Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP11_T7_E04
         (817 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X70944-1|CAA50283.1|  707|Homo sapiens PTB-associated splicing f...    34   0.71 
BC051192-1|AAH51192.1|  707|Homo sapiens splicing factor proline...    34   0.71 
BC027708-1|AAH27708.1|  525|Homo sapiens SFPQ protein protein.         34   0.71 
BC004534-1|AAH04534.2|  634|Homo sapiens SFPQ protein protein.         34   0.71 
AL590434-2|CAI12467.1|  707|Homo sapiens splicing factor proline...    34   0.71 
DQ986374-1|ABJ15760.1|  447|Homo sapiens T-box transcription fac...    31   6.6  
AC080162-1|AAY14856.1|  635|Homo sapiens unknown protein.              31   6.6  
AB007860-1|BAA23696.2| 1022|Homo sapiens KIAA0400 protein.             31   6.6  
U29727-1|AAA82933.1|  816|Homo sapiens BMK1 gamma kinase protein.      30   8.7  
U29726-1|AAA82932.1|  816|Homo sapiens BMK1 beta kinase protein.       30   8.7  
U29725-1|AAA82931.1|  816|Homo sapiens BMK1 alpha kinase protein.      30   8.7  
U25278-1|AAA81381.1|  815|Homo sapiens ERK5 protein.                   30   8.7  
BC030134-1|AAH30134.1|  816|Homo sapiens mitogen-activated prote...    30   8.7  
BC009963-1|AAH09963.1|  816|Homo sapiens mitogen-activated prote...    30   8.7  
BC007992-1|AAH07992.1|  677|Homo sapiens mitogen-activated prote...    30   8.7  
BC007404-1|AAH07404.1|  677|Homo sapiens mitogen-activated prote...    30   8.7  

>X70944-1|CAA50283.1|  707|Homo sapiens PTB-associated splicing
           factor protein.
          Length = 707

 Score = 33.9 bits (74), Expect = 0.71
 Identities = 26/66 (39%), Positives = 29/66 (43%), Gaps = 3/66 (4%)
 Frame = -1

Query: 688 HQPD-HQIPDSXHQPPPDLTSISINPLTPY*KEFAPGL--KPPLSSEAPSAYLTPSSLGM 518
           HQP  H  P    QPPP     S  P+       APG+   PP SS AP A  TP + G 
Sbjct: 85  HQPPPHPQPHQQQQPPPPPQDSS-KPVVAQGPGPAPGVGSAPPASSSAPPA--TPPTSGA 141

Query: 517 AKGVSP 500
             G  P
Sbjct: 142 PPGSGP 147


>BC051192-1|AAH51192.1|  707|Homo sapiens splicing factor
           proline/glutamine-rich (polypyrimidine tract binding
           protein as protein.
          Length = 707

 Score = 33.9 bits (74), Expect = 0.71
 Identities = 26/66 (39%), Positives = 29/66 (43%), Gaps = 3/66 (4%)
 Frame = -1

Query: 688 HQPD-HQIPDSXHQPPPDLTSISINPLTPY*KEFAPGL--KPPLSSEAPSAYLTPSSLGM 518
           HQP  H  P    QPPP     S  P+       APG+   PP SS AP A  TP + G 
Sbjct: 85  HQPPPHPQPHQQQQPPPPPQDSS-KPVVAQGPGPAPGVGSTPPASSSAPPA--TPPTSGA 141

Query: 517 AKGVSP 500
             G  P
Sbjct: 142 PPGSGP 147


>BC027708-1|AAH27708.1|  525|Homo sapiens SFPQ protein protein.
          Length = 525

 Score = 33.9 bits (74), Expect = 0.71
 Identities = 26/66 (39%), Positives = 29/66 (43%), Gaps = 3/66 (4%)
 Frame = -1

