Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP11_T7_B04
         (815 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    25   0.84 
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    25   0.84 
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    25   0.84 
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    23   3.4  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   4.5  
DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.    22   7.8  

>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 25.0 bits (52), Expect = 0.84
 Identities = 12/42 (28%), Positives = 21/42 (50%)
 Frame = -2

Query: 547 HSQPASASNFRLTQTSGNRISIPPQQKKPTLDDDDFPSLSMG 422
           H +   A     ++T+ N  S P    KP+L DD+   +++G
Sbjct: 244 HREADDAEESVSSETNHNERSTPRSHAKPSLIDDEPTEVTIG 285


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 25.0 bits (52), Expect = 0.84
 Identities = 12/42 (28%), Positives = 21/42 (50%)
 Frame = -2

Query: 547 HSQPASASNFRLTQTSGNRISIPPQQKKPTLDDDDFPSLSMG 422
           H +   A     ++T+ N  S P    KP+L DD+   +++G
Sbjct: 244 HREADDAEESVSSETNHNERSTPRSHAKPSLIDDEPTEVTIG 285


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 25.0 bits (52), Expect = 0.84
 Identities = 12/42 (28%), Positives = 21/42 (50%)
 Frame = -2

Query: 547 HSQPASASNFRLTQTSGNRISIPPQQKKPTLDDDDFPSLSMG 422
           H +   A     ++T+ N  S P    KP+L DD+   +++G
Sbjct: 244 HREADDAEESVSSETNHNERSTPRSHAKPSLIDDEPTEVTIG 285


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +3

Query: 279 GNASVLRWDFFGCDW 323
           G  S+ R+DF GC W
Sbjct: 569 GGDSLERFDFCGCGW 583


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.6 bits (46), Expect = 4.5
 Identities = 17/86 (19%), Positives = 36/86 (41%)
 Frame = -2

Query: 586  IXRNXKPSVSIQLHSQPASASNFRLTQTSGNRISIPPQQKKPTLDDDDFPSLSMGRDDHP 407
            + RN + +   +L    +   ++R    SG R      ++ PT+D    PS     DD  
Sbjct: 1332 LCRNSRRTPVPRLAQDSSEDESYRGPSASGGRPVPERPERVPTVDLSPSPSDRGRNDDGS 1391

Query: 406  NIGASSVQPPKVTMINSQEMQALKNN 329
            +   S   P  ++   S++  + +++
Sbjct: 1392 DRLTSPPTPLSISRAGSRDEDSTRDS 1417


>DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.
          Length = 471

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +2

Query: 353 LTIDHGDLRRLHTTSSDVGMVVS 421
           +T+D GD   +HT  +  G+ +S
Sbjct: 166 MTVDAGDSMFVHTFGAYFGLAIS 188


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,363
Number of Sequences: 438
Number of extensions: 3376
Number of successful extensions: 13
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25974678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)