Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP11_T7_A02
(1078 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0059 - 394001-394708 36 0.073
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 33 0.30
02_05_0686 - 30900748-30902167,30903442-30904742 32 0.68
12_02_0299 - 17051570-17052474,17053542-17053755 31 1.6
01_03_0005 + 11568545-11569119,11569179-11569191 31 2.1
11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-25... 30 2.8
10_08_0608 + 19184722-19185224,19185331-19185410,19186048-191862... 30 2.8
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 30 2.8
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 30 2.8
07_03_0792 - 21541301-21542143,21542426-21542661,21543177-215433... 30 2.8
01_01_0446 + 3321832-3322232,3322398-3322455,3322810-3323748,332... 30 2.8
09_02_0495 + 9880714-9881196 30 3.6
07_03_1136 + 24218601-24218734,24218769-24219906 30 3.6
06_01_1013 - 7931756-7935109 30 3.6
04_04_0137 - 23053148-23053798,23053911-23054146,23054268-230544... 29 4.8
03_02_0342 - 7645323-7645909,7646323-7646491 29 4.8
12_01_0239 - 1793612-1793716,1793808-1793826,1794424-1794599,179... 29 6.4
03_02_0455 - 8630543-8630893,8630994-8631068,8631149-8631223,863... 29 6.4
12_02_1174 - 26696869-26698191 29 8.4
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 29 8.4
04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066 29 8.4
>08_01_0059 - 394001-394708
Length = 235
Score = 35.5 bits (78), Expect = 0.073
Identities = 20/72 (27%), Positives = 21/72 (29%)
Frame = +2
Query: 698 PPXXPPXXXPXXXXXXXXXXXXXPXXPPXPXXXPXXPXSPXXXXPSPPXXXXXXXXXFXX 877
PP PP P P PP P P P +P P PP
Sbjct: 2 PPPPPPRRAPPPPATPPPPPRRAPP-PPSPPIRPPPPPTPRPYAPPPPSHPLAPPPPHIS 60
Query: 878 XXXPXPXPPXLP 913
P P PP P
Sbjct: 61 PPAPVPPPPSPP 72
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 33.5 bits (73), Expect = 0.30
Identities = 29/100 (29%), Positives = 30/100 (30%), Gaps = 6/100 (6%)
Frame = +1
Query: 253 PPFXXKXKXXPPXKTRGGXXPXPPGGXGGGXKKXAPPPXIFLXRXXFFXGGXXPXXXXKK 432
PP PP + G P PP GG PPP L P
Sbjct: 1089 PPTLGDYGVAPPPPSIGAGAPPPPPPPGGITGVPPPPPIGGLGGHQAPPAPPLPEGIGGV 1148
Query: 433 PPPP----XXXXXXXXXXXXXRGG--GXXKXGGGXPPPPP 534
PPPP RGG GG PPPPP
Sbjct: 1149 PPPPPVGGLGGPPAPPPPAGFRGGTPPPNAHGGVAPPPPP 1188
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 32.3 bits (70), Expect = 0.68
Identities = 17/39 (43%), Positives = 17/39 (43%)
Frame = +1
Query: 250 GPPFXXKXKXXPPXKTRGGXXPXPPGGXGGGXKKXAPPP 366
GPP K PP G P PP GG KK PPP
Sbjct: 343 GPPPPPPAKGPPPPPPPKGPSPPPPPPPGG--KKGGPPP 379
Score = 31.9 bits (69), Expect = 0.90
Identities = 27/84 (32%), Positives = 27/84 (32%)
Frame = +1
Query: 283 PPXKTRGGXXPXPPGGXGGGXKKXAPPPXIFLXRXXFFXGGXXPXXXXKKPPPPXXXXXX 462
PP K P PP K APPP G P K PPPP
Sbjct: 317 PPPKPAAAAPPPPP------PPKAAPPPPP--------PKGPPPPPPAKGPPPPPPPKGP 362
Query: 463 XXXXXXXRGGGXXKXGGGXPPPPP 534
GG GG PPPPP
Sbjct: 363 SPPPPPPPGGKK----GGPPPPPP 382
