Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP11_T7_C23
(829 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23139-15|AAK31488.1| 387|Caenorhabditis elegans Hypothetical p... 206 2e-53
Z81086-2|CAB03121.3| 1045|Caenorhabditis elegans Hypothetical pr... 29 5.4
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 29 5.4
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 29 5.4
AF040660-8|AAN65288.1| 594|Caenorhabditis elegans Hypothetical ... 29 5.4
AF040660-7|AAN65287.1| 366|Caenorhabditis elegans Hypothetical ... 29 5.4
AF040660-6|AAN65286.1| 541|Caenorhabditis elegans Hypothetical ... 29 5.4
AF040660-5|AAC71149.1| 651|Caenorhabditis elegans Hypothetical ... 29 5.4
Z81512-1|CAB04173.1| 601|Caenorhabditis elegans Hypothetical pr... 28 7.1
AL021448-1|CAA16276.2| 898|Caenorhabditis elegans Hypothetical ... 28 9.4
AF233290-1|AAF62516.1| 898|Caenorhabditis elegans maternal-effe... 28 9.4
>U23139-15|AAK31488.1| 387|Caenorhabditis elegans Hypothetical
protein F13H8.7 protein.
Length = 387
Score = 206 bits (502), Expect = 2e-53
Identities = 101/200 (50%), Positives = 122/200 (61%)
Frame = -3
Query: 722 TGNXIGKHRKTTFRESAILTNPTTTWKVTPAILYSRPDTARFAVNXCFGRHHVLNWMMFG 543
TG IG+ RK T + T R +N C+GRHH NWMM+
Sbjct: 189 TGRVIGRSRKNHIPRVGDFNESTYYMESTLGHPVFETKYGRIGINICYGRHHPQNWMMYA 248
Query: 542 QNGAEIVFNPSATIAGEGGSEYMWNVEARNAAITNCYFTAAINRVGYEEFPNEFTSADGK 363
NGAEI+FNPSAT+ SE +W +EARNAAI N FT INRVG E FPNEFTS +G+
Sbjct: 249 LNGAEIIFNPSATVGAL--SEPLWGIEARNAAIANHVFTVGINRVGTEVFPNEFTSGNGQ 306
Query: 362 PAHKDLGLFYGSSYFCGPDGVRCPGLSRTRDGLLIAAVDLNLNRQIRDRCCYYMTQRLDM 183
PAHKD G FYGSSY PDG R P LSR R+G+LIA +DLNL RQ +D + MT RLDM
Sbjct: 307 PAHKDFGHFYGSSYIAAPDGSRTPALSRVREGVLIAELDLNLCRQCKDAWGFRMTNRLDM 366
Query: 182 YVNSLSKVLELDYKPQVVHE 123
Y +++V DY+P + E
Sbjct: 367 YAQKITEVSNPDYRPDIRRE 386
>Z81086-2|CAB03121.3| 1045|Caenorhabditis elegans Hypothetical
protein F53B6.2a protein.
Length = 1045
Score = 28.7 bits (61), Expect = 5.4
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +2
Query: 173 CSRTCPGVGSCNNNICL*SVCSGSSPRPRLTSRLWC 280
C++TC G S CL S CSG S R ++ ++ C
Sbjct: 35 CTKTCGGGVSRQLRRCLTSKCSGESVRFKVCAQKTC 70
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 28.7 bits (61), Expect = 5.4
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -2
Query: 732 SLGHRKRDREASQDHIP-RVGDFNESNYYMEGNTG 631
S GH+KRDR+ S+DH +G + + G +G
Sbjct: 10582 SEGHKKRDRKESEDHDENNLGKSGKDEFATSGESG 10616
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 28.7 bits (61), Expect = 5.4
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -2
Query: 732 SLGHRKRDREASQDHIP-RVGDFNESNYYMEGNTG 631
S GH+KRDR+ S+DH +G + + G +G
Sbjct: 10582 SEGHKKRDRKESEDHDENNLGKSGKDEFATSGESG 10616
>AF040660-8|AAN65288.1| 594|Caenorhabditis elegans Hypothetical
protein W05G11.6d protein.
