Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP11_T7_B09
(911 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X71975-1|CAA50795.1| 239|Drosophila melanogaster GCR 101 protein. 28 0.21
U13178-1|AAA86955.1| 404|Drosophila melanogaster RNA binding pr... 25 1.3
L37083-1|AAC41563.1| 404|Drosophila melanogaster RNA binding pr... 25 1.3
M15765-1|AAA70425.1| 365|Drosophila melanogaster unknown protei... 25 1.3
AE013599-3129|AAF46672.1| 237|Drosophila melanogaster CG4038-PA... 28 1.8
U67066-1|AAB17271.1| 264|Drosophila melanogaster U2 snRNP auxil... 25 3.8
AY058537-1|AAL13766.1| 264|Drosophila melanogaster LD24048p pro... 25 3.8
AE014134-79|AAF51512.1| 264|Drosophila melanogaster CG3582-PA p... 25 3.8
BT004847-1|AAO45203.1| 955|Drosophila melanogaster RE70412p pro... 24 5.8
AE014298-2109|AAF48429.2| 955|Drosophila melanogaster CG9095-PA... 24 5.8
AE014297-4202|AAN14134.1| 1150|Drosophila melanogaster CG5514-PB... 24 7.4
AE014297-4203|AAF56763.2| 1109|Drosophila melanogaster CG5514-PA... 24 7.4
AY119485-1|AAM50139.1| 846|Drosophila melanogaster GH07623p pro... 24 7.6
>X71975-1|CAA50795.1| 239|Drosophila melanogaster GCR 101 protein.
Length = 239
Score = 27.9 bits (59), Expect(2) = 0.21
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = +1
Query: 622 FXPPPPPPXXXXXXXKKKKXXXXXXGGGGGGGG 720
F P PP P KK GGGGGGGG
Sbjct: 152 FLPKPPQPKG------AKKAFTNNRGGGGGGGG 178
Score = 25.4 bits (53), Expect(2) = 0.21
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +1
Query: 697 GGGGGGGGXF 726
GGGGGGGG F
Sbjct: 213 GGGGGGGGGF 222
>U13178-1|AAA86955.1| 404|Drosophila melanogaster RNA binding
protein protein.
Length = 404
Score = 25.4 bits (53), Expect(2) = 1.3
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +2
Query: 698 GGGGGGGGXF 727
GGGGGGGG F
Sbjct: 236 GGGGGGGGRF 245
Score = 25.0 bits (52), Expect(2) = 1.3
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +2
Query: 668 KKKKXXXKXXGGGGGGGG 721
+++ K GGGGGGGG
Sbjct: 204 QRQNNWNKGGGGGGGGGG 221
>L37083-1|AAC41563.1| 404|Drosophila melanogaster RNA binding
protein protein.
Length = 404
Score = 25.4 bits (53), Expect(2) = 1.3
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +2
Query: 698 GGGGGGGGXF 727
GGGGGGGG F
Sbjct: 236 GGGGGGGGRF 245
Score = 25.0 bits (52), Expect(2) = 1.3
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +2
Query: 668 KKKKXXXKXXGGGGGGGG 721
+++ K GGGGGGGG
Sbjct: 204 QRQNNWNKGGGGGGGGGG 221
>M15765-1|AAA70425.1| 365|Drosophila melanogaster unknown protein
protein.
Length = 365
Score = 25.4 bits (53), Expect(2) = 1.3
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +2
Query: 698 GGGGGGGGXF 727
GGGGGGGG F
Sbjct: 198 GGGGGGGGRF 207
Score = 25.0 bits (52), Expect(2) = 1.3
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +2
Query: 668 KKKKXXXKXXGGGGGGGG 721
+++ K GGGGGGGG
Sbjct: 166 QRQNNWNKGGGGGGGGGG 183
>AE013599-3129|AAF46672.1| 237|Drosophila melanogaster CG4038-PA
protein.
Length = 237
Score = 27.9 bits (59), Expect(2) = 1.8
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = +1
Query: 622 FXPPPPPPXXXXXXXKKKKXXXXXXGGGGGGGG 720
F P PP P KK GGGGGGGG
Sbjct: 154 FLPKPPQPKG------AKKAFTNNRGGGGGGGG 180
Score = 22.2 bits (45), Expect(2) = 1.8
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +1
Query: 697 GGGGGGGGXF 726
GGGG GGG F
Sbjct: 195 GGGGRGGGGF 204
>U67066-1|AAB17271.1| 264|Drosophila melanogaster U2 snRNP
auxiliary factor protein.
