Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP11_T7_D14
(1017 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X17568-1|CAB57868.1| 240|Homo sapiens snRNP B' protein protein. 34 0.72
X17567-1|CAB57867.1| 231|Homo sapiens snRNP B protein protein. 34 0.72
X15893-1|CAA33902.1| 231|Homo sapiens protein ( Human B cod gen... 34 0.72
M34082-1|AAA36579.1| 233|Homo sapiens protein ( Human small nuc... 34 0.72
M34081-1|AAA36578.1| 224|Homo sapiens protein ( Human small nuc... 34 0.72
CR456969-1|CAG33250.1| 240|Homo sapiens SNRPB protein. 34 0.72
BC080516-1|AAH80516.1| 231|Homo sapiens small nuclear ribonucle... 34 0.72
BC003530-1|AAH03530.1| 234|Homo sapiens SNRPB protein protein. 34 0.72
AY742712-1|AAU89981.1| 231|Homo sapiens small nuclear ribonucle... 34 0.72
AL049650-8|CAB46715.1| 240|Homo sapiens small nuclear ribonucle... 34 0.72
AL049650-7|CAB46714.1| 231|Homo sapiens small nuclear ribonucle... 34 0.72
BX640870-1|CAE45928.1| 510|Homo sapiens hypothetical protein pr... 33 1.3
BC110288-1|AAI10289.1| 403|Homo sapiens WIPF1 protein protein. 33 1.3
AF106062-1|AAD45972.1| 312|Homo sapiens Wiskott-Aldrich syndrom... 33 1.3
AF031588-1|AAC03767.1| 503|Homo sapiens WASP interacting protei... 33 1.3
AC010894-2|AAY14708.1| 503|Homo sapiens unknown protein. 33 1.3
J04564-1|AAA60151.1| 285|Homo sapiens SNRPB protein. 32 2.9
BC064999-1|AAH64999.1| 1068|Homo sapiens DAAM1 protein protein. 31 6.7
BC038428-1|AAH38428.1| 1068|Homo sapiens DAAM1 protein protein. 31 6.7
BC024781-1|AAH24781.1| 662|Homo sapiens Similar to dishevelled ... 31 6.7
BC015804-1|AAH15804.1| 481|Homo sapiens SF3A2 protein protein. 31 6.7
AB014566-1|BAA31641.1| 1085|Homo sapiens KIAA0666 protein protein. 31 6.7
X86019-1|CAA60014.1| 494|Homo sapiens SH3-domain interacting pr... 31 8.9
>X17568-1|CAB57868.1| 240|Homo sapiens snRNP B' protein protein.
Length = 240
Score = 34.3 bits (75), Expect = 0.72
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +2
Query: 176 PSRGXXGPXTPLXKGXPPPXIXGPPRG 256
P RG GP P+ +G PPP + GPP G
Sbjct: 170 PGRG--GPPPPMGRGAPPPGMMGPPPG 194
>X17567-1|CAB57867.1| 231|Homo sapiens snRNP B protein protein.
Length = 231
Score = 34.3 bits (75), Expect = 0.72
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +2
Query: 176 PSRGXXGPXTPLXKGXPPPXIXGPPRG 256
P RG GP P+ +G PPP + GPP G
Sbjct: 170 PGRG--GPPPPMGRGAPPPGMMGPPPG 194
>X15893-1|CAA33902.1| 231|Homo sapiens protein ( Human B cod gene
for B/B' snRNP associated protein. ).
Length = 231
Score = 34.3 bits (75), Expect = 0.72
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +2
Query: 176 PSRGXXGPXTPLXKGXPPPXIXGPPRG 256
P RG GP P+ +G PPP + GPP G
Sbjct: 170 PGRG--GPPPPMGRGAPPPGMMGPPPG 194
>M34082-1|AAA36579.1| 233|Homo sapiens protein ( Human small
nuclear ribonucleoprotein particle SmB' mRNA, 3' end. ).
Length = 233
Score = 34.3 bits (75), Expect = 0.72
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +2
Query: 176 PSRGXXGPXTPLXKGXPPPXIXGPPRG 256
P RG GP P+ +G PPP + GPP G
Sbjct: 163 PGRG--GPPPPMGRGAPPPGMMGPPPG 187
>M34081-1|AAA36578.1| 224|Homo sapiens protein ( Human small
nuclear ribonucleoprotein particle SmB mRNA, 3' end. ).
