Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP11_T7_C21
(807 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC22A12.08c |||cardiolipin synthase/ hydrolase fusion protein ... 29 1.0
SPAC2F3.04c |rim1||mitochondrial single-stranded DNA binding pro... 28 1.8
SPBC26H8.04c |||DEP domain|Schizosaccharomyces pombe|chr 2|||Manual 27 4.1
SPBC106.01 |mph1|SPBC1271.16c, SPBC243.01|dual specificity prote... 27 4.1
SPAC24C9.06c |||aconitate hydratase|Schizosaccharomyces pombe|ch... 26 5.5
SPCC364.01 |||sequence orphan|Schizosaccharomyces pombe|chr 3|||... 26 5.5
SPAC1250.03 |ubc14||ubiquitin conjugating enzyme Ubc14|Schizosac... 26 5.5
SPAC458.03 |||nuclear telomere cap complex subunit |Schizosaccha... 26 7.2
SPAC57A7.07c |||homocysteine methyltransferase |Schizosaccharomy... 25 9.6
SPCC285.16c |msh6||MutS protein homolog|Schizosaccharomyces pomb... 25 9.6
SPAC13G7.10 |mug152||transcription factor |Schizosaccharomyces p... 25 9.6
SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyc... 25 9.6
SPBC29A3.14c |trt1||telomerase reverse transcriptase 1 protein T... 25 9.6
SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces pombe... 25 9.6
>SPAC22A12.08c |||cardiolipin synthase/ hydrolase fusion protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 570
Score = 28.7 bits (61), Expect = 1.0
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +3
Query: 102 RNMARIYQLAVGLGGRERSLNRCREKSSFVVLKNRPDVVVRYG 230
R +A Y+ + LGG++ S+ EK F + N DV+ + G
Sbjct: 112 RALADKYKHVLVLGGKDNSVRETAEKYGFKSVINELDVIAKLG 154
>SPAC2F3.04c |rim1||mitochondrial single-stranded DNA binding
protein Rim1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 150
Score = 27.9 bits (59), Expect = 1.8
Identities = 15/55 (27%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Frame = -2
Query: 254 YFSTPPFDTVSYDNIRTVLKDNKTALLSA-SIQASLPS-SETYRQLVDPRHVSSD 96
+ S FD+ ++D ++T+L+ + A ++ S+P+ +E + + RHVS+D
Sbjct: 66 FHSVYVFDSYNFDRLQTILRKGTRVYVEADAVWRSVPAGNEGSQAKMSLRHVSAD 120
>SPBC26H8.04c |||DEP domain|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1496
Score = 26.6 bits (56), Expect = 4.1
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = -1
Query: 696 AXXGTSTRSSNPRFHTPTTPR-LNIHFHQSPDAVXEGVRAGVKPPXSSEAPSAYLTPSSL 520
A T T S+NP T R + I ++ D+ +A PP +++ P +L P+S
Sbjct: 683 ALPATVTTSANPLGFKSTIQRPIPIKNNEDSDSCKAFSQA---PPIATKKPPTFLKPNSP 739
Query: 519 GMAKGVSP 496
AK V P
Sbjct: 740 EYAKTVIP 747
>SPBC106.01 |mph1|SPBC1271.16c, SPBC243.01|dual specificity protein
kinase Mph1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 678
Score = 26.6 bits (56), Expect = 4.1
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = -3
Query: 685 YINPIIKSPIPYTNHPQT*HP 623
Y+ P+ K P+P + H HP
Sbjct: 609 YLTPLAKKPLPVSGHTNNAHP 629
>SPAC24C9.06c |||aconitate hydratase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 778
Score = 26.2 bits (55), Expect = 5.5
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -2
Query: 266 DPSCYFSTPPFDTVSYDNIRT 204
DP+ Y PFDTV D + T
Sbjct: 706 DPAAYDKISPFDTVDIDGLTT 726
>SPCC364.01 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 320
Score = 26.2 bits (55), Expect = 5.5
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -2
Query: 209 RTVLKDNKTALLSASIQASLPSSETYRQL 123
R +LKD LS S+ SLPS T Q+
Sbjct: 57 RKILKDVSLKRLSKSLDRSLPSENTIDQI 85
>SPAC1250.03 |ubc14||ubiquitin conjugating enzyme
Ubc14|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 26.2 bits (55), Expect = 5.5
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -2
Query: 467 KLRALLVVIPRILRSPPPTHPLIEDV 390
KLR++L I ++LR P P PL+ +
Sbjct: 105 KLRSVLEQILQLLREPNPDDPLVASI 130
>SPAC458.03 |||nuclear telomere cap complex subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 868
Score = 25.8 bits (54), Expect = 7.2
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -1
Query: 144 LRDLPPVGRSSPCFFRLLWSLRKILIPYSSQFW 46
L++L +G SPC RL L +++P FW
Sbjct: 21 LKELQHIGVPSPCNLRLYHELISVIVP---TFW 50
>SPAC57A7.07c |||homocysteine methyltransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 308
Score = 25.4 bits (53), Expect = 9.6
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = -2
Query: 332 LVTHKELALKVSSIIGTRVYVFDPSCY 252
+V H E LKV II T Y D S Y
Sbjct: 37 VVKHHEEFLKVCDIISTFTYQLDASIY 63
>SPCC285.16c |msh6||MutS protein homolog|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1254
Score = 25.4 bits (53), Expect = 9.6
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 91 KESEETWRGSTNWR*VSEEG 150
KE E W + NW+ SEEG
Sbjct: 809 KEELEAWTRAFNWQKASEEG 828
>SPAC13G7.10 |mug152||transcription factor |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 390
Score = 25.4 bits (53), Expect = 9.6
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -3
Query: 472 ITSFAPY*SSFHAYSAPLLQLTPSSKTSS 386
+ SF PY S F A P L ++PS+ +S
Sbjct: 302 LQSFHPYESLFSAGQPPSLPISPSTSQNS 330
>SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1238
Score = 25.4 bits (53), Expect = 9.6
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -2
Query: 191 NKTALLSASIQASLPSSETYRQLVDPRHVSSDSFGVY 81
N+ LL I S +SET Q D ++++ + G+Y
Sbjct: 589 NEKELLPEGIPTSHNNSETQAQTADVSNIAASADGIY 625
>SPBC29A3.14c |trt1||telomerase reverse transcriptase 1 protein Trt1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 988
Score = 25.4 bits (53), Expect = 9.6
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = -2
Query: 356 KVKIADNNLVTHKELALKVSSIIGTRVYVFDPSCYFSTPPFDTV 225
K K+ D V K + +S T+ +V + YF PF+ V
Sbjct: 608 KKKLKDPEFVIRKYATIHATSDRATKNFVSEAFSYFDMVPFEKV 651
>SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 488
Score = 25.4 bits (53), Expect = 9.6
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +3
Query: 117 IYQLAVGLGGRERSLNRCREKSSFVVLKNRPDVV 218
++Q A+ LG RS RC KSSF+ + DVV
Sbjct: 33 LHQQAL-LGRNGRSSKRCSPKSSFIRNSPKIDVV 65
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,856,768
Number of Sequences: 5004
Number of extensions: 56783
Number of successful extensions: 170
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 160
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 170
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 392429240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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