Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP11_T7_E08
         (623 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr...    23   5.1  
AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase assoc...    23   8.4  
AC006638-1|AAK85482.1|  495|Caenorhabditis elegans Cyclase assoc...    23   9.2  

>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
           protein F15B9.4 protein.
          Length = 1140

 Score = 23.4 bits (48), Expect(2) = 5.1
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = -3

Query: 303 GPPPPPP 283
           GPPPPPP
Sbjct: 550 GPPPPPP 556



 Score = 23.4 bits (48), Expect(2) = 8.5
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = -3

Query: 303 GPPPPPP 283
           GPPPPPP
Sbjct: 575 GPPPPPP 581



 Score = 23.0 bits (47), Expect(2) = 5.1
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = -3

Query: 300 PPPPPPXF 277
           PPPPPP F
Sbjct: 580 PPPPPPSF 587



 Score = 22.2 bits (45), Expect(2) = 8.5
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -3

Query: 300 PPPPPPXFF 274
           PPPPPP  F
Sbjct: 579 PPPPPPPSF 587


>AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase associated
            protein homologprotein 1, isoform a protein.
          Length = 1256

 Score = 23.4 bits (48), Expect(2) = 8.4
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = -3

Query: 303  GPPPPPP 283
            GPPPPPP
Sbjct: 1011 GPPPPPP 1017



 Score = 22.2 bits (45), Expect(2) = 8.4
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -3

Query: 300  PPPPPPXFF 274
            PPPPP  FF
Sbjct: 1016 PPPPPADFF 1024


>AC006638-1|AAK85482.1|  495|Caenorhabditis elegans Cyclase
           associated protein homologprotein 1, isoform b protein.
          Length = 495

 Score = 23.4 bits (48), Expect(2) = 9.2
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = -3

Query: 303 GPPPPPP 283
           GPPPPPP
Sbjct: 250 GPPPPPP 256



 Score = 22.2 bits (45), Expect(2) = 9.2
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -3

Query: 300 PPPPPPXFF 274
           PPPPP  FF
Sbjct: 255 PPPPPADFF 263


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,264,823
Number of Sequences: 27780
Number of extensions: 125887
Number of successful extensions: 1141
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 423
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1086
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1363963182
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)