Score = 29.5 bits (63), Expect = 4.8
Identities = 20/65 (30%), Positives = 21/65 (32%)
Frame = -3
Query: 677 PXXXPPPXAXXXXXXXGXXPLXXXXXXXXPPPPPDXXXVFXXXKKKXXGGGGGXPPPXLX 498
P PPP A P PPPPP GG G PPP
Sbjct: 326 PPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGP---SPPPPPPPGGKKGGPPP--- 379
Query: 497 XPPPR 483
PPP+
Sbjct: 380 -PPPK 383
>12_02_0299 - 17051570-17052474,17053542-17053755
Length = 372
Score = 31.1 bits (67), Expect = 1.6
Identities = 18/68 (26%), Positives = 18/68 (26%)
Frame = +2
Query: 701 PXXPPXXXPXXXXXXXXXXXXXPXXPPXPXXXPXXPXSPXXXXPSPPXXXXXXXXXFXXX 880
P PP P P PP P P P P P PP
Sbjct: 286 PPSPPPPPPPAFPFPFPQLPPLPHFPPLPSFYP-SPPPPPPPPPPPPPSFPWPFPPLAPL 344
Query: 881 XXPXPXPP 904
P P PP
Sbjct: 345 FPPYPSPP 352
>01_03_0005 + 11568545-11569119,11569179-11569191
Length = 195
Score = 30.7 bits (66), Expect = 2.1
Identities = 17/60 (28%), Positives = 20/60 (33%)
Frame = -2
Query: 516 PPPXFXXXPPPXXXXXXXXXXPXXGGGGFFXXXXWXXPPXKKXXPX*KNXGGGGXFFXPP 337
PPP P P GGGG PP + GGGG ++ PP
Sbjct: 57 PPPPPVVTPTPQCPPPPSYPSGGGGGGGGGTVMYTSPPPPYSGGGGGSSTGGGGIYYPPP 116
>11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-256958,
257038-257169,257297-258589,259133-259837,260465-260549,
260604-260650,260810-260900,261838-262101,262195-262309,
262455-262570,262713-262847,262969-263036,263292-263411
Length = 1235
Score = 30.3 bits (65), Expect = 2.8
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = +1
Query: 283 PPXKTRGGXXPXPPGGXGGGXKKXAPPP 366
PP + G P PP G GG PPP
Sbjct: 921 PPPRPPGAPPPPPPPGKPGGPPPPPPPP 948
>10_08_0608 +
19184722-19185224,19185331-19185410,19186048-19186235,
19187021-19187927,19188015-19188142,19189270-19189356,
19189422-19189472,19189582-19189668,19189746-19189873,
19190469-19190608,19190721-19190882,19190964-19192733,
19192807-19192922,19193077-19193227,19193243-19193371,
19193598-19194139
Length = 1722
Score = 30.3 bits (65), Expect = 2.8
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = +1
Query: 247 VGPPFXXKXKXXPPXKTRGGXXPXPP 324
VGPP K K P K R G P PP
Sbjct: 113 VGPPVVVKRKRGRPPKNRDGAAPPPP 138
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 30.3 bits (65), Expect = 2.8
Identities = 20/72 (27%), Positives = 20/72 (27%)
Frame = +2
Query: 698 PPXXPPXXXPXXXXXXXXXXXXXPXXPPXPXXXPXXPXSPXXXXPSPPXXXXXXXXXFXX 877
PP PP P P PP P SP P PP
Sbjct: 563 PPPPPPPPPPPPLPQSNYASSQPPPPPPPPPLPNCLVPSPPPPPPPPPILPN------RS 616
Query: 878 XXXPXPXPPXLP 913
P P PP LP
Sbjct: 617 VPPPPPPPPPLP 628
Score = 29.9 bits (64), Expect = 3.6
Identities = 21/74 (28%), Positives = 21/74 (28%), Gaps = 2/74 (2%)
Frame = +2
Query: 698 PPXXPPXXXPXXXXXXXXXXXXXPXXPPXPXXXPXXPXS--PXXXXPSPPXXXXXXXXXF 871
PP PP P P PP P P P S P PP
Sbjct: 544 PPPPPPPPPP----PSGNKPAFSPPPPPPPPPPPPLPQSNYASSQPPPPPPPPPLPNCLV 599
Query: 872 XXXXXPXPXPPXLP 913
P P PP LP
Sbjct: 600 PSPPPPPPPPPILP 613
Score = 29.5 bits (63), Expect = 4.8
Identities = 18/57 (31%), Positives = 18/57 (31%)
Frame = +1
