Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP11_T7_B15
(776 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 179 2e-45
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 179 2e-45
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 179 2e-45
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 179 2e-45
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 179 2e-45
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 179 2e-45
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 179 2e-45
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 179 2e-45
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 179 2e-45
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 173 2e-43
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 165 2e-41
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 93 3e-19
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 88 8e-18
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 67 1e-11
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 56 3e-08
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 53 2e-07
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 36 0.024
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 36 0.024
U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol ... 31 0.70
U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol ... 31 0.70
U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol ... 31 0.70
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 28 8.6
U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical pr... 28 8.6
U28741-1|AAA68325.2| 256|Caenorhabditis elegans Hypothetical pr... 28 8.6
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 28 8.6
AL032654-9|CAA21720.1| 404|Caenorhabditis elegans Hypothetical ... 28 8.6
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 179 bits (435), Expect = 2e-45
Identities = 89/122 (72%), Positives = 92/122 (75%)
Frame = -3
Query: 693 KFRCPEAXFQPSFLVWKLAASTRPHITPS*SATWTSVRTCTPTPYCSGGTTMYPGIADRM 514
+FRCPEA FQPSFL + A + SGGTTMYPGIADRM
Sbjct: 255 RFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRM 314
Query: 513 QKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 334
QKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK
Sbjct: 315 QKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 374
Query: 333 CF 328
CF
Sbjct: 375 CF 376
Score = 32.3 bits (70), Expect = 0.40
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -1
Query: 746 LGEFYEFPDGQVITIGNE 693
L + YE PDGQVIT+GNE
Sbjct: 237 LEKSYELPDGQVITVGNE 254
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 179 bits (435), Expect = 2e-45
Identities = 89/122 (72%), Positives = 92/122 (75%)
Frame = -3
Query: 693 KFRCPEAXFQPSFLVWKLAASTRPHITPS*SATWTSVRTCTPTPYCSGGTTMYPGIADRM 514
+FRCPEA FQPSFL + A + SGGTTMYPGIADRM
Sbjct: 255 RFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRM 314
Query: 513 QKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 334
QKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK
Sbjct: 315 QKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 374
Query: 333 CF 328
CF
Sbjct: 375 CF 376
Score = 32.3 bits (70), Expect = 0.40
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -1
Query: 746 LGEFYEFPDGQVITIGNE 693
L + YE PDGQVIT+GNE
Sbjct: 237 LEKSYELPDGQVITVGNE 254
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 179 bits (435), Expect = 2e-45
Identities = 89/122 (72%), Positives = 92/122 (75%)
Frame = -3
Query: 693 KFRCPEAXFQPSFLVWKLAASTRPHITPS*SATWTSVRTCTPTPYCSGGTTMYPGIADRM 514
+FRCPEA FQPSFL + A + SGGTTMYPGIADRM
Sbjct: 255 RFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRM 314
