Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP11_T7_C07
(795 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U00044-6|AAA50679.2| 670|Caenorhabditis elegans Bard homolog (t... 35 0.077
Z84712-1|CAB06545.1| 297|Caenorhabditis elegans Hypothetical pr... 33 0.24
Z78419-8|CAB01706.1| 297|Caenorhabditis elegans Hypothetical pr... 33 0.24
U28739-10|AAR25656.1| 683|Caenorhabditis elegans Hypothetical p... 33 0.24
Z81586-11|CAF31485.1| 1165|Caenorhabditis elegans Hypothetical p... 30 1.7
U80032-4|AAL16309.2| 1553|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z81129-3|CAB03404.1| 1262|Caenorhabditis elegans Hypothetical pr... 29 2.9
U58761-4|AAB00715.1| 631|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z98853-7|CAB57906.1| 1675|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z75536-4|CAA99832.3| 2271|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z75536-3|CAA99831.3| 2279|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z75530-10|CAA99796.2| 1675|Caenorhabditis elegans Hypothetical p... 28 6.7
AL032632-4|CAA21584.1| 469|Caenorhabditis elegans Hypothetical ... 28 6.7
AF372457-1|AAK54248.1| 2279|Caenorhabditis elegans endocytosis p... 28 6.7
AC025716-1|AAK39606.1| 788|Caenorhabditis elegans Hypothetical ... 28 6.7
Z49207-3|CAA89071.1| 927|Caenorhabditis elegans Hypothetical pr... 28 8.9
>U00044-6|AAA50679.2| 670|Caenorhabditis elegans Bard homolog
(tumor suppressorgene bard1) protein 1 protein.
Length = 670
Score = 34.7 bits (76), Expect = 0.077
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
Frame = -2
Query: 365 EDVGQTKNNDRDFADAPKNLERNNSPPRGIFANIDFHEI---NSWKRPDK-DVHEQKPK 201
+++GQ D D +N E +NSP IF + NS KRP VHE+KPK
Sbjct: 137 DEMGQLGEEDDDLMCKDENRENSNSPELDIFHDYSKEASPTRNSTKRPSTVSVHERKPK 195
>Z84712-1|CAB06545.1| 297|Caenorhabditis elegans Hypothetical
protein F26A3.7 protein.
Length = 297
Score = 33.1 bits (72), Expect = 0.24
Identities = 16/42 (38%), Positives = 26/42 (61%)
Frame = -2
Query: 227 KDVHEQKPKDADGQTEVDKVENVPAPDETYGPKIPDNFKPNL 102
K+V E K ++ + E D+ E+ P ++YGP IP NF+P +
Sbjct: 65 KEVRE-KLQNVENPAEDDE-EDEEFPSQSYGPSIPSNFRPTV 104
>Z78419-8|CAB01706.1| 297|Caenorhabditis elegans Hypothetical
protein F26A3.7 protein.
Length = 297
Score = 33.1 bits (72), Expect = 0.24
Identities = 16/42 (38%), Positives = 26/42 (61%)
Frame = -2
Query: 227 KDVHEQKPKDADGQTEVDKVENVPAPDETYGPKIPDNFKPNL 102
K+V E K ++ + E D+ E+ P ++YGP IP NF+P +
Sbjct: 65 KEVRE-KLQNVENPAEDDE-EDEEFPSQSYGPSIPSNFRPTV 104
>U28739-10|AAR25656.1| 683|Caenorhabditis elegans Hypothetical
protein C17G10.6a protein.
