Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP11_T7_D11
(895 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_03_0627 - 16342211-16342264,16342332-16342412,16342751-163428... 32 0.54
12_02_0299 - 17051570-17052474,17053542-17053755 28 0.96
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 31 1.2
12_01_0033 - 272848-272943,274026-274169,274264-274375,274521-27... 31 1.6
09_04_0081 - 14400293-14400397,14400953-14401036,14401144-144012... 31 1.6
03_02_0436 + 8427018-8427707,8429005-8429544 30 2.9
02_05_0686 - 30900748-30902167,30903442-30904742 30 2.9
01_03_0005 + 11568545-11569119,11569179-11569191 30 2.9
07_03_1267 + 25318220-25318407,25318674-25318844,25319086-253191... 29 3.8
06_03_1310 + 29238644-29240260 29 3.8
12_02_1111 - 26157796-26160330 29 5.0
07_03_1530 + 27502546-27502671,27503487-27503561,27504670-275047... 29 5.0
07_03_1136 + 24218601-24218734,24218769-24219906 29 5.0
06_02_0257 - 13533689-13533714,13533799-13533925,13534013-135341... 29 5.0
12_02_1174 - 26696869-26698191 29 6.6
11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-25... 29 6.6
04_04_0201 - 23555336-23556008,23556097-23556258,23556353-235572... 29 6.6
03_06_0223 + 32481444-32482436 29 6.6
02_04_0180 + 20696258-20698398,20698691-20698871,20698998-20699060 29 6.6
04_04_0708 - 27441373-27442611 25 7.6
07_01_0080 + 587674-588510 28 8.7
03_05_0067 - 20460206-20460703,20461255-20461530 28 8.7
01_07_0239 + 42222024-42222133,42222220-42222301,42222396-422224... 28 8.7
01_06_1670 - 39007402-39008229,39008320-39008567,39009159-390093... 28 8.7
03_02_0784 - 11154395-11154888,11155284-11155360,11155447-111554... 25 9.7
>05_03_0627 -
16342211-16342264,16342332-16342412,16342751-16342849,
16343660-16343770,16343964-16344116,16344741-16344881,
16345456-16345513,16345852-16345967,16346292-16346405,
16346496-16346557,16348788-16348930,16349030-16349097,
16349200-16349379,16349835-16350013,16350447-16350636,
16350920-16350978,16351421-16351574,16352133-16352158,
16352567-16353014
Length = 811
Score = 32.3 bits (70), Expect = 0.54
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = -3
Query: 491 GGGGXXXPPFFXKXXXPPPPPPR 423
GGGG P K PPPPPPR
Sbjct: 55 GGGGRAPPRAAGKSPAPPPPPPR 77
>12_02_0299 - 17051570-17052474,17053542-17053755
Length = 372
Score = 27.9 bits (59), Expect(2) = 0.96
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = -3
Query: 500 PPXGGGGXXXPPFFXKXXXPPPPPP 426
PP PP F PPPPPP
Sbjct: 271 PPPAFPFPHLPPIFSPPSPPPPPPP 295
Score = 23.8 bits (49), Expect(2) = 4.6
Identities = 11/31 (35%), Positives = 11/31 (35%)
Frame = +2
Query: 617 PXLXPXXXXXRXXSFXXXXXTTXXPPPPXPP 709
P L P SF PPPP PP
Sbjct: 302 PQLPPLPHFPPLPSFYPSPPPPPPPPPPPPP 332
Score = 23.8 bits (49), Expect(2) = 4.6
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +2
Query: 689 PPPPXPPXXXSAXXTPPL 742
PPPP PP PPL
Sbjct: 324 PPPPPPPPPSFPWPFPPL 341
Score = 22.2 bits (45), Expect(2) = 0.96
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -3
Query: 443 PPPPPPRXF 417
PPPPPP F
Sbjct: 326 PPPPPPPSF 334
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = -3
Query: 500 PPXGGGGXXXPPFFXKXXXPPPPPPR 423
PP G G PP PPPPPPR
Sbjct: 1165 PPAGFRGGTPPPNAHGGVAPPPPPPR 1190