Query: 513 QKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 334
QKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK
Sbjct: 315 QKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 374
Query: 333 CF 328
CF
Sbjct: 375 CF 376
Score = 32.3 bits (70), Expect = 0.40
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -1
Query: 746 LGEFYEFPDGQVITIGNE 693
L + YE PDGQVIT+GNE
Sbjct: 237 LEKSYELPDGQVITVGNE 254
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 179 bits (435), Expect = 2e-45
Identities = 89/122 (72%), Positives = 92/122 (75%)
Frame = -3
Query: 693 KFRCPEAXFQPSFLVWKLAASTRPHITPS*SATWTSVRTCTPTPYCSGGTTMYPGIADRM 514
+FRCPEA FQPSFL + A + SGGTTMYPGIADRM
Sbjct: 255 RFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRM 314
Query: 513 QKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 334
QKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK
Sbjct: 315 QKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 374
Query: 333 CF 328
CF
Sbjct: 375 CF 376
Score = 32.3 bits (70), Expect = 0.40
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -1
Query: 746 LGEFYEFPDGQVITIGNE 693
L + YE PDGQVIT+GNE
Sbjct: 237 LEKSYELPDGQVITVGNE 254
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 179 bits (435), Expect = 2e-45
Identities = 89/122 (72%), Positives = 92/122 (75%)
Frame = -3
Query: 693 KFRCPEAXFQPSFLVWKLAASTRPHITPS*SATWTSVRTCTPTPYCSGGTTMYPGIADRM 514
+FRCPEA FQPSFL + A + SGGTTMYPGIADRM
Sbjct: 255 RFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRM 314
Query: 513 QKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 334
QKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK
Sbjct: 315 QKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 374
Query: 333 CF 328
CF
Sbjct: 375 CF 376
Score = 32.3 bits (70), Expect = 0.40
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -1
Query: 746 LGEFYEFPDGQVITIGNE 693
L + YE PDGQVIT+GNE
Sbjct: 237 LEKSYELPDGQVITVGNE 254
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 179 bits (435), Expect = 2e-45
Identities = 89/122 (72%), Positives = 92/122 (75%)
Frame = -3
Query: 693 KFRCPEAXFQPSFLVWKLAASTRPHITPS*SATWTSVRTCTPTPYCSGGTTMYPGIADRM 514
+FRCPEA FQPSFL + A + SGGTTMYPGIADRM
Sbjct: 255 RFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRM 314
Query: 513 QKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 334
QKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK
Sbjct: 315 QKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 374
Query: 333 CF 328
CF
Sbjct: 375 CF 376
Score = 32.3 bits (70), Expect = 0.40
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -1
Query: 746 LGEFYEFPDGQVITIGNE 693
L + YE PDGQVIT+GNE
Sbjct: 237 LEKSYELPDGQVITVGNE 254
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 179 bits (435), Expect = 2e-45
Identities = 89/122 (72%), Positives = 92/122 (75%)
Frame = -3
Query: 693 KFRCPEAXFQPSFLVWKLAASTRPHITPS*SATWTSVRTCTPTPYCSGGTTMYPGIADRM 514
+FRCPEA FQPSFL + A + SGGTTMYPGIADRM
Sbjct: 211 RFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRM 270
Query: 513 QKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 334
QKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK
Sbjct: 271 QKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 330
Query: 333 CF 328
CF
Sbjct: 331 CF 332
Score = 32.3 bits (70), Expect = 0.40
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -1
Query: 746 LGEFYEFPDGQVITIGNE 693
L + YE PDGQVIT+GNE
Sbjct: 193 LEKSYELPDGQVITVGNE 210
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 179 bits (435), Expect = 2e-45
Identities = 89/122 (72%), Positives = 92/122 (75%)