Length = 683
Score = 33.1 bits (72), Expect = 0.24
Identities = 39/159 (24%), Positives = 61/159 (38%), Gaps = 3/159 (1%)
Frame = -2
Query: 470 ESEQNKNEGVQVTETINKFDKIDLYKSIFLSDSEDEDVGQTKNNDRD-FADAPKNLERNN 294
E E++ NE + + K K K+ + +D D NN+ + + K + N
Sbjct: 404 EEEEDDNEDDENSRKKKKGRKNGRKKNNEDEEEDDNDEDDDGNNEENGYKKKQKRKKINC 463
Query: 293 SPPRGIFANIDFHEINSWKRPDKDVHEQKPKDADGQT--EVDKVENVPAPDETYGPKIPD 120
PP+ ++ P V P DA G T V +P Y KI D
Sbjct: 464 PPPQREHYQPPQPLPQNYNIPPDQVPYPHP-DAYGYTFPTVTTTTTMPPSYPYYPGKIGD 522
Query: 119 NFKPNLASQTCKQDVTLEIDSSSSSDCWVDANEVKKKKK 3
++ N S CKQ+ ++ D + + KKKKK
Sbjct: 523 DYH-NFESMDCKQERENYEENEDGDDYSEEKKQKKKKKK 560
>Z81586-11|CAF31485.1| 1165|Caenorhabditis elegans Hypothetical
protein T05F1.6 protein.
Length = 1165
Score = 30.3 bits (65), Expect = 1.7
Identities = 29/132 (21%), Positives = 57/132 (43%), Gaps = 5/132 (3%)
Frame = -2
Query: 530 NKTELVGAPKRMTVAELFLKE--SEQNKNEGVQVTETI---NKFDKIDLYKSIFLSDSED 366
N +E +P E F K+ S ++ + + E+I N +K + + + D ++
Sbjct: 107 NDSEKSESPIEEGEGETFEKKIISMDTSDDKLDIAESISVSNDTEKPEENEEKVVGDEDE 166
Query: 365 EDVGQTKNNDRDFADAPKNLERNNSPPRGIFANIDFHEINSWKRPDKDVHEQKPKDADGQ 186
ED+ + +D D +APK + + D HE +S K +++P++ D
Sbjct: 167 EDIDDVQEDDED--EAPK---KKTKKAVSTSDDDDLHEDDSPKGGSVSDEKEEPENEDDT 221
Query: 185 TEVDKVENVPAP 150
E + V +P
Sbjct: 222 EEPENEVEVESP 233
>U80032-4|AAL16309.2| 1553|Caenorhabditis elegans Hypothetical
protein C32E12.4 protein.
Length = 1553
Score = 30.3 bits (65), Expect = 1.7
Identities = 33/159 (20%), Positives = 69/159 (43%), Gaps = 6/159 (3%)
Frame = -2
Query: 575 SVKIDXRPVXITSTSNKTELVGAPKRMTVAELFLKESEQNKN--EGVQVTETINKFDKID 402
SV + +P+ + + V A K+ +V E E+E++ + + TE I+ F
Sbjct: 327 SVSPEMKPLTRSFQMEASFGVSAIKKSSVEETKTFETEKSPEVQKATEPTEKIDNFQSTP 386
Query: 401 LY---KSI-FLSDSEDEDVGQTKNNDRDFADAPKNLERNNSPPRGIFANIDFHEINSWKR 234
+ + + L D+ ED + + K E P + + ++I +IN +
Sbjct: 387 VTAVPRGVPNLVDTSSEDEEEDVEIIKPIEQPEKASEVLVEPIKKVVSSI---KINGIEV 443
Query: 233 PDKDVHEQKPKDADGQTEVDKVENVPAPDETYGPKIPDN 117
D + ++ K+ D + +++VP P + K+P+N
Sbjct: 444 KDVEKTKEDKKEVDSKPVATNIQDVPTPIPSETSKVPEN 482
>Z81129-3|CAB03404.1| 1262|Caenorhabditis elegans Hypothetical
protein T23F1.5 protein.
Length = 1262
Score = 29.5 bits (63), Expect = 2.9
Identities = 15/60 (25%), Positives = 27/60 (45%)
Frame = -2
Query: 467 SEQNKNEGVQVTETINKFDKIDLYKSIFLSDSEDEDVGQTKNNDRDFADAPKNLERNNSP 288
S +N E T N F+ + + I+L S DE+ + + D+P + E++ P
Sbjct: 347 SNENGKETTPFEMTKNPFNDLKTIRPIYLGSSSDEEDDEPLEDISKATDSPHSSEKSQIP 406
>U58761-4|AAB00715.1| 631|Caenorhabditis elegans Hypothetical
protein C01F1.3a protein.