Score = 30.7 bits (66), Expect = 1.6
Identities = 18/55 (32%), Positives = 18/55 (32%)
Frame = +1
Query: 430 GGGGGXXXXXKXGGXKXPPPPXGGXXXXXXXXXXXXXXXPXPXXPXAXPXLPPPP 594
G GG GG PPPP G P P P P PPPP
Sbjct: 1168 GFRGGTPPPNAHGGVAPPPPPPRGHGGVGGPPTPPGA--PAPPMPPGVPGGPPPP 1220
Score = 28.3 bits (60), Expect = 8.7
Identities = 17/57 (29%), Positives = 17/57 (29%)
Frame = +3
Query: 423 PGGXGGGXXPFXKKXGXXTPPPXPGGGXXXXXXXXXXXXTXPAPXXPXXXXAPPXXP 593
P G GG P G PPP P G P P P PP P
Sbjct: 1166 PAGFRGGTPPPNAHGGVAPPPPPPRGHGGVGGPPTPPGAPAP-PMPPGVPGGPPPPP 1221
>12_01_0033 -
272848-272943,274026-274169,274264-274375,274521-274702,
274781-274912,275038-276330,279841-280545,280649-280695,
280787-280865
Length = 929
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = -3
Query: 500 PPXGGGGXXXPPFFXKXXXPPPPPPR 423
PP G PP K PPPPPPR
Sbjct: 617 PPRPPGAPPPPPPPGKPGGPPPPPPR 642
>09_04_0081 -
14400293-14400397,14400953-14401036,14401144-14401214,
14401293-14401380,14401487-14401678,14401772-14402704
Length = 490
Score = 30.7 bits (66), Expect = 1.6
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -3
Query: 497 PXGGGGXXXPPFFXKXXXPPPPPP 426
P G G PP K PPPPPP
Sbjct: 133 PRGPGQEPPPPHVPKAAPPPPPPP 156
>03_02_0436 + 8427018-8427707,8429005-8429544
Length = 409
Score = 29.9 bits (64), Expect = 2.9
Identities = 14/28 (50%), Positives = 14/28 (50%), Gaps = 2/28 (7%)
Frame = -3
Query: 491 GGGGXXXPPFF--XKXXXPPPPPPRXFF 414
GGGG PFF P PPPP FF
Sbjct: 99 GGGGGQQSPFFPLLPPLPPQPPPPPPFF 126
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 29.9 bits (64), Expect = 2.9
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = -3
Query: 500 PPXGGGGXXXPPFFXKXXXPPPPPPR 423
PP G PP K PPPPPP+
Sbjct: 358 PPKGPSPPPPPPPGGKKGGPPPPPPK 383
Score = 29.1 bits (62), Expect = 5.0
Identities = 18/65 (27%), Positives = 18/65 (27%)
Frame = +1
Query: 547 PXPXXPXAXPXLPPPPXXAXPXXXPFXTXXXXXXXXVFXPXXXYNXXXPXXPPXXXXFGX 726
P P A P PPPP A P P P P PP G
Sbjct: 317 PPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGG 376
Query: 727 TDPAP 741
P P
Sbjct: 377 PPPPP 381
>01_03_0005 + 11568545-11569119,11569179-11569191
Length = 195
Score = 29.9 bits (64), Expect = 2.9
Identities = 20/65 (30%), Positives = 20/65 (30%)
Frame = +1
Query: 430 GGGGGXXXXXKXGGXKXPPPPXGGXXXXXXXXXXXXXXXPXPXXPXAXPXLPPPPXXAXP 609
GGGGG GG PPP GG P P P LP P
Sbjct: 99 GGGGGSSTGG--GGIYYPPPTGGGGGGGGGWQQGGGGGGAYPTPPPPNPFLPYFPFYYYS 156
Query: 610 XXXPF 624
PF
Sbjct: 157 PPPPF 161
Score = 28.7 bits (61), Expect = 6.6
Identities = 17/67 (25%), Positives = 18/67 (26%)
Frame = +2
Query: 308 PPPPPXXXXXPXXXXXXXXXXXXXXXXXXXLFFFXKKXPGGXGGGXGPXXXKXGAXNXPP 487
PPPPP P + P GGG G G PP
Sbjct: 57 PPPPPVVTPTPQCPPPPSYPSGGGGGGGGGTVMYTSPPPPYSGGGGGSSTGGGGIYYPPP 116
Query: 488 XPXGGXG 508
GG G
Sbjct: 117 TGGGGGG 123
>07_03_1267 +
25318220-25318407,25318674-25318844,25319086-25319188,
25319394-25319885,25320723-25321156,25321333-25321388,
25321711-25321775,25322139-25322147
Length = 505
Score = 29.5 bits (63), Expect = 3.8
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -3
Query: 500 PPXGGGGXXXPPFFXKXXXPPPP 432
P GGGG PP+ PPPP
Sbjct: 77 PDGGGGGEMPPPYGGAAAAPPPP 99
Score = 28.7 bits (61), Expect = 6.6