Frame = -3
Query: 693 KFRCPEAXFQPSFLVWKLAASTRPHITPS*SATWTSVRTCTPTPYCSGGTTMYPGIADRM 514
+FRCPEA FQPSFL + A + SGGTTMYPGIADRM
Sbjct: 241 RFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRM 300
Query: 513 QKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 334
QKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK
Sbjct: 301 QKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 360
Query: 333 CF 328
CF
Sbjct: 361 CF 362
Score = 32.3 bits (70), Expect = 0.40
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -1
Query: 746 LGEFYEFPDGQVITIGNE 693
L + YE PDGQVIT+GNE
Sbjct: 223 LEKSYELPDGQVITVGNE 240
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 179 bits (435), Expect = 2e-45
Identities = 89/122 (72%), Positives = 92/122 (75%)
Frame = -3
Query: 693 KFRCPEAXFQPSFLVWKLAASTRPHITPS*SATWTSVRTCTPTPYCSGGTTMYPGIADRM 514
+FRCPEA FQPSFL + A + SGGTTMYPGIADRM
Sbjct: 255 RFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRM 314
Query: 513 QKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 334
QKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK
Sbjct: 315 QKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 374
Query: 333 CF 328
CF
Sbjct: 375 CF 376
Score = 32.3 bits (70), Expect = 0.40
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -1
Query: 746 LGEFYEFPDGQVITIGNE 693
L + YE PDGQVIT+GNE
Sbjct: 237 LEKSYELPDGQVITVGNE 254
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 173 bits (420), Expect = 2e-43
Identities = 88/122 (72%), Positives = 91/122 (74%)
Frame = -3
Query: 693 KFRCPEAXFQPSFLVWKLAASTRPHITPS*SATWTSVRTCTPTPYCSGGTTMYPGIADRM 514
+FRCPEA FQPSFL + A + SGGTTMYPGIADRM
Sbjct: 255 RFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRM 314
Query: 513 QKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 334
QKEITALAP TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK
Sbjct: 315 QKEITALAP-TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 373
Query: 333 CF 328
CF
Sbjct: 374 CF 375
Score = 32.3 bits (70), Expect = 0.40
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -1
Query: 746 LGEFYEFPDGQVITIGNE 693
L + YE PDGQVIT+GNE
Sbjct: 237 LEKSYELPDGQVITVGNE 254
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 165 bits (402), Expect = 2e-41
Identities = 82/122 (67%), Positives = 89/122 (72%)
Frame = -3
Query: 693 KFRCPEAXFQPSFLVWKLAASTRPHITPS*SATWTSVRTCTPTPYCSGGTTMYPGIADRM 514
+FRCPE FQP+F+ + A + SGGT+M+PGIADRM
Sbjct: 254 RFRCPEVLFQPAFIGMEGAGIHETTYQSIMKCDVDIRKDLYANTVLSGGTSMFPGIADRM 313
Query: 513 QKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 334
QKEI LAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK
Sbjct: 314 QKEIQHLAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 373
Query: 333 CF 328
CF
Sbjct: 374 CF 375
Score = 32.7 bits (71), Expect = 0.30
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = -1
Query: 746 LGEFYEFPDGQVITIGNE 693
L + YE PDGQVITIGNE
Sbjct: 236 LEKSYELPDGQVITIGNE 253
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 92.7 bits (220), Expect = 3e-19
Identities = 41/78 (52%), Positives = 53/78 (67%), Gaps = 3/78 (3%)
Frame = -3
Query: 555 SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP---ERKYSVWIGGSILASLSTFQQMW 385
+GG ++ G +R+ + P T+K+++ A P ERKY WIGGSIL SL TFQQMW
Sbjct: 358 TGGNSLILGFTERLNYALATKCPPTIKLRVFAAPTQAERKYGAWIGGSILGSLGTFQQMW 417
Query: 384 ISKQEYDESGPSIVHRKC 331
+SK EYDESG SIV +KC
Sbjct: 418 VSKAEYDESGKSIVEKKC 435
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 87.8 bits (208), Expect = 8e-18
Identities = 46/122 (37%), Positives = 68/122 (55%), Gaps = 1/122 (0%)
Frame = -3
Query: 690 FRCPEAXFQPSFLVWKLAASTRPHITPS*SATWTSVR-TCTPTPYCSGGTTMYPGIADRM 514