Length = 631
Score = 29.1 bits (62), Expect = 3.8
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Frame = +3
Query: 123 RYFRSVSFVGSRNILDFIDFRLTVRIFGLL--FVNIFIGSLPRVYFVEIDISENTTGR 290
R + + N+L FI F TVR +G + FV+I S VY + D+SEN G+
Sbjct: 95 RCYNETAEAVQNNVLSFIQFLETVRTYGKIKRFVHI---STDEVY-GDSDLSENEQGK 148
>Z98853-7|CAB57906.1| 1675|Caenorhabditis elegans Hypothetical protein
C47E8.8 protein.
Length = 1675
Score = 28.3 bits (60), Expect = 6.7
Identities = 20/69 (28%), Positives = 29/69 (42%), Gaps = 5/69 (7%)
Frame = -2
Query: 194 DGQTEVDKVENVPAPDETYGPKIPDNFKPNLASQ--TCKQDVTLEIDSSSSSDCWVDANE 21
D + DK E P PK+ +N K +ASQ C ++ D + + C +
Sbjct: 1395 DSSDKSDKDERTSCPSSKKRPKLAENKKKFVASQPKRCLSGSNVKSDKNEKAGCSGTKKQ 1454
Query: 20 ---VKKKKK 3
VK KKK
Sbjct: 1455 EKVVKNKKK 1463
>Z75536-4|CAA99832.3| 2271|Caenorhabditis elegans Hypothetical protein
F18C12.2b protein.
Length = 2271
Score = 28.3 bits (60), Expect = 6.7
Identities = 19/71 (26%), Positives = 29/71 (40%), Gaps = 1/71 (1%)
Frame = -2
Query: 653 EXSVHDRDSFAKGQVSFSGSKSLNRESVKIDXRPVXITSTSNKTELVGAPK-RMTVAELF 477
E HD+D+ G +SF KSL E + + L P+ R TV +
Sbjct: 982 EWYYHDKDAKQVGPLSFEKMKSLYTEKTIFEKSQIWAAGMDKWMSLAAVPQFRWTVCQQK 1041
Query: 476 LKESEQNKNEG 444
+ +E N +G
Sbjct: 1042 DQPNEINTGKG 1052
>Z75536-3|CAA99831.3| 2279|Caenorhabditis elegans Hypothetical protein
F18C12.2a protein.
Length = 2279
Score = 28.3 bits (60), Expect = 6.7
Identities = 19/71 (26%), Positives = 29/71 (40%), Gaps = 1/71 (1%)
Frame = -2
Query: 653 EXSVHDRDSFAKGQVSFSGSKSLNRESVKIDXRPVXITSTSNKTELVGAPK-RMTVAELF 477
E HD+D+ G +SF KSL E + + L P+ R TV +
Sbjct: 982 EWYYHDKDAKQVGPLSFEKMKSLYTEKTIFEKSQIWAAGMDKWMSLAAVPQFRWTVCQQK 1041
Query: 476 LKESEQNKNEG 444
+ +E N +G
Sbjct: 1042 DQPNEINTGKG 1052
>Z75530-10|CAA99796.2| 1675|Caenorhabditis elegans Hypothetical
protein C47E8.8 protein.
Length = 1675
Score = 28.3 bits (60), Expect = 6.7
Identities = 20/69 (28%), Positives = 29/69 (42%), Gaps = 5/69 (7%)
Frame = -2
Query: 194 DGQTEVDKVENVPAPDETYGPKIPDNFKPNLASQ--TCKQDVTLEIDSSSSSDCWVDANE 21
D + DK E P PK+ +N K +ASQ C ++ D + + C +
Sbjct: 1395 DSSDKSDKDERTSCPSSKKRPKLAENKKKFVASQPKRCLSGSNVKSDKNEKAGCSGTKKQ 1454
Query: 20 ---VKKKKK 3
VK KKK
Sbjct: 1455 EKVVKNKKK 1463
>AL032632-4|CAA21584.1| 469|Caenorhabditis elegans Hypothetical
protein Y11D7A.8 protein.