Length = 224
Score = 34.3 bits (75), Expect = 0.72
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +2
Query: 176 PSRGXXGPXTPLXKGXPPPXIXGPPRG 256
P RG GP P+ +G PPP + GPP G
Sbjct: 163 PGRG--GPPPPMGRGAPPPGMMGPPPG 187
>CR456969-1|CAG33250.1| 240|Homo sapiens SNRPB protein.
Length = 240
Score = 34.3 bits (75), Expect = 0.72
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +2
Query: 176 PSRGXXGPXTPLXKGXPPPXIXGPPRG 256
P RG GP P+ +G PPP + GPP G
Sbjct: 170 PGRG--GPPPPMGRGAPPPGMMGPPPG 194
>BC080516-1|AAH80516.1| 231|Homo sapiens small nuclear
ribonucleoprotein polypeptides B and B1 protein.
Length = 231
Score = 34.3 bits (75), Expect = 0.72
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +2
Query: 176 PSRGXXGPXTPLXKGXPPPXIXGPPRG 256
P RG GP P+ +G PPP + GPP G
Sbjct: 170 PGRG--GPPPPMGRGAPPPGMMGPPPG 194
>BC003530-1|AAH03530.1| 234|Homo sapiens SNRPB protein protein.
Length = 234
Score = 34.3 bits (75), Expect = 0.72
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +2
Query: 176 PSRGXXGPXTPLXKGXPPPXIXGPPRG 256
P RG GP P+ +G PPP + GPP G
Sbjct: 170 PGRG--GPPPPMGRGAPPPGMMGPPPG 194
>AY742712-1|AAU89981.1| 231|Homo sapiens small nuclear
ribonucleoprotein polypeptide B protein.
Length = 231
Score = 34.3 bits (75), Expect = 0.72
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +2
Query: 176 PSRGXXGPXTPLXKGXPPPXIXGPPRG 256
P RG GP P+ +G PPP + GPP G
Sbjct: 170 PGRG--GPPPPMGRGAPPPGMMGPPPG 194
>AL049650-8|CAB46715.1| 240|Homo sapiens small nuclear
ribonucleoprotein polypeptides B and B1 protein.
Length = 240
Score = 34.3 bits (75), Expect = 0.72
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +2
Query: 176 PSRGXXGPXTPLXKGXPPPXIXGPPRG 256
P RG GP P+ +G PPP + GPP G
Sbjct: 170 PGRG--GPPPPMGRGAPPPGMMGPPPG 194
>AL049650-7|CAB46714.1| 231|Homo sapiens small nuclear
ribonucleoprotein polypeptides B and B1 protein.
Length = 231
Score = 34.3 bits (75), Expect = 0.72
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +2
Query: 176 PSRGXXGPXTPLXKGXPPPXIXGPPRG 256
P RG GP P+ +G PPP + GPP G
Sbjct: 170 PGRG--GPPPPMGRGAPPPGMMGPPPG 194
>BX640870-1|CAE45928.1| 510|Homo sapiens hypothetical protein
protein.
Length = 510
Score = 33.5 bits (73), Expect = 1.3
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +2
Query: 167 PPFPSRGXXGPXTPLXKGXPPPXIXGPP 250
PP PS G GP P PPP + PP
Sbjct: 346 PPLPSPGRSGPLPPPPSERPPPPVRDPP 373
>BC110288-1|AAI10289.1| 403|Homo sapiens WIPF1 protein protein.
Length = 403
Score = 33.5 bits (73), Expect = 1.3
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +2
Query: 167 PPFPSRGXXGPXTPLXKGXPPPXIXGPP 250
PP PS G GP P PPP + PP
Sbjct: 346 PPLPSPGRSGPLPPPPSERPPPPVRDPP 373
>AF106062-1|AAD45972.1| 312|Homo sapiens Wiskott-Aldrich syndrome
protein interacting protein protein.
Length = 312
Score = 33.5 bits (73), Expect = 1.3
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +2
Query: 167 PPFPSRGXXGPXTPLXKGXPPPXIXGPP 250
PP PS G GP P PPP + PP
Sbjct: 155 PPLPSPGRSGPLPPPPSERPPPPVRDPP 182
>AF031588-1|AAC03767.1| 503|Homo sapiens WASP interacting protein
protein.
