Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP11_T7_E09
(784 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal prote... 256 1e-68
Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal prote... 256 1e-68
Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical p... 256 1e-68
Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical p... 256 1e-68
Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical pr... 256 1e-68
Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical pr... 256 1e-68
Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical p... 242 2e-64
Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical pr... 242 2e-64
>Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 256 bits (627), Expect = 1e-68
Identities = 126/196 (64%), Positives = 153/196 (78%)
Frame = -3
Query: 683 IPVDSVFAQDEMIDCIGVTQGAKDTKVSLLVGTQRSYPVRHTKGLRKVACIGAWHPSRVS 504
+ VD+VFAQDEMID IGVT+G V+ T++ P + KGLRKVACIGAWHPSRV+
Sbjct: 205 VQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKK-LPRKTHKGLRKVACIGAWHPSRVA 263
Query: 503 FTVARAGQKGYHHRTEMXKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHY 324
FTVARAGQKG+HHRT + KIYRIG+ ++GK NN STE+DL++K+ITPMGGFP Y
Sbjct: 264 FTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRY 320
Query: 323 GEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPA 144
G VN D++M++G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A
Sbjct: 321 GIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTA 380
Query: 143 DKAAFMGTLKKDRIRE 96
+K AFMG LK+D + E
Sbjct: 381 EKRAFMGKLKRDFLAE 396
Score = 53.2 bits (122), Expect = 2e-07
Identities = 21/32 (65%), Positives = 27/32 (84%)
Frame = -1
Query: 784 VKQRQKRVHIMEIQXNGGTIEDKVKWAREHXE 689
+++RQK+ H++EIQ NGGTIE KV WAREH E
Sbjct: 171 LRRRQKKAHLVEIQVNGGTIEQKVDWAREHLE 202
>Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 256 bits (627), Expect = 1e-68
Identities = 126/196 (64%), Positives = 153/196 (78%)
Frame = -3
Query: 683 IPVDSVFAQDEMIDCIGVTQGAKDTKVSLLVGTQRSYPVRHTKGLRKVACIGAWHPSRVS 504
+ VD+VFAQDEMID IGVT+G V+ T++ P + KGLRKVACIGAWHPSRV+
Sbjct: 205 VQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKK-LPRKTHKGLRKVACIGAWHPSRVA 263
Query: 503 FTVARAGQKGYHHRTEMXKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHY 324
FTVARAGQKG+HHRT + KIYRIG+ ++GK NN STE+DL++K+ITPMGGFP Y
Sbjct: 264 FTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRY 320
Query: 323 GEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPA 144
G VN D++M++G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A
Sbjct: 321 GIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTA 380
Query: 143 DKAAFMGTLKKDRIRE 96
+K AFMG LK+D + E
Sbjct: 381 EKRAFMGKLKRDFLAE 396
Score = 53.2 bits (122), Expect = 2e-07
Identities = 21/32 (65%), Positives = 27/32 (84%)
Frame = -1
Query: 784 VKQRQKRVHIMEIQXNGGTIEDKVKWAREHXE 689
+++RQK+ H++EIQ NGGTIE KV WAREH E
Sbjct: 171 LRRRQKKAHLVEIQVNGGTIEQKVDWAREHLE 202
>Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 256 bits (627), Expect = 1e-68
Identities = 126/196 (64%), Positives = 153/196 (78%)
Frame = -3
Query: 683 IPVDSVFAQDEMIDCIGVTQGAKDTKVSLLVGTQRSYPVRHTKGLRKVACIGAWHPSRVS 504
+ VD+VFAQDEMID IGVT+G V+ T++ P + KGLRKVACIGAWHPSRV+
Sbjct: 107 VQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKK-LPRKTHKGLRKVACIGAWHPSRVA 165
Query: 503 FTVARAGQKGYHHRTEMXKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHY 324
FTVARAGQKG+HHRT + KIYRIG+ ++GK NN STE+DL++K+ITPMGGFP Y
Sbjct: 166 FTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRY 222
Query: 323 GEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPA 144
G VN D++M++G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A
Sbjct: 223 GIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTA 282
Query: 143 DKAAFMGTLKKDRIRE 96
+K AFMG LK+D + E
Sbjct: 283 EKRAFMGKLKRDFLAE 298
Score = 53.2 bits (122), Expect = 2e-07
Identities = 21/32 (65%), Positives = 27/32 (84%)
Frame = -1
Query: 784 VKQRQKRVHIMEIQXNGGTIEDKVKWAREHXE 689
+++RQK+ H++EIQ NGGTIE KV WAREH E
Sbjct: 73 LRRRQKKAHLVEIQVNGGTIEQKVDWAREHLE 104
>Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 256 bits (627), Expect = 1e-68
Identities = 126/196 (64%), Positives = 153/196 (78%)
Frame = -3
Query: 683 IPVDSVFAQDEMIDCIGVTQGAKDTKVSLLVGTQRSYPVRHTKGLRKVACIGAWHPSRVS 504
+ VD+VFAQDEMID IGVT+G V+ T++ P + KGLRKVACIGAWHPSRV+
Sbjct: 205 VQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKK-LPRKTHKGLRKVACIGAWHPSRVA 263
Query: 503 FTVARAGQKGYHHRTEMXKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHY 324
FTVARAGQKG+HHRT + KIYRIG+ ++GK NN STE+DL++K+ITPMGGFP Y
Sbjct: 264 FTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRY 320
Query: 323 GEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPA 144
G VN D++M++G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A
