Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP11_T7_D08
         (834 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0130 - 963856-965454                                             30   2.6  

>07_01_0130 - 963856-965454
          Length = 532

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
 Frame = -3

Query: 268 KQTHYSEY*YSHDNFKLRLYASFLRKIYHRMNDRIKSLMNLSEFKTRDQNRFPIGA--HG 95
           +Q  Y  Y Y  D+F  R   +   +I    ND++   + LS+F +  + R PIG   HG
Sbjct: 83  RQDMYRGY-YILDSF--RFPEAHEEEIMSENNDKVSYSLALSKFNSAKRARIPIGTRRHG 139

Query: 94  VRGQ 83
            RG+
Sbjct: 140 DRGE 143


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,474,336
Number of Sequences: 37544
Number of extensions: 231972
Number of successful extensions: 433
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 423
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 433
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2303447664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)