Length = 503
Score = 33.5 bits (73), Expect = 1.3
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +2
Query: 167 PPFPSRGXXGPXTPLXKGXPPPXIXGPP 250
PP PS G GP P PPP + PP
Sbjct: 346 PPLPSPGRSGPLPPPPSERPPPPVRDPP 373
>AC010894-2|AAY14708.1| 503|Homo sapiens unknown protein.
Length = 503
Score = 33.5 bits (73), Expect = 1.3
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +2
Query: 167 PPFPSRGXXGPXTPLXKGXPPPXIXGPP 250
PP PS G GP P PPP + PP
Sbjct: 346 PPLPSPGRSGPLPPPPSERPPPPVRDPP 373
>J04564-1|AAA60151.1| 285|Homo sapiens SNRPB protein.
Length = 285
Score = 32.3 bits (70), Expect = 2.9
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +2
Query: 194 GPXTPLXKGXPPPXIXGPPRG 256
GP P+ +G PPP + GPP G
Sbjct: 173 GPPPPMGRGAPPPGMMGPPPG 193
>BC064999-1|AAH64999.1| 1068|Homo sapiens DAAM1 protein protein.
Length = 1068
Score = 31.1 bits (67), Expect = 6.7
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = +2
Query: 167 PPFPSRGXXGPXTPLXKGXPPPXIXGPPRGXFFXKP 274
PP P P PL G PPP PP G P
Sbjct: 555 PPLPGGMLPPPPPPLPPGGPPPPPGPPPLGAIMPPP 590
>BC038428-1|AAH38428.1| 1068|Homo sapiens DAAM1 protein protein.
Length = 1068
Score = 31.1 bits (67), Expect = 6.7
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = +2
Query: 167 PPFPSRGXXGPXTPLXKGXPPPXIXGPPRGXFFXKP 274
PP P P PL G PPP PP G P
Sbjct: 555 PPLPGGMLPPPPPPLPPGGPPPPPGPPPLGAIMPPP 590
>BC024781-1|AAH24781.1| 662|Homo sapiens Similar to dishevelled
associated activator of morphogenesis 2 protein.
Length = 662
Score = 31.1 bits (67), Expect = 6.7
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = +2
Query: 167 PPFPSRGXXGPXTPLXKGXPPPXIXGPPRGXFFXKP 274
PP P P PL G PPP PP G P
Sbjct: 149 PPLPGGMLPPPPPPLPPGGPPPPPGPPPLGAIMPPP 184
>BC015804-1|AAH15804.1| 481|Homo sapiens SF3A2 protein protein.
Length = 481
Score = 31.1 bits (67), Expect = 6.7
Identities = 15/29 (51%), Positives = 15/29 (51%)
Frame = +2
Query: 638 GXXXXXPPPPXKKKKXXXXGGGXKKKKKK 724
G PPPP KKKK KKKKKK
Sbjct: 453 GPGNIPPPPPKKKKKKKKKKKKKKKKKKK 481
>AB014566-1|BAA31641.1| 1085|Homo sapiens KIAA0666 protein protein.
Length = 1085
Score = 31.1 bits (67), Expect = 6.7
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = +2
Query: 167 PPFPSRGXXGPXTPLXKGXPPPXIXGPPRGXFFXKP 274
PP P P PL G PPP PP G P
Sbjct: 562 PPLPGGMLPPPPPPLPPGGPPPPPGPPPLGAIMPPP 597
>X86019-1|CAA60014.1| 494|Homo sapiens SH3-domain interacting
protein protein.
Length = 494
Score = 30.7 bits (66), Expect = 8.9
Identities = 13/29 (44%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Frame = +2
Query: 167 PPFPSRGXXGP-XTPLXKGXPPPXIXGPP 250
PP PS G GP P+ PPP + PP
Sbjct: 346 PPLPSPGRSGPLPPPVPSERPPPPVRDPP 374
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,178,316
Number of Sequences: 237096
Number of extensions: 1612144
Number of successful extensions: 8269
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 6109
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7527
length of database: 76,859,062
effective HSP length: 91
effective length of database: 55,283,326
effective search space used: 13654981522
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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