Length = 594
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/56 (30%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Frame = -3
Query: 557 WMMFGQNGAEIVFNPSATIAGEG-GSEYMWNVEARNAAITNCYFTAAINRVGYEEF 393
WM FG +G NP A G G+ + N A + N FT E F
Sbjct: 332 WMKFGADGRLYAINPEAGFFGVAPGTSHKTNAMAMESCRANTIFTNVAETADGEYF 387
>AF040660-7|AAN65287.1| 366|Caenorhabditis elegans Hypothetical
protein W05G11.6c protein.
Length = 366
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/56 (30%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Frame = -3
Query: 557 WMMFGQNGAEIVFNPSATIAGEG-GSEYMWNVEARNAAITNCYFTAAINRVGYEEF 393
WM FG +G NP A G G+ + N A + N FT E F
Sbjct: 47 WMKFGADGRLYAINPEAGFFGVAPGTSHKTNAMAMESCRANTIFTNVAETADGEYF 102
>AF040660-6|AAN65286.1| 541|Caenorhabditis elegans Hypothetical
protein W05G11.6b protein.
Length = 541
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/56 (30%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Frame = -3
Query: 557 WMMFGQNGAEIVFNPSATIAGEG-GSEYMWNVEARNAAITNCYFTAAINRVGYEEF 393
WM FG +G NP A G G+ + N A + N FT E F
Sbjct: 222 WMKFGADGRLYAINPEAGFFGVAPGTSHKTNAMAMESCRANTIFTNVAETADGEYF 277
>AF040660-5|AAC71149.1| 651|Caenorhabditis elegans Hypothetical
protein W05G11.6a protein.
Length = 651
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/56 (30%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Frame = -3
Query: 557 WMMFGQNGAEIVFNPSATIAGEG-GSEYMWNVEARNAAITNCYFTAAINRVGYEEF 393
WM FG +G NP A G G+ + N A + N FT E F
Sbjct: 332 WMKFGADGRLYAINPEAGFFGVAPGTSHKTNAMAMESCRANTIFTNVAETADGEYF 387
>Z81512-1|CAB04173.1| 601|Caenorhabditis elegans Hypothetical
protein F25C8.1 protein.
Length = 601
Score = 28.3 bits (60), Expect = 7.1
Identities = 10/40 (25%), Positives = 23/40 (57%)
Frame = +3
Query: 459 SFNVPHVLAAAFSGDRR*RIKNDLSSILSEHHPVQDVVPS 578
SFNV + + G++R + + ++ + +H +QD+ P+
Sbjct: 21 SFNVDKLTEYYYGGEKRLKARREVEKCVEDHKELQDLKPT 60
>AL021448-1|CAA16276.2| 898|Caenorhabditis elegans Hypothetical
protein Y2H9A.1 protein.
Length = 898
Score = 27.9 bits (59), Expect = 9.4
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -2
Query: 717 KRDREASQDHIPRVGDFNESNYYMEGNTGHPVFATRYGKI 598
K +++ D + DF ++Y ME + G V A RYG I
Sbjct: 573 KAEKKRRLDSVSISRDFQANHYMMELHKGLTVDAARYGNI 612
>AF233290-1|AAF62516.1| 898|Caenorhabditis elegans maternal-effect
sterile 4 protein.
Length = 898
Score = 27.9 bits (59), Expect = 9.4
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -2
Query: 717 KRDREASQDHIPRVGDFNESNYYMEGNTGHPVFATRYGKI 598
K +++ D + DF ++Y ME + G V A RYG I
Sbjct: 573 KAEKKRRLDSVSISRDFQANHYMMELHKGLTVDAARYGNI 612
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,321,947
Number of Sequences: 27780
Number of extensions: 384712
Number of successful extensions: 1135
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1077
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1133
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2050970610
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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