Query: 688 HQPD-HQIPDSXHQPPPDLTSISINPLTPY*KEFAPGL--KPPLSSEAPSAYLTPSSLGM 518
           HQP  H  P    QPPP     S  P+       APG+   PP SS AP A  TP + G 
Sbjct: 85  HQPPPHPQPHQQQQPPPPPQDSS-KPVVAQGPGPAPGVGSAPPASSSAPPA--TPPTSGA 141

Query: 517 AKGVSP 500
             G  P
Sbjct: 142 PPGSGP 147


>BC004534-1|AAH04534.2|  634|Homo sapiens SFPQ protein protein.
          Length = 634

 Score = 33.9 bits (74), Expect = 0.71
 Identities = 26/66 (39%), Positives = 29/66 (43%), Gaps = 3/66 (4%)
 Frame = -1

Query: 688 HQPD-HQIPDSXHQPPPDLTSISINPLTPY*KEFAPGL--KPPLSSEAPSAYLTPSSLGM 518
           HQP  H  P    QPPP     S  P+       APG+   PP SS AP A  TP + G 
Sbjct: 12  HQPPPHPQPHQQQQPPPPPQDSS-KPVVAQGPGPAPGVGSAPPASSSAPPA--TPPTSGA 68

Query: 517 AKGVSP 500
             G  P
Sbjct: 69  PPGSGP 74


>AL590434-2|CAI12467.1|  707|Homo sapiens splicing factor
           proline/glutamine-rich (polypyrimidine tract binding
           protein as protein.
          Length = 707

 Score = 33.9 bits (74), Expect = 0.71
 Identities = 26/66 (39%), Positives = 29/66 (43%), Gaps = 3/66 (4%)
 Frame = -1

Query: 688 HQPD-HQIPDSXHQPPPDLTSISINPLTPY*KEFAPGL--KPPLSSEAPSAYLTPSSLGM 518
           HQP  H  P    QPPP     S  P+       APG+   PP SS AP A  TP + G 
Sbjct: 85  HQPPPHPQPHQQQQPPPPPQDSS-KPVVAQGPGPAPGVGSAPPASSSAPPA--TPPTSGA 141

Query: 517 AKGVSP 500
             G  P
Sbjct: 142 PPGSGP 147


>DQ986374-1|ABJ15760.1|  447|Homo sapiens T-box transcription factor
           TBX20 isoform A protein.
          Length = 447

 Score = 30.7 bits (66), Expect = 6.6
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = -3

Query: 713 PPXPGISXTSTRSSNPRFXTPTTPRLNIHFHQSPDAVLEGVR 588
           P  P    +S + S P F +   PR + +F Q P A ++G+R
Sbjct: 396 PLTPSAIASSMQGSGPTFPSFHMPRYHHYFQQGPYAAIQGLR 437


>AC080162-1|AAY14856.1|  635|Homo sapiens unknown protein.
          Length = 635

 Score = 30.7 bits (66), Expect = 6.6
 Identities = 21/57 (36%), Positives = 26/57 (45%)
 Frame = -1

Query: 667 PDSXHQPPPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSLGMAKGVSPP 497
           P + H P P L   S NPLTP      P  K P   EA S    P+  G+++   PP
Sbjct: 453 PPAVHPPLPPLRVTSTNPLTP--TPPPPVAKTPSVMEALSQPSKPAPPGISQIRPPP 507


>AB007860-1|BAA23696.2| 1022|Homo sapiens KIAA0400 protein.
          Length = 1022

 Score = 30.7 bits (66), Expect = 6.6
 Identities = 21/57 (36%), Positives = 26/57 (45%)
 Frame = -1

Query: 667  PDSXHQPPPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSLGMAKGVSPP 497
            P + H P P L   S NPLTP      P  K P   EA S    P+  G+++   PP
Sbjct: 840  PPAVHPPLPPLRVTSTNPLTP--TPPPPVAKTPSVMEALSQPSKPAPPGISQIRPPP 894


>U29727-1|AAA82933.1|  816|Homo sapiens BMK1 gamma kinase protein.
          Length = 816

 Score = 30.3 bits (65), Expect = 8.7
 Identities = 16/40 (40%), Positives = 21/40 (52%)
 Frame = -1