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -3
Query: 497 PXGGGGXXXPPFFXKXXXPPPPP 429
P GGGG PP + PPPP
Sbjct: 77 PDGGGGGEMPPPYGGAAAAPPPP 99
>06_03_1310 + 29238644-29240260
Length = 538
Score = 29.5 bits (63), Expect = 3.8
Identities = 13/26 (50%), Positives = 13/26 (50%), Gaps = 1/26 (3%)
Frame = -3
Query: 500 PPXGGGGXXX-PPFFXKXXXPPPPPP 426
PP GGGG PP PPPPP
Sbjct: 487 PPQGGGGKLPFPPVHGVAYSSPPPPP 512
>12_02_1111 - 26157796-26160330
Length = 844
Score = 29.1 bits (62), Expect = 5.0
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -3
Query: 467 PFFXKXXXPPPPPP 426
PFF K PPPPPP
Sbjct: 234 PFFTKENLPPPPPP 247
>07_03_1530 + 27502546-27502671,27503487-27503561,27504670-27504746,
27505576-27507522,27508478-27508946,27509898-27510079,
27510746-27511208,27511295-27511691,27511810-27511937,
27512106-27512273,27512452-27512559,27512830-27512838
Length = 1382
Score = 29.1 bits (62), Expect = 5.0
Identities = 15/53 (28%), Positives = 17/53 (32%)
Frame = +1
Query: 547 PXPXXPXAXPXLPPPPXXAXPXXXPFXTXXXXXXXXVFXPXXXYNXXXPXXPP 705
P P P P PP P + P P V P Y+ P PP
Sbjct: 1163 PLPPPPPVAPFHPPGPHFSGPSVPPHHGNNYHQPPSVPPPNNAYHLQPPPHPP 1215
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 29.1 bits (62), Expect = 5.0
Identities = 15/33 (45%), Positives = 15/33 (45%), Gaps = 4/33 (12%)
Frame = +2
Query: 422 PGGXGGGXGPXXXKXGAXNX----PPXPXGGXG 508
P G GGG GP GA PP P GG G
Sbjct: 108 PPGGGGGGGPPSLPPGAGGGGGARPPAPGGGGG 140
Score = 28.7 bits (61), Expect = 6.6
Identities = 14/32 (43%), Positives = 15/32 (46%), Gaps = 3/32 (9%)
Frame = +3
Query: 417 KXPGGXGGGXXPFXKKX---GXXTPPPXPGGG 503
+ PGG GGG P G PP PGGG
Sbjct: 107 RPPGGGGGGGPPSLPPGAGGGGGARPPAPGGG 138
>06_02_0257 -
13533689-13533714,13533799-13533925,13534013-13534121,
13534193-13534272,13534758-13534979,13536070-13536318,
13537032-13537484,13539834-13540556
Length = 662
Score = 29.1 bits (62), Expect = 5.0
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -3
Query: 500 PPXGGGGXXXPPFFXKXXXPPPPPP 426
PP GGGG F PPPPP
Sbjct: 43 PPGGGGGDRRGGFQLPPDAAPPPPP 67
>12_02_1174 - 26696869-26698191
Length = 440
Score = 28.7 bits (61), Expect = 6.6
Identities = 14/47 (29%), Positives = 14/47 (29%)
Frame = +1
Query: 481 PPPPXGGXXXXXXXXXXXXXXXPXPXXPXAXPXLPPPPXXAXPXXXP 621
PPPP P P P P PPPP P P
Sbjct: 126 PPPPRTRTRVEPPHRPPPVKPQPPPSLPPPPPPPPPPPPPRPPSVKP 172
>11_01_0035 -
256087-256185,256287-256430,256521-256632,256777-256958,
257038-257169,257297-258589,259133-259837,260465-260549,
260604-260650,260810-260900,261838-262101,262195-262309,
262455-262570,262713-262847,262969-263036,263292-263411
Length = 1235
Score = 28.7 bits (61), Expect = 6.6
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -3
Query: 500 PPXGGGGXXXPPFFXKXXXPPPPPP 426
PP G PP K PPPPPP
Sbjct: 922 PPRPPGAPPPPPPPGKPGGPPPPPP 946
>04_04_0201 - 23555336-23556008,23556097-23556258,23556353-23557206,
23557452-23557613,23558197-23558649,23559729-23559788,
23559983-23560058,23561546-23561593,23561948-23562022,
23562067-23562494
Length = 996
Score = 28.7 bits (61), Expect = 6.6
Identities = 17/57 (29%), Positives = 17/57 (29%)
Frame = +1
Query: 424 RGGGGGGXXXXXKXGGXKXPPPPXGGXXXXXXXXXXXXXXXPXPXXPXAXPXLPPPP 594
