Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP11_T7_D11
         (895 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U34051-1|AAC50278.1|  367|Homo sapiens cyclin-dependent kinase 5...    31   5.6  
DQ307839-1|ABB96255.1|  367|Homo sapiens cyclin-dependent kinase...    31   5.6  
BC041771-1|AAH41771.1|  367|Homo sapiens cyclin-dependent kinase...    31   5.6  
AC097468-1|AAX88916.1|  367|Homo sapiens unknown protein.              31   5.6  
AB028952-1|BAA82981.2| 1015|Homo sapiens KIAA1029 protein protein.     26   6.8  
AF499137-1|AAQ07403.1|  903|Homo sapiens synaptopodin protein.         26   6.9  
AF499136-1|AAQ07402.1|  903|Homo sapiens synaptopodin protein.         26   6.9  
BC038446-1|AAH38446.1|  673|Homo sapiens SF1 protein protein.          30   9.9  

>U34051-1|AAC50278.1|  367|Homo sapiens cyclin-dependent kinase 5
           activator isoform p39i protein.
          Length = 367

 Score = 31.1 bits (67), Expect = 5.6
 Identities = 12/25 (48%), Positives = 12/25 (48%)
 Frame = -3

Query: 500 PPXGGGGXXXPPFFXKXXXPPPPPP 426
           PP GG     PP       PPPPPP
Sbjct: 137 PPSGGSAAAQPPGSGGGKPPPPPPP 161


>DQ307839-1|ABB96255.1|  367|Homo sapiens cyclin-dependent kinase 5,
           regulatory subunit 2 (p39) protein.
          Length = 367

 Score = 31.1 bits (67), Expect = 5.6
 Identities = 12/25 (48%), Positives = 12/25 (48%)
 Frame = -3

Query: 500 PPXGGGGXXXPPFFXKXXXPPPPPP 426
           PP GG     PP       PPPPPP
Sbjct: 137 PPSGGSAAAQPPGSGGGKPPPPPPP 161


>BC041771-1|AAH41771.1|  367|Homo sapiens cyclin-dependent kinase 5,
           regulatory subunit 2 (p39) protein.
          Length = 367

 Score = 31.1 bits (67), Expect = 5.6
 Identities = 12/25 (48%), Positives = 12/25 (48%)
 Frame = -3

Query: 500 PPXGGGGXXXPPFFXKXXXPPPPPP 426
           PP GG     PP       PPPPPP
Sbjct: 137 PPSGGSAAAQPPGSGGGKPPPPPPP 161


>AC097468-1|AAX88916.1|  367|Homo sapiens unknown protein.
          Length = 367

 Score = 31.1 bits (67), Expect = 5.6
 Identities = 12/25 (48%), Positives = 12/25 (48%)
 Frame = -3

Query: 500 PPXGGGGXXXPPFFXKXXXPPPPPP 426
           PP GG     PP       PPPPPP
Sbjct: 137 PPSGGSAAAQPPGSGGGKPPPPPPP 161


>AB028952-1|BAA82981.2| 1015|Homo sapiens KIAA1029 protein protein.
          Length = 1015

 Score = 26.2 bits (55), Expect(2) = 6.8
 Identities = 10/24 (41%), Positives = 10/24 (41%)
 Frame = -3

Query: 497 PXGGGGXXXPPFFXKXXXPPPPPP 426
           P   G     PF      PPPPPP
Sbjct: 884 PRSAGAENPRPFSPPRAPPPPPPP 907



 Score = 23.0 bits (47), Expect(2) = 6.8
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = -3

Query: 443 PPPPPPR 423
           PPPPPPR
Sbjct: 907 PPPPPPR 913


>AF499137-1|AAQ07403.1|  903|Homo sapiens synaptopodin protein.
          Length = 903

 Score = 26.2 bits (55), Expect(2) = 6.9
 Identities = 10/24 (41%), Positives = 10/24 (41%)
 Frame = -3

Query: 497 PXGGGGXXXPPFFXKXXXPPPPPP 426
           P   G     PF      PPPPPP
Sbjct: 772 PRSAGAENPRPFSPPRAPPPPPPP 795



 Score = 23.0 bits (47), Expect(2) = 6.9
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = -3

Query: 443 PPPPPPR 423
           PPPPPPR
Sbjct: 795 PPPPPPR 801


>AF499136-1|AAQ07402.1|  903|Homo sapiens synaptopodin protein.
          Length = 903

 Score = 26.2 bits (55), Expect(2) = 6.9
 Identities = 10/24 (41%), Positives = 10/24 (41%)
 Frame = -3

Query: 497 PXGGGGXXXPPFFXKXXXPPPPPP 426
           P   G     PF      PPPPPP
Sbjct: 772 PRSAGAENPRPFSPPRAPPPPPPP 795



 Score = 23.0 bits (47), Expect(2) = 6.9
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = -3

Query: 443 PPPPPPR 423
           PPPPPPR
Sbjct: 795 PPPPPPR 801


>BC038446-1|AAH38446.1|  673|Homo sapiens SF1 protein protein.
          Length = 673

 Score = 30.3 bits (65), Expect = 9.9
 Identities = 13/38 (34%), Positives = 13/38 (34%)
 Frame = +1

Query: 481 PPPPXGGXXXXXXXXXXXXXXXPXPXXPXAXPXLPPPP 594
           PPPP G                P P  P   P  PPPP
Sbjct: 49  PPPPVGSMGALTAAFPFAALPPPPPPPPPPPPQQPPPP 86


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,704,410
Number of Sequences: 237096
Number of extensions: 1806477
Number of successful extensions: 20317
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4531
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16069
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11492727354
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)