Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP11_T7_D12
         (817 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_01_0482 + 3466314-3467411                                           29   4.4  
01_07_0084 + 40976976-40977164,40978174-40978201,40978445-409785...    29   4.4  
01_06_0938 - 33179237-33179362,33179485-33179668,33180114-331804...    29   5.8  
01_01_1010 - 7996921-7997673,7999212-7999399,7999688-7999784,800...    29   5.8  

>02_01_0482 + 3466314-3467411
          Length = 365

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 22/78 (28%), Positives = 36/78 (46%)
 Frame = -2

Query: 600 ELEVKPLMLLKHPTCLETVKRMRAYVGNTPSWDLSEKDALEFSKQAHLIRKQADTLYKTM 421
           EL VK  ++  +  C  +++  R   G  P  DL    A+     +H   K+A  L+ +M
Sbjct: 146 ELIVKNSLIDMYGKC-GSIELARGLFGLMPQKDLHSWTAMISGLASHGHGKEAVALFFSM 204

Query: 420 KDLFTVPDGLSFWEFFSA 367
           K+   +PD  +F    SA
Sbjct: 205 KEAGVLPDSTTFVVVLSA 222


>01_07_0084 +
           40976976-40977164,40978174-40978201,40978445-40978575,
           40978941-40979434,40979516-40979609,40979686-40979779,
           40980342-40980444,40980550-40980601,40980716-40980756,
           40980881-40980960,40981490-40981936,40982378-40982554,
           40983205-40983803,40983886-40985040
          Length = 1227

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
 Frame = -2

Query: 513 PSWDLSE-KDALEFSKQAHLIRKQADTLYKTMKDLFTVPDG 394
           P+W L   +++ EF  Q    R++ +T Y ++KD+   P G
Sbjct: 649 PAWSLGAGENSKEFEVQTQRNRREKETFYASLKDIPLNPKG 689


>01_06_0938 -
           33179237-33179362,33179485-33179668,33180114-33180409,
           33180702-33180821,33180931-33181018,33181352-33181426,
           33181565-33181632,33181770-33181852,33182010-33182058,
           33183006-33183126,33183225-33183310,33183782-33183910,
           33184033-33184155,33184277-33184486,33185217-33185240
          Length = 593

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 12/45 (26%), Positives = 25/45 (55%)
 Frame = -2

Query: 363 VVHFKKITAKLTSDELLEMVHEPLELSTPSPQSMQSAIEAANDED 229
           + H  ++    T + + + +HE L +ST  P+S  S+ +  +D+D
Sbjct: 432 ISHAGQVKMLATKNCIAKGIHEALSMSTVHPESSSSSDDTDDDDD 476


>01_01_1010 -
           7996921-7997673,7999212-7999399,7999688-7999784,
           8000420-8000767,8001130-8001231,8001432-8001501,
           8001747-8001802,8001891-8002010
          Length = 577

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 17/45 (37%), Positives = 23/45 (51%)
 Frame = -2

Query: 447 QADTLYKTMKDLFTVPDGLSFWEFFSARVVHFKKITAKLTSDELL 313
           +AD     + D   V  G  FW FF A  V F+ +T +LT D+ L
Sbjct: 469 EADIAVADLTDEHKVSLGRRFWSFFQACPVVFRWLT-RLTVDDCL 512


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,664,762
Number of Sequences: 37544
Number of extensions: 282303
Number of successful extensions: 680
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 671
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 680
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2232933960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)