Query: 649 PPPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTPS 530
           PPP L   S   + PY   F PGL PP +  AP + ++ S
Sbjct: 671 PPPGLPGSSTPGVLPY---FPPGLPPPDAGGAPQSSMSES 707


>U29726-1|AAA82932.1|  816|Homo sapiens BMK1 beta kinase protein.
          Length = 816

 Score = 30.3 bits (65), Expect = 8.7
 Identities = 16/40 (40%), Positives = 21/40 (52%)
 Frame = -1

Query: 649 PPPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTPS 530
           PPP L   S   + PY   F PGL PP +  AP + ++ S
Sbjct: 671 PPPGLPGSSTPGVLPY---FPPGLPPPDAGGAPQSSMSES 707


>U29725-1|AAA82931.1|  816|Homo sapiens BMK1 alpha kinase protein.
          Length = 816

 Score = 30.3 bits (65), Expect = 8.7
 Identities = 16/40 (40%), Positives = 21/40 (52%)
 Frame = -1

Query: 649 PPPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTPS 530
           PPP L   S   + PY   F PGL PP +  AP + ++ S
Sbjct: 671 PPPGLPGSSTPGVLPY---FPPGLPPPDAGGAPQSSMSES 707


>U25278-1|AAA81381.1|  815|Homo sapiens ERK5 protein.
          Length = 815

 Score = 30.3 bits (65), Expect = 8.7
 Identities = 16/40 (40%), Positives = 21/40 (52%)
 Frame = -1

Query: 649 PPPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTPS 530
           PPP L   S   + PY   F PGL PP +  AP + ++ S
Sbjct: 670 PPPGLPGSSTPGVLPY---FPPGLPPPDAGGAPQSSMSES 706


>BC030134-1|AAH30134.1|  816|Homo sapiens mitogen-activated protein
           kinase 7 protein.
          Length = 816

 Score = 30.3 bits (65), Expect = 8.7
 Identities = 16/40 (40%), Positives = 21/40 (52%)
 Frame = -1

Query: 649 PPPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTPS 530
           PPP L   S   + PY   F PGL PP +  AP + ++ S
Sbjct: 671 PPPGLPGSSTPGVLPY---FPPGLPPPDAGGAPQSSMSES 707


>BC009963-1|AAH09963.1|  816|Homo sapiens mitogen-activated protein
           kinase 7 protein.
          Length = 816

 Score = 30.3 bits (65), Expect = 8.7
 Identities = 16/40 (40%), Positives = 21/40 (52%)
 Frame = -1

Query: 649 PPPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTPS 530
           PPP L   S   + PY   F PGL PP +  AP + ++ S
Sbjct: 671 PPPGLPGSSTPGVLPY---FPPGLPPPDAGGAPQSSMSES 707


>BC007992-1|AAH07992.1|  677|Homo sapiens mitogen-activated protein
           kinase 7 protein.
          Length = 677

 Score = 30.3 bits (65), Expect = 8.7
 Identities = 16/40 (40%), Positives = 21/40 (52%)
 Frame = -1

Query: 649 PPPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTPS 530
           PPP L   S   + PY   F PGL PP +  AP + ++ S
Sbjct: 532 PPPGLPGSSTPGVLPY---FPPGLPPPDAGGAPQSSMSES 568


>BC007404-1|AAH07404.1|  677|Homo sapiens mitogen-activated protein
           kinase 7 protein.
          Length = 677

 Score = 30.3 bits (65), Expect = 8.7
 Identities = 16/40 (40%), Positives = 21/40 (52%)
 Frame = -1

Query: 649 PPPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTPS 530
           PPP L   S   + PY   F PGL PP +  AP + ++ S
Sbjct: 532 PPPGLPGSSTPGVLPY---FPPGLPPPDAGGAPQSSMSES 568


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,518,929
Number of Sequences: 237096
Number of extensions: 2374246
Number of successful extensions: 5848
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 5272
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5830
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10147868276
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)