FR PE F+P + + + S +R T SGGTT++ G DR+
Sbjct: 254 FRAPEVLFKPDLIGTEWPGMAHV-VNQSIMKCDVDLRQTLYSNIVLSGGTTLFKGFGDRL 312
Query: 513 QKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 334
E+ +AP+ KI+I A ER WIGGSI+ASL TF++MW+ K+EY++ G S +H++
Sbjct: 313 LGEMRKIAPADGKIRISASQERNSLTWIGGSIVASLDTFRKMWLGKKEYEDMGASAMHKR 372
Query: 333 CF 328
F
Sbjct: 373 FF 374
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/55 (36%), Positives = 29/55 (52%)
Frame = -2
Query: 721 TVRSSLSETKIPLPRGXXPTXVLGMEACGIHETTYNSIMKCDVDIRKDLYANTVL 557
T + +S + P ++G E G+ SIMKCDVD+R+ LY+N VL
Sbjct: 244 TTKIEISNSLFRAPEVLFKPDLIGTEWPGMAHVVNQSIMKCDVDLRQTLYSNIVL 298
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 67.3 bits (157), Expect = 1e-11
Identities = 36/80 (45%), Positives = 50/80 (62%), Gaps = 13/80 (16%)
Frame = -3
Query: 555 SGGTTMYPGIADRMQKEITAL-----------APSTMKIKIIAPPERKYSVWIGGSILAS 409
SGGTTMYPG+ R++KE+ L A KI+I APP RK+ V++GG++LA+
Sbjct: 304 SGGTTMYPGLPSRLEKELKQLYLDRVLHGNTDAFQKFKIRIEAPPSRKHMVFLGGAVLAN 363
Query: 408 L--STFQQMWISKQEYDESG 355
L Q W+SK+EY+E G
Sbjct: 364 LMKDRDQDFWVSKKEYEEGG 383
Score = 27.9 bits (59), Expect = 8.6
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = -2
Query: 658 VLGMEACGIHETTYNSIMKCDVDIRKDLYANTVL 557
++ +E G+ E + I D+D R D Y + VL
Sbjct: 270 LINVEKAGLSELLFGCIQASDIDTRLDFYKHIVL 303
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 56.0 bits (129), Expect = 3e-08
Identities = 25/73 (34%), Positives = 46/73 (63%)
Frame = -3
Query: 588 SVRTCTPTPYCSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILAS 409
S RT Y +GG ++ PGIA+++++E++ + P+T+ ++ P R + ++G I+AS
Sbjct: 467 SRRTLYRNIYLAGGASLMPGIAEKLEQELSTVVPNTIHTQVNISPWRYNAAYLGAQIVAS 526
Query: 408 LSTFQQMWISKQE 370
STF+ IS Q+
Sbjct: 527 ASTFEDSCISLQQ 539
Score = 36.3 bits (80), Expect = 0.024
Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Frame = -2
Query: 748 SLENFTNFPTV--RSSLSETKIPLPRGXXPTXVLGMEACGIHETTYNSIMKCDVDIRKDL 575
SL+ FT P + R + ++ G G++ G+H+ + +I++C +D R+ L
Sbjct: 412 SLDAFTPSPGMQTRFDIDNSRFLCTEGLFKPKKWGLDTKGLHQLIHEAILQCPIDSRRTL 471
Query: 574 YANTVL 557
Y N L
Sbjct: 472 YRNIYL 477
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 53.2 bits (122), Expect = 2e-07
Identities = 30/86 (34%), Positives = 49/86 (56%), Gaps = 16/86 (18%)
Frame = -3
Query: 555 SGGTTMYPGIADRMQKEITALA----------------PSTMKIKIIAPPERKYSVWIGG 424
SGG+TM+ A ++Q+++ L+ P + +++I+ ++Y+VW GG
Sbjct: 329 SGGSTMFKDFARKLQRDVKRLSDGRLQMSETLSGGRLKPKPIDVQVISHKMQRYAVWFGG 388
Query: 423 SILASLSTFQQMWISKQEYDESGPSI 346
S+LAS S F Q+ +K EY E GPSI
Sbjct: 389 SMLASTSEFYQVSHTKAEYMERGPSI 414
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 36.3 bits (80), Expect = 0.024
Identities = 20/80 (25%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Frame = -3
Query: 552 GGTTMYPGIADRMQKEITALAPSTMKIKI---IAPPERKYSVWIGGSILASLSTFQQMWI 382
GG++ +PG +R+++E+ ++ P+ + + + P+ W G L L+ + WI
Sbjct: 316 GGSSCFPGFRERLEREVRSMLPAEYGLNVSNDVINPQT--HSWHCGQEL--LTASKVPWI 371
Query: 381 SKQEYDESGPSIVHRKCF*T 322
+++++DE G S+ F T
Sbjct: 372 NRKDWDERGDSLEFSNFFQT 391
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 36.3 bits (80), Expect = 0.024
Identities = 20/80 (25%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Frame = -3
Query: 552 GGTTMYPGIADRMQKEITALAPSTMKIKI---IAPPERKYSVWIGGSILASLSTFQQMWI 382
GG++ +PG +R+++E+ ++ P+ + + + P+ W G L L+ + WI
Sbjct: 316 GGSSCFPGFRERLEREVRSMLPAEYGLNVSNDVINPQT--HSWHCGQEL--LTASKVPWI 371
Query: 381 SKQEYDESGPSIVHRKCF*T 322
+++++DE G S+ F T
Sbjct: 372 NRKDWDERGDSLEFSNFFQT 391
>U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform b protein.