Length = 264
Score = 24.6 bits (51), Expect(2) = 3.8
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +2
Query: 689 KXXGGGGGGGG 721
K GGGGGGGG
Sbjct: 251 KGGGGGGGGGG 261
Score = 24.2 bits (50), Expect(2) = 3.8
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +2
Query: 698 GGGGGGGGXF 727
GGGGGGGG +
Sbjct: 255 GGGGGGGGRY 264
>AY058537-1|AAL13766.1| 264|Drosophila melanogaster LD24048p
protein.
Length = 264
Score = 24.6 bits (51), Expect(2) = 3.8
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +2
Query: 689 KXXGGGGGGGG 721
K GGGGGGGG
Sbjct: 251 KGGGGGGGGGG 261
Score = 24.2 bits (50), Expect(2) = 3.8
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +2
Query: 698 GGGGGGGGXF 727
GGGGGGGG +
Sbjct: 255 GGGGGGGGRY 264
>AE014134-79|AAF51512.1| 264|Drosophila melanogaster CG3582-PA
protein.
Length = 264
Score = 24.6 bits (51), Expect(2) = 3.8
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +2
Query: 689 KXXGGGGGGGG 721
K GGGGGGGG
Sbjct: 251 KGGGGGGGGGG 261
Score = 24.2 bits (50), Expect(2) = 3.8
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +2
Query: 698 GGGGGGGGXF 727
GGGGGGGG +
Sbjct: 255 GGGGGGGGRY 264
>BT004847-1|AAO45203.1| 955|Drosophila melanogaster RE70412p
protein.
Length = 955
Score = 24.2 bits (50), Expect(2) = 5.8
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +2
Query: 698 GGGGGGGGXF 727
GGGGGGGG +
Sbjct: 946 GGGGGGGGHY 955
Score = 23.8 bits (49), Expect(2) = 5.8
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +2
Query: 674 KKXXXKXXGGGGGGGG 721
++ + GGGGGGGG
Sbjct: 934 RREHHRHSGGGGGGGG 949
>AE014298-2109|AAF48429.2| 955|Drosophila melanogaster CG9095-PA
protein.
Length = 955
Score = 24.2 bits (50), Expect(2) = 5.8
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +2
Query: 698 GGGGGGGGXF 727
GGGGGGGG +
Sbjct: 946 GGGGGGGGHY 955
Score = 23.8 bits (49), Expect(2) = 5.8
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +2
Query: 674 KKXXXKXXGGGGGGGG 721
++ + GGGGGGGG
Sbjct: 934 RREHHRHSGGGGGGGG 949
>AE014297-4202|AAN14134.1| 1150|Drosophila melanogaster CG5514-PB,
isoform B protein.
Length = 1150
Score = 23.8 bits (49), Expect(2) = 7.4
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -1
Query: 719 PPPPPPP 699
PPPPPPP
Sbjct: 435 PPPPPPP 441
Score = 23.8 bits (49), Expect(2) = 7.4
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -1
Query: 716 PPPPPPP 696
PPPPPPP
Sbjct: 448 PPPPPPP 454
>AE014297-4203|AAF56763.2| 1109|Drosophila melanogaster CG5514-PA,
isoform A protein.
Length = 1109
Score = 23.8 bits (49), Expect(2) = 7.4
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -1
Query: 719 PPPPPPP 699
PPPPPPP
Sbjct: 435 PPPPPPP 441
Score = 23.8 bits (49), Expect(2) = 7.4
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -1
Query: 716 PPPPPPP 696
PPPPPPP
Sbjct: 448 PPPPPPP 454
>AY119485-1|AAM50139.1| 846|Drosophila melanogaster GH07623p
protein.
Length = 846
Score = 23.8 bits (49), Expect(2) = 7.6
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -1
Query: 719 PPPPPPP 699
PPPPPPP
Sbjct: 172 PPPPPPP 178
Score = 23.8 bits (49), Expect(2) = 7.6
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -1
Query: 716 PPPPPPP 696
PPPPPPP
Sbjct: 185 PPPPPPP 191
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,639,491
Number of Sequences: 53049
Number of extensions: 661980
Number of successful extensions: 32706
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2666
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12378
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4464466254
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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