R GGG G G PPPP P P P PPPP
Sbjct: 857 RLGGGCGAAPFPPHFGLHLPPPPPRDPLAPMSNFPYSLGHAPSPALRGLPPPPPPPP 913
>03_06_0223 + 32481444-32482436
Length = 330
Score = 28.7 bits (61), Expect = 6.6
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +1
Query: 427 GGGGGGXXXXXKXGGXKXPPPP 492
GGGGGG GG + PPP
Sbjct: 13 GGGGGGDGDIESGGGVEMAPPP 34
>02_04_0180 + 20696258-20698398,20698691-20698871,20698998-20699060
Length = 794
Score = 28.7 bits (61), Expect = 6.6
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = -3
Query: 491 GGGGXXXPPFFXKXXXPPPPPP 426
GGGG P + PPPPPP
Sbjct: 22 GGGGAGYPRGHKQLYAPPPPPP 43
>04_04_0708 - 27441373-27442611
Length = 412
Score = 24.6 bits (51), Expect(2) = 7.6
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = -3
Query: 470 PPFFXKXXXPPPPPP 426
PP PPPPPP
Sbjct: 237 PPLLPPPPPPPPPPP 251
Score = 22.2 bits (45), Expect(2) = 7.6
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -3
Query: 443 PPPPPPRXF 417
PPPPPP F
Sbjct: 244 PPPPPPPPF 252
>07_01_0080 + 587674-588510
Length = 278
Score = 28.3 bits (60), Expect = 8.7
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -3
Query: 500 PPXGGGGXXXPPFFXKXXXPPPPPPRXF 417
PP G PP PPPPPP F
Sbjct: 96 PPPPSSGSPPPPPPPPPPPPPPPPPPLF 123
>03_05_0067 - 20460206-20460703,20461255-20461530
Length = 257
Score = 28.3 bits (60), Expect = 8.7
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -3
Query: 500 PPXGGGGXXXPPFFXKXXXPPPPPPRXF 417
PP G PP + + PPPPPP+ F
Sbjct: 7 PPQWAMGPPPPPQYFQAG-PPPPPPQYF 33
>01_07_0239 +
42222024-42222133,42222220-42222301,42222396-42222486,
42222702-42222814,42222912-42222984,42223080-42223178,
42223201-42223406,42223693-42223832,42223912-42223969,
42224067-42224137,42224207-42224741
Length = 525
Score = 28.3 bits (60), Expect = 8.7
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +2
Query: 425 GGXGGGXGPXXXKXGAXNXPPXPXGGXG 508
GG GGG G PP P GG G
Sbjct: 446 GGQGGGYGSGPYPQQGRGPPPYPGGGMG 473
>01_06_1670 -
39007402-39008229,39008320-39008567,39009159-39009364,
39009454-39011054
Length = 960
Score = 28.3 bits (60), Expect = 8.7
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -3
Query: 500 PPXGGGGXXXPPFFXKXXXPPPPP 429
PP PPFF PPPPP
Sbjct: 48 PPTPAPPGPAPPFFPALPVPPPPP 71
>03_02_0784 -
11154395-11154888,11155284-11155360,11155447-11155497,
11155599-11155672,11156127-11156215,11156533-11156618,
11157570-11157669,11158540-11158622,11158776-11159194
Length = 490
Score = 25.0 bits (52), Expect(2) = 9.7
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = -3
Query: 470 PPFFXKXXXPPPPPP 426
PP+ PPPPPP
Sbjct: 424 PPYAPPPPPPPPPPP 438
Score = 21.4 bits (43), Expect(2) = 9.7
Identities = 6/7 (85%), Positives = 7/7 (100%)
Frame = -3
Query: 443 PPPPPPR 423
PPPPPP+
Sbjct: 434 PPPPPPQ 440
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,001,687
Number of Sequences: 37544
Number of extensions: 422481
Number of successful extensions: 7040
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 2211
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5991
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2518669100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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