Query: 703 QXPXPPXXXXXXXXXXXXXPPPXXPPXXXXXPXXXXLPLXPXPXPSXXXXXLXPPFP 873
Q P PP PPP PP P P P P P L PP P
Sbjct: 584 QPPPPPPPPPLPNCLVPSPPPP--PPPPPILPNRSVPPPPPPPPPLPNHSVLPPPPP 638
Score = 29.1 bits (62), Expect = 6.4
Identities = 16/58 (27%), Positives = 17/58 (29%)
Frame = +1
Query: 700 PQXPXPPXXXXXXXXXXXXXPPPXXPPXXXXXPXXXXLPLXPXPXPSXXXXXLXPPFP 873
P P PP PPP PP P P P P + PP P
Sbjct: 565 PPPPPPPPPPLPQSNYASSQPPPPPPPPPLPNCLVPSPPPPPPPPPILPNRSVPPPPP 622
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 30.3 bits (65), Expect = 2.8
Identities = 20/72 (27%), Positives = 20/72 (27%)
Frame = +2
Query: 698 PPXXPPXXXPXXXXXXXXXXXXXPXXPPXPXXXPXXPXSPXXXXPSPPXXXXXXXXXFXX 877
PP P P P PP P P SP P PP
Sbjct: 1138 PPPPLPEGPPPLPSDSPPCQPPLPPSPPPATPPPPPPLSPSLPPPPPP-------PPLPS 1190
Query: 878 XXXPXPXPPXLP 913
P P PP LP
Sbjct: 1191 GPPPQPAPPPLP 1202
Score = 28.7 bits (61), Expect = 8.4
Identities = 12/36 (33%), Positives = 14/36 (38%)
Frame = +1
Query: 760 PPPXXPPXXXXXPXXXXLPLXPXPXPSXXXXXLXPP 867
PPP P P LP P P P+ + PP
Sbjct: 1171 PPPPLSPSLPPPPPPPPLPSGPPPQPAPPPLPIQPP 1206
>07_03_0792 -
21541301-21542143,21542426-21542661,21543177-21543373,
21543459-21544173,21544250-21544892,21545970-21546139,
21546442-21546943
Length = 1101
Score = 30.3 bits (65), Expect = 2.8
Identities = 14/40 (35%), Positives = 16/40 (40%)
Frame = +1
Query: 253 PPFXXKXKXXPPXKTRGGXXPXPPGGXGGGXKKXAPPPXI 372
PP PP K+ G P PP G K PPP +
Sbjct: 592 PPAPKAAPPPPPPKSTGPGPPRPPPPAMPGSSKTRPPPPL 631
>01_01_0446 +
3321832-3322232,3322398-3322455,3322810-3323748,
3324504-3324654,3324740-3324818,3325826-3325934
Length = 578
Score = 30.3 bits (65), Expect = 2.8
Identities = 19/69 (27%), Positives = 19/69 (27%)
Frame = -3
Query: 908 GXXXXGXXXXXXGXGGXXXXXXXEGXGXGXRGRXXXXGXXXXXGGXXGGGXXXXXXXXXX 729
G G G GG G G G RG G GG GGG
Sbjct: 60 GGYGGGGVGGGYGGGGGGYGGGGGGYGGGGRGGGGGGGYGGGGGGGRGGGGGGGGRGGGG 119
Query: 728 XXXGGXGXW 702
G G W
Sbjct: 120 RGGGRDGDW 128
>09_02_0495 + 9880714-9881196
Length = 160
Score = 29.9 bits (64), Expect = 3.6
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +1
Query: 433 PPPPXXXXXXXXXXXXXRGGGXXKXGGGXPPPPP 534
PPPP GG GG PPPPP
Sbjct: 51 PPPPPAGSSSSSSSGGGDGGAGGLFGGTYPPPPP 84
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 29.9 bits (64), Expect = 3.6
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = +1
Query: 283 PPXKTRGGXXPXPPGGXGGG 342
PP RGG PPGG GGG
Sbjct: 160 PPGGGRGGALGRPPGGGGGG 179
>06_01_1013 - 7931756-7935109
Length = 1117
Score = 29.9 bits (64), Expect = 3.6
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = -2
Query: 405 PPXKKXXPX*KNXGGGGXFFXPPPXXPRGXXXXPPP 298
P ++ P +N GGGG PP P PPP
Sbjct: 66 PQQQQRRPRRRNHGGGGQRRGPPQERPSAAPPPPPP 101
>04_04_0137 -
23053148-23053798,23053911-23054146,23054268-23054458,
23054587-23056010
Length = 833
Score = 29.5 bits (63), Expect = 4.8
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = -3
Query: 590 PPPPPDXXXVFXXXKKKXXGGGGGXPPPXLXXPPP 486
