Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP11_T7_D12
         (817 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051690-1|AAK93114.1|  475|Drosophila melanogaster LD23804p pro...    82   8e-16
AE014297-4531|AAF57004.1|  475|Drosophila melanogaster CG7946-PA...    82   8e-16
L26502-1|AAB58976.1| 2764|Drosophila melanogaster neurofibromin ...    29   7.6  
L26501-1|AAB58975.1| 2802|Drosophila melanogaster neurofibromin ...    29   7.6  
L26500-1|AAB58977.1| 2802|Drosophila melanogaster neurofibromin ...    29   7.6  
AE014297-3891|AAF56543.3| 2802|Drosophila melanogaster CG8318-PB...    29   7.6  
AE014297-3890|AAX52994.1| 2764|Drosophila melanogaster CG8318-PD...    29   7.6  

>AY051690-1|AAK93114.1|  475|Drosophila melanogaster LD23804p
           protein.
          Length = 475

 Score = 82.2 bits (194), Expect = 8e-16
 Identities = 40/115 (34%), Positives = 66/115 (57%), Gaps = 2/115 (1%)
 Frame = -2

Query: 660 CLCLEKXDTELCLKLLDEFMELEVKPLMLLKHPTCLETVKRMRAYVGNTPSWDLSEKDAL 481
           CL L + +   CL++L++F E+E   LMLL++P C++ ++R+R YVGN   W +   D +
Sbjct: 333 CLGLRRANVGKCLEILEQFKEVEFTKLMLLRNPECVDIMRRLRRYVGNLELWKMDLSDEV 392

Query: 480 EFSKQAHLIRKQADTLYKTMKDLFT-VPDGL-SFWEFFSARVVHFKKITAKLTSD 322
           EF ++A  IRK +  +Y   K LF   P+   +FW  F  +V  +K  T  +  +
Sbjct: 393 EFKERAQTIRKVSSGIYDGFKSLFNPEPESEDNFWIDFCEKVKIYKTYTKNINEN 447


>AE014297-4531|AAF57004.1|  475|Drosophila melanogaster CG7946-PA
           protein.
          Length = 475

 Score = 82.2 bits (194), Expect = 8e-16
 Identities = 40/115 (34%), Positives = 66/115 (57%), Gaps = 2/115 (1%)
 Frame = -2

Query: 660 CLCLEKXDTELCLKLLDEFMELEVKPLMLLKHPTCLETVKRMRAYVGNTPSWDLSEKDAL 481
           CL L + +   CL++L++F E+E   LMLL++P C++ ++R+R YVGN   W +   D +
Sbjct: 333 CLGLRRANVGKCLEILEQFKEVEFTKLMLLRNPECVDIMRRLRRYVGNLELWKMDLSDEV 392

Query: 480 EFSKQAHLIRKQADTLYKTMKDLFT-VPDGL-SFWEFFSARVVHFKKITAKLTSD 322
           EF ++A  IRK +  +Y   K LF   P+   +FW  F  +V  +K  T  +  +
Sbjct: 393 EFKERAQTIRKVSSGIYDGFKSLFNPEPESEDNFWIDFCEKVKIYKTYTKNINEN 447


>L26502-1|AAB58976.1| 2764|Drosophila melanogaster neurofibromin
            protein.
          Length = 2764

 Score = 29.1 bits (62), Expect = 7.6
 Identities = 15/38 (39%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
 Frame = -2

Query: 510  SWDLSEKDALEFSKQAHLIRKQ-ADTLYKTMKDLFTVP 400
            SWD+ ++ AL+F++Q  +   Q A  L+KT +  F+VP
Sbjct: 2526 SWDILDQSALQFARQHKVPTLQNARVLFKTQRS-FSVP 2562


>L26501-1|AAB58975.1| 2802|Drosophila melanogaster neurofibromin
            protein.
          Length = 2802

 Score = 29.1 bits (62), Expect = 7.6
 Identities = 15/38 (39%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
 Frame = -2

Query: 510  SWDLSEKDALEFSKQAHLIRKQ-ADTLYKTMKDLFTVP 400
            SWD+ ++ AL+F++Q  +   Q A  L+KT +  F+VP
Sbjct: 2526 SWDILDQSALQFARQHKVPTLQNARVLFKTQRS-FSVP 2562


>L26500-1|AAB58977.1| 2802|Drosophila melanogaster neurofibromin
            protein.
          Length = 2802

 Score = 29.1 bits (62), Expect = 7.6
 Identities = 15/38 (39%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
 Frame = -2

Query: 510  SWDLSEKDALEFSKQAHLIRKQ-ADTLYKTMKDLFTVP 400
            SWD+ ++ AL+F++Q  +   Q A  L+KT +  F+VP
Sbjct: 2526 SWDILDQSALQFARQHKVPTLQNARVLFKTQRS-FSVP 2562


>AE014297-3891|AAF56543.3| 2802|Drosophila melanogaster CG8318-PB,
            isoform B protein.
          Length = 2802

 Score = 29.1 bits (62), Expect = 7.6
 Identities = 15/38 (39%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
 Frame = -2

Query: 510  SWDLSEKDALEFSKQAHLIRKQ-ADTLYKTMKDLFTVP 400
            SWD+ ++ AL+F++Q  +   Q A  L+KT +  F+VP
Sbjct: 2526 SWDILDQSALQFARQHKVPTLQNARVLFKTQRS-FSVP 2562


>AE014297-3890|AAX52994.1| 2764|Drosophila melanogaster CG8318-PD,
            isoform D protein.
          Length = 2764

 Score = 29.1 bits (62), Expect = 7.6
 Identities = 15/38 (39%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
 Frame = -2

Query: 510  SWDLSEKDALEFSKQAHLIRKQ-ADTLYKTMKDLFTVP 400
            SWD+ ++ AL+F++Q  +   Q A  L+KT +  F+VP
Sbjct: 2526 SWDILDQSALQFARQHKVPTLQNARVLFKTQRS-FSVP 2562


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,749,014
Number of Sequences: 53049
Number of extensions: 492546
Number of successful extensions: 1481
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1389
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1481
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3839531124
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)