Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP11_T7_B09
         (911 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81053-1|CAB02877.1|  385|Caenorhabditis elegans Hypothetical pr...    29   3.5  
Z81533-8|CAB04332.1|  917|Caenorhabditis elegans Hypothetical pr...    24   5.1  
Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical pr...    23   6.4  
L23646-1|AAA28041.1|  244|Caenorhabditis elegans Hypothetical pr...    28   8.1  

>Z81053-1|CAB02877.1|  385|Caenorhabditis elegans Hypothetical
           protein E02A10.2 protein.
          Length = 385

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 13/30 (43%), Positives = 13/30 (43%)
 Frame = +1

Query: 628 PPPPPPXXXXXXXKKKKXXXXXXGGGGGGG 717
           PPPPPP                 GGGGGGG
Sbjct: 111 PPPPPPACGGGCGGGGGGCGGGCGGGGGGG 140



 Score = 28.3 bits (60), Expect = 8.1
 Identities = 13/31 (41%), Positives = 13/31 (41%)
 Frame = +1

Query: 628 PPPPPPXXXXXXXKKKKXXXXXXGGGGGGGG 720
           PPPPPP                 GG GGGGG
Sbjct: 54  PPPPPPACGGGCGGGGGGCGGGGGGCGGGGG 84


>Z81533-8|CAB04332.1|  917|Caenorhabditis elegans Hypothetical
           protein F36G9.13 protein.
          Length = 917

 Score = 24.2 bits (50), Expect(2) = 5.1
 Identities = 10/27 (37%), Positives = 10/27 (37%)
 Frame = -1

Query: 779 FFXXXFXXXXXXXXXXXXXXPPPPPPP 699
           FF   F              PPPPPPP
Sbjct: 827 FFFFRFVARREQSAQHSVKVPPPPPPP 853



 Score = 23.0 bits (47), Expect(2) = 5.1
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = -1

Query: 719 PPPPPPPP 696
           PPPPPP P
Sbjct: 848 PPPPPPVP 855


>Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical
           protein R08B4.1b protein.
          Length = 1160

 Score = 23.4 bits (48), Expect(2) = 6.4
 Identities = 11/30 (36%), Positives = 11/30 (36%)
 Frame = +2

Query: 629 PPPPPXXXXXXXXKKKKXXXKXXGGGGGGG 718
           PPPP                   GGGGGGG
Sbjct: 764 PPPPSDFIDIPNDPTLGGPTGSSGGGGGGG 793



 Score = 23.4 bits (48), Expect(2) = 6.4
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = +2

Query: 698 GGGGGGGG 721
           GGGGGGGG
Sbjct: 799 GGGGGGGG 806


>L23646-1|AAA28041.1|  244|Caenorhabditis elegans Hypothetical
           protein F44E2.3 protein.
          Length = 244

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 9/10 (90%), Positives = 9/10 (90%)
 Frame = -3

Query: 726 KXPPPPPPPP 697
           K PPPPPPPP
Sbjct: 77  KLPPPPPPPP 86


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,608,082
Number of Sequences: 27780
Number of extensions: 227368
Number of successful extensions: 7558
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 625
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3172
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2328783996
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)