Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP11_T7_D14
         (1017 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr...    29   4.0  
AF003151-19|AAK18922.1|  988|Caenorhabditis elegans Hypothetical...    28   9.3  

>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
           protein C01G8.9a protein.
          Length = 1724

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 13/29 (44%), Positives = 14/29 (48%), Gaps = 1/29 (3%)
 Frame = +1

Query: 166 PPFSLPGXKXAXNPPXKR-XPPPXNXGAP 249
           PP+  PG      PP  R  PPP   GAP
Sbjct: 809 PPYPYPGGPVPPGPPQNRMPPPPPAQGAP 837


>AF003151-19|AAK18922.1|  988|Caenorhabditis elegans Hypothetical
           protein D1007.7 protein.
          Length = 988

 Score = 28.3 bits (60), Expect = 9.3
 Identities = 15/40 (37%), Positives = 16/40 (40%)
 Frame = +1

Query: 142 PFXXXXXXPPFSLPGXKXAXNPPXKRXPPPXNXGAPPGXF 261
           P       PP  +PG   A  PP    PPP   G PP  F
Sbjct: 700 PMFNLNAPPPPGIPGYPPAPPPPGVGPPPP--QGIPPMGF 737


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,460,367
Number of Sequences: 27780
Number of extensions: 199071
Number of successful extensions: 466
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 260
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 407
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2678332928
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)