PPPPP V K G PPP PPP
Sbjct: 371 PPPPPPPPAVTQQQDVKTSCGPAVPPPPPPTPPPP 405
Score = 28.7 bits (61), Expect = 8.4
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = -3
Query: 590 PPPPPDXXXVFXXXKKKXXGGGGGXPPPXLXXPPP 486
PPPPP K G PPP PPP
Sbjct: 372 PPPPPPPAVTQQQDVKTSCGPAVPPPPPPTPPPPP 406
>03_02_0342 - 7645323-7645909,7646323-7646491
Length = 251
Score = 29.5 bits (63), Expect = 4.8
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = +1
Query: 760 PPPXXPPXXXXXPXXXXLPLXPXPXPSXXXXXLXPPFP 873
PPP PP P L P P PS PP P
Sbjct: 176 PPPPRPPAPEYKPPTPTLTPIPTPEPSYGPPAPKPPAP 213
>12_01_0239 -
1793612-1793716,1793808-1793826,1794424-1794599,
1794701-1794747,1795760-1796291
Length = 292
Score = 29.1 bits (62), Expect = 6.4
Identities = 20/78 (25%), Positives = 24/78 (30%)
Frame = -2
Query: 531 GGGGXPPPXFXXXPPPXXXXXXXXXXPXXGGGGFFXXXXWXXPPXKKXXPX*KNXGGGGX 352
GG G PPP + P P P G + P + G GG
Sbjct: 18 GGYGAPPPPYGSSPAP-SAPPYGAKPPKEGKTSSSSAPYYGGGGGYGAPPSTQPYGSGGG 76
Query: 351 FFXPPPXXPRGXXXXPPP 298
+ PP P G PP
Sbjct: 77 YGAPPSSQPYGAPYGAPP 94
>03_02_0455 -
8630543-8630893,8630994-8631068,8631149-8631223,
8631332-8631397,8631891-8631967,8632659-8633070
Length = 351
Score = 29.1 bits (62), Expect = 6.4
Identities = 14/48 (29%), Positives = 14/48 (29%)
Frame = +3
Query: 675 GGXPXXXXPPXPXPXXXXPXXXXXXXPXXXXXXXPPXXXXXXPXPPPP 818
GG P P P P P P PP PPPP
Sbjct: 262 GGPPRPPPPQVPPPPPQAPPPPPPNAPMGMPPRIPPPPVGGTQPPPPP 309
>12_02_1174 - 26696869-26698191
Length = 440
Score = 28.7 bits (61), Expect = 8.4
Identities = 14/51 (27%), Positives = 14/51 (27%)
Frame = +3
Query: 684 PXXXXPPXPXPXXXXPXXXXXXXPXXXXXXXPPXXXXXXPXPPPPXXXXXP 836
P PP P P P P P P PPPP P
Sbjct: 149 PPSLPPPPPPPPPPPPPRPPSVKPPVVQPKPQPPPSLQPPSPPPPPPTRPP 199
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 28.7 bits (61), Expect = 8.4
Identities = 19/73 (26%), Positives = 19/73 (26%), Gaps = 1/73 (1%)
Frame = +2
Query: 698 PPXXPPXXXPXXXXXXXXXXXXXPXXPPXPXXXPXXPXSPXXXXPS-PPXXXXXXXXXFX 874
PP PP P P PP P P P S PP
Sbjct: 59 PPGPPPPHQPQFNFGPGPPQQQQPPPPPQMYYQPPPPPPPYGVNSSQPPPPPPPPPSPPP 118
Query: 875 XXXXPXPXPPXLP 913
P P PP P
Sbjct: 119 SAPPPPPPPPTQP 131
>04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066
Length = 646
Score = 28.7 bits (61), Expect = 8.4
Identities = 14/51 (27%), Positives = 14/51 (27%)
Frame = +3
Query: 684 PXXXXPPXPXPXXXXPXXXXXXXPXXXXXXXPPXXXXXXPXPPPPXXXXXP 836
P PP P P P P PP P PP P P
Sbjct: 418 PYMGAPPPPPPGSYAPVPWGQPPPYASYPPPPPGSSMYNPPPPAPGQATPP 468
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,497,632
Number of Sequences: 37544
Number of extensions: 788626
Number of successful extensions: 3317
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1327
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2773
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3211228900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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