+ KKIYRIG GIH KDGKVIKNNASTEYDL++KSITPMGGFP
Sbjct: 262 VSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGKVIKNNASTEYDLTDKSITPMGGFP 321
Query: 329 HYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQT 150
HYGEVNNDFVMIKGCC+G KKRIITLRKSL HTKR+ALE+I LKFIDTSSK GHGRFQT
Sbjct: 322 HYGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHTKRSALEQIKLKFIDTSSKMGHGRFQT 381
Query: 149 PADKAAFMGTLKKDRIREE 93
PADK AFMG LKKDR++EE
Sbjct: 382 PADKLAFMGPLKKDRLKEE 400
Score = 62.1 bits (144), Expect = 8e-10
Identities = 25/32 (78%), Positives = 29/32 (90%)
Frame = -1
Query: 784 VKQRQKRVHIMEIQXNGGTIEDKVKWAREHXE 689
+KQRQK+ H+MEIQ NGG+IEDKVKWAREH E
Sbjct: 171 IKQRQKKAHVMEIQLNGGSIEDKVKWAREHLE 202
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,116,260
Number of Sequences: 53049
Number of extensions: 821817
Number of successful extensions: 2228
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2110
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2218
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3613676352
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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