Sbjct: 321 GIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTA 380
Query: 143 DKAAFMGTLKKDRIRE 96
+K AFMG LK+D + E
Sbjct: 381 EKRAFMGKLKRDFLAE 396
Score = 53.2 bits (122), Expect = 2e-07
Identities = 21/32 (65%), Positives = 27/32 (84%)
Frame = -1
Query: 784 VKQRQKRVHIMEIQXNGGTIEDKVKWAREHXE 689
+++RQK+ H++EIQ NGGTIE KV WAREH E
Sbjct: 171 LRRRQKKAHLVEIQVNGGTIEQKVDWAREHLE 202
>Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 256 bits (627), Expect = 1e-68
Identities = 126/196 (64%), Positives = 153/196 (78%)
Frame = -3
Query: 683 IPVDSVFAQDEMIDCIGVTQGAKDTKVSLLVGTQRSYPVRHTKGLRKVACIGAWHPSRVS 504
+ VD+VFAQDEMID IGVT+G V+ T++ P + KGLRKVACIGAWHPSRV+
Sbjct: 107 VQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKK-LPRKTHKGLRKVACIGAWHPSRVA 165
Query: 503 FTVARAGQKGYHHRTEMXKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHY 324
FTVARAGQKG+HHRT + KIYRIG+ ++GK NN STE+DL++K+ITPMGGFP Y
Sbjct: 166 FTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRY 222
Query: 323 GEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPA 144
G VN D++M++G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A
Sbjct: 223 GIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTA 282
Query: 143 DKAAFMGTLKKDRIRE 96
+K AFMG LK+D + E
Sbjct: 283 EKRAFMGKLKRDFLAE 298
Score = 53.2 bits (122), Expect = 2e-07
Identities = 21/32 (65%), Positives = 27/32 (84%)
Frame = -1
Query: 784 VKQRQKRVHIMEIQXNGGTIEDKVKWAREHXE 689
+++RQK+ H++EIQ NGGTIE KV WAREH E
Sbjct: 73 LRRRQKKAHLVEIQVNGGTIEQKVDWAREHLE 104
>Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 256 bits (627), Expect = 1e-68
Identities = 126/196 (64%), Positives = 153/196 (78%)
Frame = -3
Query: 683 IPVDSVFAQDEMIDCIGVTQGAKDTKVSLLVGTQRSYPVRHTKGLRKVACIGAWHPSRVS 504
+ VD+VFAQDEMID IGVT+G V+ T++ P + KGLRKVACIGAWHPSRV+
Sbjct: 205 VQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKK-LPRKTHKGLRKVACIGAWHPSRVA 263
Query: 503 FTVARAGQKGYHHRTEMXKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHY 324
FTVARAGQKG+HHRT + KIYRIG+ ++GK NN STE+DL++K+ITPMGGFP Y
Sbjct: 264 FTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRY 320
Query: 323 GEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPA 144
G VN D++M++G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A
Sbjct: 321 GIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTA 380
Query: 143 DKAAFMGTLKKDRIRE 96
+K AFMG LK+D + E
Sbjct: 381 EKRAFMGKLKRDFLAE 396
Score = 53.2 bits (122), Expect = 2e-07
Identities = 21/32 (65%), Positives = 27/32 (84%)
Frame = -1
Query: 784 VKQRQKRVHIMEIQXNGGTIEDKVKWAREHXE 689
+++RQK+ H++EIQ NGGTIE KV WAREH E
Sbjct: 171 LRRRQKKAHLVEIQVNGGTIEQKVDWAREHLE 202
>Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 242 bits (593), Expect = 2e-64
Identities = 120/191 (62%), Positives = 146/191 (76%)
Frame = -3
Query: 668 VFAQDEMIDCIGVTQGAKDTKVSLLVGTQRSYPVRHTKGLRKVACIGAWHPSRVSFTVAR 489
V A +MID IGVT+G V+ T++ P + KGLRKVACIGAWHPSRV+FTVAR
Sbjct: 162 VIAHTQMIDTIGVTRGHGFKGVTSRWHTKK-LPRKTHKGLRKVACIGAWHPSRVAFTVAR 220
Query: 488 AGQKGYHHRTEMXKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNN 309
AGQKG+HHRT + KIYRIG+ ++GK NN STE+DL++K+ITPMGGFP YG VN
Sbjct: 221 AGQKGFHHRTIINNKIYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQ 277
Query: 308 DFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAF 129
D++M++G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AF
Sbjct: 278 DYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAF 337
Query: 128 MGTLKKDRIRE 96
MG LK+D + E
Sbjct: 338 MGKLKRDFLAE 348
>Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 242 bits (593), Expect = 2e-64
Identities = 120/191 (62%), Positives = 146/191 (76%)
Frame = -3
Query: 668 VFAQDEMIDCIGVTQGAKDTKVSLLVGTQRSYPVRHTKGLRKVACIGAWHPSRVSFTVAR 489
V A +MID IGVT+G V+ T++ P + KGLRKVACIGAWHPSRV+FTVAR
Sbjct: 162 VIAHTQMIDTIGVTRGHGFKGVTSRWHTKK-LPRKTHKGLRKVACIGAWHPSRVAFTVAR 220
Query: 488 AGQKGYHHRTEMXKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNN 309
AGQKG+HHRT + KIYRIG+ ++GK NN STE+DL++K+ITPMGGFP YG VN
Sbjct: 221 AGQKGFHHRTIINNKIYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQ 277
Query: 308 DFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAF 129
D++M++G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AF
Sbjct: 278 DYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAF 337
Query: 128 MGTLKKDRIRE 96
MG LK+D + E
Sbjct: 338 MGKLKRDFLAE 348
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,039,337
Number of Sequences: 27780
Number of extensions: 425412
Number of successful extensions: 1025
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 958
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1001
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1893203640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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