Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP11_T7_D16
         (806 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical pr...    39   0.005
Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical pr...    39   0.005
Z81082-3|CAB03095.2|  603|Caenorhabditis elegans Hypothetical pr...    32   0.56 
AC006761-8|AAF60552.2|  524|Caenorhabditis elegans Hypothetical ...    30   2.2  
U29614-5|AAA68810.2|  240|Caenorhabditis elegans Hypothetical pr...    29   3.0  

>Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical
           protein C46C2.1b protein.
          Length = 1677

 Score = 38.7 bits (86), Expect = 0.005
 Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
 Frame = -2

Query: 646 TNHPRLNIHFHQSPDAVLEGVRAGXKPP-LSSEAPSAYLSPLVTG 515
           TNHP LN H  + P A++ G   G  PP L S   +A  +PL++G
Sbjct: 147 TNHPHLNHHVSRIPQAIVTGGTNGSLPPLLISPTSAAAATPLISG 191


>Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical
           protein C46C2.1a protein.
          Length = 1838

 Score = 38.7 bits (86), Expect = 0.005
 Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
 Frame = -2

Query: 646 TNHPRLNIHFHQSPDAVLEGVRAGXKPP-LSSEAPSAYLSPLVTG 515
           TNHP LN H  + P A++ G   G  PP L S   +A  +PL++G
Sbjct: 147 TNHPHLNHHVSRIPQAIVTGGTNGSLPPLLISPTSAAAATPLISG 191


>Z81082-3|CAB03095.2|  603|Caenorhabditis elegans Hypothetical
           protein F42G4.3a protein.
          Length = 603

 Score = 31.9 bits (69), Expect = 0.56
 Identities = 18/48 (37%), Positives = 27/48 (56%)
 Frame = -2

Query: 667 IKSPIPYTNHPRLNIHFHQSPDAVLEGVRAGXKPPLSSEAPSAYLSPL 524
           I SP  Y+N PR    FH+ P+A L   +   +  LSS +P++  SP+
Sbjct: 111 IPSPPTYSNQPRPLGDFHRDPNA-LSQFQQSREALLSSTSPTSNYSPI 157


>AC006761-8|AAF60552.2|  524|Caenorhabditis elegans Hypothetical
           protein Y41G9A.6 protein.
          Length = 524

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
 Frame = +3

Query: 459 KLVIHHSLEN--KGAKPLXPCPVTRGERYADGASDDNGGF 572
           KL+I H   N  +  +PL P P+T G+R +  + + +G F
Sbjct: 7   KLIIDHRKNNLNEELRPLRPHPITMGKRKSQLSEEQDGSF 46


>U29614-5|AAA68810.2|  240|Caenorhabditis elegans Hypothetical
           protein F18E9.4 protein.
          Length = 240

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
 Frame = -2

Query: 691 AISVHHPIIKSPIPYTN---HPRLNIHFHQSPDAVLEGVRAGXKPPLSSEAPSAYLSPLV 521
           A++V H  IK+   YT+   H  L I  H        G+     PPL  E PS    P++
Sbjct: 42  AVNVTHQEIKNDKEYTSTTTHDPLEIS-HSKRFLPQSGIENLVHPPLGGETPSVNEEPII 100

Query: 520 T 518
           T
Sbjct: 101 T 101


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,340,225
Number of Sequences: 27780
Number of extensions: 362014
Number of successful extensions: 1042
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 990
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1042
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1977346024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)