Length = 469
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = -2
Query: 170 VENVPAPDETYGPKIPDNFKPNLASQTCKQDVTLEIDSSSSSD 42
+E P+ D PKIP +++P++ S + ++ S + SD
Sbjct: 53 IEPSPSSDVPSDPKIPTSYRPSIISLQIPNEFGDDVSSDALSD 95
>AF372457-1|AAK54248.1| 2279|Caenorhabditis elegans endocytosis
protein RME-8 protein.
Length = 2279
Score = 28.3 bits (60), Expect = 6.7
Identities = 19/71 (26%), Positives = 29/71 (40%), Gaps = 1/71 (1%)
Frame = -2
Query: 653 EXSVHDRDSFAKGQVSFSGSKSLNRESVKIDXRPVXITSTSNKTELVGAPK-RMTVAELF 477
E HD+D+ G +SF KSL E + + L P+ R TV +
Sbjct: 982 EWYYHDKDAKQVGPLSFEKMKSLYTEKTIFEKSQIWAAGMDKWMSLAAVPQFRWTVCQQK 1041
Query: 476 LKESEQNKNEG 444
+ +E N +G
Sbjct: 1042 DQPNEINTGKG 1052
>AC025716-1|AAK39606.1| 788|Caenorhabditis elegans Hypothetical
protein Y39G10AR.11 protein.
Length = 788
Score = 28.3 bits (60), Expect = 6.7
Identities = 36/160 (22%), Positives = 72/160 (45%), Gaps = 3/160 (1%)
Frame = -2
Query: 473 KESEQNKNEGVQVTETINKFDKIDLYKSIFLSDSEDEDVGQTKNND-RDFADAPKNLERN 297
K++ Q E + +T+ +F +++ L E E + + +++ RD + KNL
Sbjct: 608 KKAHQKMLEADNLRKTV-EFSNMEMTNVKALMAMEREQILEERHSTVRDLEEKLKNLTMT 666
Query: 296 NSPPRGIFANIDFHEINSWKRPDKDVHEQKPKDADGQTEVDKVENVPAPDETYGPKIPDN 117
+S + + A S R +D EQ ++ Q E D++ D+ ++ +
Sbjct: 667 SSINKNLLAEAR----RSIARLTEDAKEQ----SEAQ-EFDRLRWNDQVDQL--KEVNEE 715
Query: 116 FKPNLASQTCKQ--DVTLEIDSSSSSDCWVDANEVKKKKK 3
K NL + + D DSSS SDC D+++ ++ ++
Sbjct: 716 LKKNLGVEVLESSDDSDCSSDSSSDSDCSSDSSDSEEDEE 755
>Z49207-3|CAA89071.1| 927|Caenorhabditis elegans Hypothetical
protein R07E3.6 protein.
Length = 927
Score = 27.9 bits (59), Expect = 8.9
Identities = 14/63 (22%), Positives = 31/63 (49%)
Frame = -2
Query: 476 LKESEQNKNEGVQVTETINKFDKIDLYKSIFLSDSEDEDVGQTKNNDRDFADAPKNLERN 297
L E+E+ + + ++V ++++ ++ID K++ + +DE K + K E
Sbjct: 378 LAENEELEKQAIEVMKSLDDEERIDAEKNVEVQKRKDERNAARKRINNFLKMMQKARENK 437
Query: 296 NSP 288
N P
Sbjct: 438 NKP 440
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,944,340
Number of Sequences: 27780
Number of extensions: 369454
Number of successful extensions: 1218
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1151
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1214
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1935274832
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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