Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP11_T7_C01
(815 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 26 0.48
AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein. 24 1.5
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 24 1.9
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 23 2.6
AY375535-1|AAQ82648.1| 147|Apis mellifera doublesex protein. 23 3.4
DQ435331-1|ABD92646.1| 135|Apis mellifera OBP14 protein. 23 4.5
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 22 5.9
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 22 7.8
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 22 7.8
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 22 7.8
AF144379-1|AAD34586.1| 543|Apis mellifera glutamate transporter... 22 7.8
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 25.8 bits (54), Expect = 0.48
Identities = 23/83 (27%), Positives = 36/83 (43%), Gaps = 1/83 (1%)
Frame = -1
Query: 392 GSVQRAPVHGRSLSRYREGLRPCLACGTDLQAVA-EHGPPARLCATAGVVRGGKILPCRG 216
GSV++ G S R +E R + A+ +H PPA C T V + ++ P
Sbjct: 1234 GSVEKT---GVSTLRGQERQRSLFKDSSPATALMLQHAPPAYSCGTVSVPQQQQLPPSSP 1290
Query: 215 RGRQVVGAPSHGWRSPGKRPGTS 147
+ R V +H +R PG +
Sbjct: 1291 QPRLTV---NHAYRDAVTVPGNN 1310
>AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein.
Length = 615
Score = 24.2 bits (50), Expect = 1.5
Identities = 15/54 (27%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
Frame = -1
Query: 452 RVSQRSLDNAAIGPRYAPLGGSVQRAPVHG-RSLSRYREGLRPCLACGTDLQAV 294
R A +GP Y P+ R VHG R L ++P + G + +V
Sbjct: 540 RAENHQTGTAKMGPSYDPMAVVSPRLKVHGIRGLRVADASVQPQVISGNPVASV 593
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 23.8 bits (49), Expect = 1.9
Identities = 32/159 (20%), Positives = 60/159 (37%), Gaps = 8/159 (5%)
Frame = +2
Query: 143 EDWCQDAS-LGNASRDWAHRRLGALDRDKEGSSLHVRPQQSHIGVLEVRVLQQLVDQSRM 319
ED +D++ L +SR+ G D++ +L PQQ + + QQ Q
Sbjct: 1411 EDSTRDSTKLDRSSREREVHN-GGQQEDRDRKTLTSAPQQPQQQQQQQQQQQQQQQQLNH 1469
Query: 320 PDTVEGLLDIEKD----CGRVLARVGPIRQVVHNADQLQRCRVTAAKPELLGSEKDVRRH 487
+ L + D C L ++ Q Q+ + +P+ + ++
Sbjct: 1470 YPDLHNLYAVPTDKKSACDSKLIVDHSSQKTQQQQPQQQQQQQQQQQPQQQSQQPQQQQP 1529
Query: 488 PSQQQPLEQLAHMRQQSDR---TITGGISPILAGFGQGN 595
QQQ +Q QQ + ++G + + G+ GN
Sbjct: 1530 QPQQQQQQQQQQQPQQQQKEYGAVSGLVVQLQRGYNSGN 1568
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 23.4 bits (48), Expect = 2.6
Identities = 11/34 (32%), Positives = 15/34 (44%)
Frame = -1
Query: 197 GAPSHGWRSPGKRPGTSPLRSLHQRHSHARGQPP 96
G PS SP + PGT + + H R + P
Sbjct: 129 GPPSVSLSSPPREPGTPRINFTKLKRHHPRYKRP 162
>AY375535-1|AAQ82648.1| 147|Apis mellifera doublesex protein.
Length = 147
Score = 23.0 bits (47), Expect = 3.4
Identities = 6/27 (22%), Positives = 18/27 (66%)
Frame = +2
Query: 422 QRCRVTAAKPELLGSEKDVRRHPSQQQ 502
++C++TA + +++ ++RH +Q +
Sbjct: 7 EKCKITANRQQVMRQNMKLKRHLAQDK 33
>DQ435331-1|ABD92646.1| 135|Apis mellifera OBP14 protein.
Length = 135
Score = 22.6 bits (46), Expect = 4.5
Identities = 7/17 (41%), Positives = 12/17 (70%)
Frame = +2
Query: 302 VDQSRMPDTVEGLLDIE 352
+DQ + D +EG +D+E
Sbjct: 39 IDQQKANDVIEGNIDVE 55
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 22.2 bits (45), Expect = 5.9
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +3
Query: 405 ITRTNCSVVE*PLRNPNCLGLRRMCG 482
I R+N E + PN LGL+ M G
Sbjct: 800 ILRSNVQQCEQLEKAPNTLGLKNMAG 825
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 21.8 bits (44), Expect = 7.8
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = +1
Query: 364 PCTGARWTDPPSGA*RGPIAALSSDRC 444
P T R PP+GA GP ++ C
Sbjct: 404 PVTQKREGGPPTGATTGPNEIVTCTNC 430
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 21.8 bits (44), Expect = 7.8
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = +1
Query: 364 PCTGARWTDPPSGA*RGPIAALSSDRC 444
P T R PP+GA GP ++ C
Sbjct: 424 PVTQKREGGPPTGATTGPNEIVTCTNC 450
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 21.8 bits (44), Expect = 7.8
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = +1
Query: 364 PCTGARWTDPPSGA*RGPIAALSSDRC 444
P T R PP+GA GP ++ C
Sbjct: 373 PVTQKREGGPPTGATTGPNEIVTCTNC 399
>AF144379-1|AAD34586.1| 543|Apis mellifera glutamate transporter
Am-EAAT protein.
Length = 543
Score = 21.8 bits (44), Expect = 7.8
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -2
Query: 562 NPSSYRPITLLSHMGKLFERLLLRRVSPHIL 470
NP+ + ITL+S G+L RLL + P I+
Sbjct: 87 NPTP-QSITLISFPGELLMRLLKMFILPLIV 116
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 231,739
Number of Sequences: 438
Number of extensions: 5594
Number of successful extensions: 14
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25974678
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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