Length = 144
Score = 31.5 bits (68), Expect = 0.70
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 433 PYGVLPLWRSNDLNLHCRWGESCD 504
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform c protein.
Length = 351
Score = 31.5 bits (68), Expect = 0.70
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 433 PYGVLPLWRSNDLNLHCRWGESCD 504
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform a protein.
Length = 536
Score = 31.5 bits (68), Expect = 0.70
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 433 PYGVLPLWRSNDLNLHCRWGESCD 504
P VLPL NDL+ +WG+ CD
Sbjct: 282 PVAVLPLGTGNDLSRLLKWGKKCD 305
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
F29D11.1 protein.
Length = 4753
Score = 27.9 bits (59), Expect = 8.6
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 269 KPELSSRPRAAGGSDARCV*KHFLCTMEGPD 361
+P + R A GG DA+C+ K + C E PD
Sbjct: 3624 EPNCTERQFACGGDDAKCIPKLWYCDGE-PD 3653
>U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical
protein C49H3.8 protein.
Length = 305
Score = 27.9 bits (59), Expect = 8.6
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 10/78 (12%)
Frame = -3
Query: 570 PTPYCSGGTTMYPGIADRMQKEITAL-APSTMKIKIIAP----PERK----YSVWIGGSI 418
P +GG + PG+ R+++EI + + KI +I E K + W+G S+
Sbjct: 211 PNILLTGGVSTIPGLMKRLEQEIQVIDEKNNSKIAVIVKFYQFSEIKNTPLFVSWLGASL 270
Query: 417 LASL-STFQQMWISKQEY 367
L SL T ++ ++ +E+
Sbjct: 271 LGSLRETIERKSLTLEEW 288
>U28741-1|AAA68325.2| 256|Caenorhabditis elegans Hypothetical
protein F35D2.3 protein.
Length = 256
Score = 27.9 bits (59), Expect = 8.6
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -3
Query: 372 EYDESGPSIVHRKCF*THRASLPPAARGRLLNSG 271
+Y ++G SIV+ KC T R P R R LN G
Sbjct: 30 DYCKNGGSIVNGKCECTLRYEGPQCERERCLNGG 63
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
protein protein.
Length = 4753
Score = 27.9 bits (59), Expect = 8.6
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 269 KPELSSRPRAAGGSDARCV*KHFLCTMEGPD 361
+P + R A GG DA+C+ K + C E PD
Sbjct: 3624 EPNCTERQFACGGDDAKCIPKLWYCDGE-PD 3653
>AL032654-9|CAA21720.1| 404|Caenorhabditis elegans Hypothetical
protein Y52B11A.9 protein.
Length = 404
Score = 27.9 bits (59), Expect = 8.6
Identities = 19/54 (35%), Positives = 25/54 (46%)
Frame = -3
Query: 453 ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF*THRASLPPAAR 292
+RK V G A +S F + K++ DE GPS RK S PAA+
Sbjct: 213 DRKLDVK-SGVASAKISIFDMPKVKKEDPDEPGPSQPSRKSGKKRSRSRSPAAK 265
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,098,502
Number of Sequences: 27780
Number of extensions: 350496
Number of successful extensions: 1065
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 997
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1038
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1872168044
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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