Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP11_T7_D02
         (859 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z37983-1|CAA86061.1|  276|Caenorhabditis elegans Hypothetical pr...    64   9e-11
AF100657-4|AAK70655.2|  261|Caenorhabditis elegans Hypothetical ...    31   0.79 
AF125964-1|AAD14753.1|  471|Caenorhabditis elegans Hypothetical ...    29   5.6  

>Z37983-1|CAA86061.1|  276|Caenorhabditis elegans Hypothetical
           protein B0393.1 protein.
          Length = 276

 Score = 64.5 bits (150), Expect = 9e-11
 Identities = 30/72 (41%), Positives = 41/72 (56%), Gaps = 5/72 (6%)
 Frame = -2

Query: 543 FVXHRLPIRFVDTAIPCNTKXSHXIGLXXWLLTREVLRLRGVXPRDQRW-----DXXXDL 379
           FV    P++ +D  +PCN K    IGL  W+L RE+L LRG   R   +     +   DL
Sbjct: 147 FVNTESPLKLIDIGVPCNNKGERSIGLMWWMLAREILILRGKISRQTGFVLEGKEIMPDL 206

Query: 378 FFYRDPEESEKD 343
           +FYRDP E+EK+
Sbjct: 207 YFYRDPTETEKE 218


>AF100657-4|AAK70655.2|  261|Caenorhabditis elegans Hypothetical
           protein F52C12.2 protein.
          Length = 261

 Score = 31.5 bits (68), Expect = 0.79
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = -3

Query: 383 ICSSTVTLKKVKRMPRXAPAAPEHHLQPDLIVXTSLHY 270
           +C    + K+V+R P     APEH L P L+   S++Y
Sbjct: 122 LCVVDCSWKEVERTPLHRVKAPEHRLLPYLVAANSVNY 159


>AF125964-1|AAD14753.1|  471|Caenorhabditis elegans Hypothetical
           protein W03G1.5 protein.
          Length = 471

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 14/36 (38%), Positives = 15/36 (41%)
 Frame = +3

Query: 318 RSGXGGARHPFHFLQGHGRRTNXPXXPXAGHGEXHH 425
           RSG  G RH      GHG R+  P       G  HH
Sbjct: 245 RSGSPGGRHGHGGHGGHGSRSGSPGGRHGHGGSGHH 280


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,991,306
Number of Sequences: 27780
Number of extensions: 116606
Number of successful extensions: 151
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 144
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 150
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2139963672
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)