Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP11_T7_B02
(843 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF016683-8|AAM97998.1| 480|Caenorhabditis elegans Hypothetical ... 32 0.59
AL009246-2|CAA15836.3| 362|Caenorhabditis elegans Hypothetical ... 29 4.1
Z84574-8|CAE54891.1| 921|Caenorhabditis elegans Hypothetical pr... 29 5.5
Z84574-7|CAB06544.3| 928|Caenorhabditis elegans Hypothetical pr... 29 5.5
Z71178-1|CAA94874.1| 297|Caenorhabditis elegans Hypothetical pr... 29 5.5
AL022593-4|CAE54889.1| 921|Caenorhabditis elegans Hypothetical ... 29 5.5
AL022593-3|CAA18635.3| 928|Caenorhabditis elegans Hypothetical ... 29 5.5
AF026206-4|AAK39309.1| 535|Caenorhabditis elegans Hypothetical ... 28 7.2
AF026206-3|AAK39308.1| 518|Caenorhabditis elegans Hypothetical ... 28 7.2
AF026206-2|AAT92054.1| 552|Caenorhabditis elegans Hypothetical ... 28 7.2
AL033514-7|CAA22114.1| 648|Caenorhabditis elegans Hypothetical ... 28 9.5
>AF016683-8|AAM97998.1| 480|Caenorhabditis elegans Hypothetical
protein K09F6.10 protein.
Length = 480
Score = 31.9 bits (69), Expect = 0.59
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = -3
Query: 424 DYKATILCKDCHKLSTVK-FHVVGLKCQHCGAYNTCQTNGFHK 299
DY T C C++ S + + G KC+ CG N C+ NG K
Sbjct: 326 DYVNTGFCFKCNQYSGRRHYQTCGAKCRRCGVTN-CEKNGVGK 367
>AL009246-2|CAA15836.3| 362|Caenorhabditis elegans Hypothetical
protein C47F8.2 protein.
Length = 362
Score = 29.1 bits (62), Expect = 4.1
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -3
Query: 403 CKDCHKLSTVKFHVVGLKCQHCGAY 329
C C + T KFH GL C C ++
Sbjct: 11 CLICGSICTAKFHFGGLSCNACASF 35
>Z84574-8|CAE54891.1| 921|Caenorhabditis elegans Hypothetical
protein F33E2.2b protein.
Length = 921
Score = 28.7 bits (61), Expect = 5.5
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +1
Query: 298 PYGTRSSDTCCRLRNVDISVLRRETSPLTAYDNPCTV 408
P T + C N D+++ TSP+T Y NPC V
Sbjct: 756 PESTSYDEALC---NSDVTMNPIYTSPITTYSNPCHV 789
>Z84574-7|CAB06544.3| 928|Caenorhabditis elegans Hypothetical
protein F33E2.2a protein.
Length = 928
Score = 28.7 bits (61), Expect = 5.5
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +1
Query: 298 PYGTRSSDTCCRLRNVDISVLRRETSPLTAYDNPCTV 408
P T + C N D+++ TSP+T Y NPC V
Sbjct: 763 PESTSYDEALC---NSDVTMNPIYTSPITTYSNPCHV 796
>Z71178-1|CAA94874.1| 297|Caenorhabditis elegans Hypothetical
protein B0024.1 protein.
Length = 297
Score = 28.7 bits (61), Expect = 5.5
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = -3
Query: 679 SXFGTVPVWLGGXPXRPAFPCQHPGXCGHP 590
S F +P W P +P P PG GHP
Sbjct: 86 STFSGLPAWCQCEPTKPKCPRGPPGPPGHP 115
>AL022593-4|CAE54889.1| 921|Caenorhabditis elegans Hypothetical
protein F33E2.2b protein.
Length = 921
Score = 28.7 bits (61), Expect = 5.5
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +1
Query: 298 PYGTRSSDTCCRLRNVDISVLRRETSPLTAYDNPCTV 408
P T + C N D+++ TSP+T Y NPC V
Sbjct: 756 PESTSYDEALC---NSDVTMNPIYTSPITTYSNPCHV 789
>AL022593-3|CAA18635.3| 928|Caenorhabditis elegans Hypothetical
protein F33E2.2a protein.
Length = 928
Score = 28.7 bits (61), Expect = 5.5
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +1
Query: 298 PYGTRSSDTCCRLRNVDISVLRRETSPLTAYDNPCTV 408
P T + C N D+++ TSP+T Y NPC V
Sbjct: 763 PESTSYDEALC---NSDVTMNPIYTSPITTYSNPCHV 796
>AF026206-4|AAK39309.1| 535|Caenorhabditis elegans Hypothetical
protein T28B4.1a protein.
Length = 535
Score = 28.3 bits (60), Expect = 7.2
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = +2
Query: 404 QYRGLVVGVLGRHRCGRYFGIEIIPEIRHV 493
Q+ GL +G G+H+ YF + +IP++R++
Sbjct: 391 QFHGLCLG--GQHKLLEYFWMNMIPQLRNI 418
>AF026206-3|AAK39308.1| 518|Caenorhabditis elegans Hypothetical
protein T28B4.1b protein.
Length = 518
Score = 28.3 bits (60), Expect = 7.2
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = +2
Query: 404 QYRGLVVGVLGRHRCGRYFGIEIIPEIRHV 493
Q+ GL +G G+H+ YF + +IP++R++
Sbjct: 374 QFHGLCLG--GQHKLLEYFWMNMIPQLRNI 401
>AF026206-2|AAT92054.1| 552|Caenorhabditis elegans Hypothetical
protein T28B4.1c protein.
Length = 552
Score = 28.3 bits (60), Expect = 7.2
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = +2
Query: 404 QYRGLVVGVLGRHRCGRYFGIEIIPEIRHV 493
Q+ GL +G G+H+ YF + +IP++R++
Sbjct: 408 QFHGLCLG--GQHKLLEYFWMNMIPQLRNI 435
>AL033514-7|CAA22114.1| 648|Caenorhabditis elegans Hypothetical
protein Y75B8A.7 protein.
Length = 648
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = -2
Query: 524 RVPHVPDEHDRHVESLELSRFRSSGHTDAVRVRRLQ 417
R P V +E +ESL R R D +RV++++
Sbjct: 389 RAPEVTEEFTDRLESLIKQRIRDKAWDDVIRVKKVE 424
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,765,141
Number of Sequences: 27780
Number of extensions: 295451
Number of successful extensions: 797
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 763
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 797
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2087513582
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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