Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP11_T7_E04
         (817 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70757-4|CAA94800.1| 1208|Caenorhabditis elegans Hypothetical pr...    32   0.56 
Z75714-2|CAB00059.1|  474|Caenorhabditis elegans Hypothetical pr...    30   1.7  
AF047661-4|AAC04435.2|  931|Caenorhabditis elegans Hypothetical ...    29   5.3  
Z49908-11|CAA90104.2|  355|Caenorhabditis elegans Hypothetical p...    28   9.2  
Z49070-5|CAA88872.2|  355|Caenorhabditis elegans Hypothetical pr...    28   9.2  
AL117195-31|CAN99709.1| 1459|Caenorhabditis elegans Hypothetical...    28   9.2  
AL117195-30|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical...    28   9.2  

>Z70757-4|CAA94800.1| 1208|Caenorhabditis elegans Hypothetical
           protein ZK287.4 protein.
          Length = 1208

 Score = 31.9 bits (69), Expect = 0.56
 Identities = 31/91 (34%), Positives = 41/91 (45%), Gaps = 9/91 (9%)
 Frame = -1

Query: 685 QPDHQIPDSXHQPPPDLTSISINPL--------TPY*KEFA-PGLKPPLSSEAPSAYLTP 533
           QP H I  S   PPPD   IS NP+        TP    +  P L PP ++ +P   L P
Sbjct: 651 QPTHYIVPSQSSPPPDPYVIS-NPIPTLSPTAGTPSFNIYPYPSLPPPTTTISPLPTLLP 709

Query: 532 SSLGMAKGVSPPYFQVNDESQASRLISRHST 440
            ++      SPP    N++S  SR I   +T
Sbjct: 710 PNISYV--TSPP---DNNDSPCSRSIYGDAT 735


>Z75714-2|CAB00059.1|  474|Caenorhabditis elegans Hypothetical
           protein ZC434.3 protein.
          Length = 474

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 13/40 (32%), Positives = 24/40 (60%)
 Frame = -1

Query: 697 FRXHQPDHQIPDSXHQPPPDLTSISINPLTPY*KEFAPGL 578
           F+  Q D+ +P   +QP P   + S++PL P+  +++ GL
Sbjct: 40  FKPRQEDYNLPP-FYQPNPGRDASSLSPLFPFHSQYSNGL 78


>AF047661-4|AAC04435.2|  931|Caenorhabditis elegans Hypothetical
            protein M70.1 protein.
          Length = 931

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 21/81 (25%), Positives = 29/81 (35%), Gaps = 3/81 (3%)
 Frame = -1

Query: 667  PDSXHQPPPDLTSISINPLTPY*KEFAPGLK-PPLSSEAPSAYLTPSSL--GMAKGVSPP 497
            PD    P P    + + P  P   E    +      +E P   +TP       A  V   
Sbjct: 825  PDVPVNPTPQTAKVPVAPAPPAKDEKPKDVNVKKAETEKPKTEVTPKPAHKSAASKVDAT 884

Query: 496  YFQVNDESQASRLISRHSTHT 434
              +  D+S A   IS+  THT
Sbjct: 885  NTKTEDQSSAQNCISQSMTHT 905


>Z49908-11|CAA90104.2|  355|Caenorhabditis elegans Hypothetical
           protein T09F3.1 protein.
          Length = 355

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 18/58 (31%), Positives = 28/58 (48%)
 Frame = -1

Query: 661 SXHQPPPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSLGMAKGVSPPYFQ 488
           S +QP   +TS + +P+TP     A       ++ +PSA  T S++  A  V P   Q
Sbjct: 45  SSNQPMSTVTSSTTSPITPSTPPRASSSSSMFAASSPSAAATYSTVTTAALVVPTTLQ 102


>Z49070-5|CAA88872.2|  355|Caenorhabditis elegans Hypothetical
           protein T09F3.1 protein.
          Length = 355

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 18/58 (31%), Positives = 28/58 (48%)
 Frame = -1

Query: 661 SXHQPPPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSLGMAKGVSPPYFQ 488
           S +QP   +TS + +P+TP     A       ++ +PSA  T S++  A  V P   Q
Sbjct: 45  SSNQPMSTVTSSTTSPITPSTPPRASSSSSMFAASSPSAAATYSTVTTAALVVPTTLQ 102


>AL117195-31|CAN99709.1| 1459|Caenorhabditis elegans Hypothetical
            protein Y57A10A.18b protein.
          Length = 1459

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = -1

Query: 571  PLSSEAPSAYLTPSSLGMAKGVSPP 497
            P+++EAP+A   PS   + +G SPP
Sbjct: 1203 PVAAEAPAAAAAPSRARVPRGPSPP 1227


>AL117195-30|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical
            protein Y57A10A.18a protein.
          Length = 1456

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = -1

Query: 571  PLSSEAPSAYLTPSSLGMAKGVSPP 497
            P+++EAP+A   PS   + +G SPP
Sbjct: 1203 PVAAEAPAAAAAPSRARVPRGPSPP 1227


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,442,675
Number of Sequences: 27780
Number of extensions: 342226
Number of successful extensions: 997
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 941
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 997
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2008899418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)